Sequences - Rnomics 📊 Palace

        ☰
    
        Rnomics 📊 Palace
    
                       Back to Rnomics Platform
            
                       Open Session

1 warning:

Access restricted to public data.
Please sign in at Rnomics Platform to access your data.

Navigation

Home

Sequences

Sequence PCBP4.aAug05

CTGTGACCTTGGGCAGGTTACTGATCCTCTCCAGGCATCAGGTTCTCCTGTGTAGTGAATTCATCTGCTCAGCTAACCAGTATGTTAGCTGAGTTCCAGC TGAGCTCAGTATGTTCTGAGCACCTTCTCTGGCCTGGCTCTGAACTGAGCCCTGGGGACATAAGGAGAAGGCAGCAGCCTTGGCTCCTGCTCCAAGGGGC TCCTGGGCTTGGCTGTCCAGAGAAGCAGAAACCAAGCACGTCATCACAAGTGCTTTGATGGGGGAAGTGCAGGCAGCTGGGGGAATGTCTAGCAAGGGCA GCCAGCATGAGGCTGGCCAGGATGCTCGGAGAGCACAGTCCCTGCATCCACTGCTCATCTCCAGCCTCTGGAGTCCCTGTGGCAGAACTCAAATGGAAGG AGGAGCAGCTGCACCCAGGGGAGCAGGGTGTCACCTCCGTTGGATAGAGCCGGCCAGGTTGCAGCGCGGACACACTCGCAGGTCGCTGTGGCCCCAGCCT CGCCTGACAGAATGAGCGGCTCGGACGGGGGACTGGAGGAGGAGCCAGAGCTCAGCATCACCCTCACGCTGCGGATGCTGATGCACGGGAAGGAAGTGGG CAGCATCATCGGGAAGAAGGGCGAGACTGTAAAGCGAATCCGGGAGCAGAGCAGTGCCCGGATCACCATCTCCGAGGGCTCCTGCCCTGAACGCATCACC ACCATCACCGGGTCTACAGCAGCTGTCTTCCATGCAGTCTCCATGATTGCTTTCAAACTGGATGAGGACCTTTGTGCTGCTCCTGCAAATGGTGGAAATG TCTCCAGGCCTCCAGTGACCCTGCGCCTTGTCATCCCTGCCAGTCAGTGTGGCTCACTGATTGGGAAGGCTGGCACCAAGATCAAGGAGATCCGAGAGAC TACGGGTGCCCAGGTACAGGTGGCAGGGGACCTGCTCCCCAACTCCACAGAGCGAGCTGTTACGGTATCTGGGGTGCCTGATGCCATCATCCTGTGTGTG CGCCAGATCTGCGCTGTTATCCTGGAGTCCCCACCCAAAGGAGCCACTATCCCCTACCATCCGAGCCTCTCCCTAGGTACTGTTCTTCTCTCTGCCAACC AGGGCTTCTCTGTCCAGGGTCAGTATGGGGCTGTGACCCCAGCTGAGGTCACCAAGCTCCAGCAGCTCTCAAGCCATGCGGTCCCCTTTGCCACACCCAG CGTGGTGCCAGGACTGGATCCCGGCACACAGACCAGCTCACAGGAGTTCTTGGTTCCCAACGATTTGATTGGCTGTGTGATCGGGCGCCAGGGCAGCAAG ATCAGCGAGATCCGGCAGATGTCAGGGGCACATATCAAGATCGGGAACCAAGCAGAGGGCGCTGGGGAGCGGCATGTCACCATCACTGGCTCTCCGGTCT CCATCGCCCTGGCCCAGTACCTCATCACTGCCTGTCTAGAGACGGCCAAGTCTACCTCTGGGGGGACGCCCAGCTCGGCCCCCGCAGACCTGCCTGCCCC CTTCTCGCCACCCCTGACGGCCCTGCCCACAGCTCCCCCTGGCCTGCTGGGCACACCCTATGCCATCTCCCTCTCCAACTTCATCGGCCTCAAGCCCATG CCCTTCTTGGCTTTACCACCTGCTTCCCCAGGGCCGCCGCCGGGCTTGGCGGCCTACACTGCCAAGATGGCAGCAGCTAATGGGAGCAAGAAGGCTGAGC GGCAGAAATTCTCCCCCTACTGAGGCCAGCTGAGGTACAGGCAGGGGCAGGCAGGACCACCAGCAGGGGGCTGCCTCTGCACCCTACCCGCCCAAGGAGA CTCCACCCTGGGGTCCCAAACGCCGCTAACGCCCAGACGCATGGATGCACCCCCTACCCTGCCTCCATCTATGGGAGTTCTTTCTCTCAGAGTGGGGGCA GTTTCTGGCCCAGGGGTCTGAGCTGCGGCAGCCCCAGGGCAGGGGGCCCTACCTCCTCAGCTCTGTGCTTGGATACAGGGAGCAGCCAGGAGACTCCCTA GTGCCCCCACCATGGCGGGTGTCACTCACGCACTCCCCATCCCTTAGGGCTTCCTGGCCTACTGCATCCTTGTGGGAGTCAGGGAGGAGGGCCCGTTGGG TAGCTGGGGCCAGGCTTCTCTCCCCACCACCTGCAGATTTCTTGCTGCTTCCACTGATACCCTTTTGACTGGAATGAACTGGCTGGGCTTGTCAGGGGGC ACCCCAAAGAGGGGGCACTGCCAGGTAGCTGGGGGAGTGGCATGGGGCAGGGGCCCAGTTCTCAGCAGCAGACACTCTGTACAGTTTTTTCAATCCCTGT TTTTGAATAAATATTCTCAGCGACCAGGAA

PCBP4-3 (forward primer)
PCBP4-4 (reverse primer)
Intron retention

Frame 0

L*PWAGY*SSPGIRFSCVVNSSAQLTSMLAEFQ LSSVCSEHLLWPGSELSPGDIRRRQQPWLLLQGA PGLGCPEKQKPSTSSQVL*WGKCRQLGECLARA ASMRLARMLGEHSPCIHCSSPASGVPVAELKWK EEQLHPGEQGVTSVG*SRPGCSADTLAGRCGPSL A*QNERLGRGTGGGARAQHHPHAADADAREGSG QHHREEGRDCKANPGAEQCPDHHLRGLLP*THH HHHRVYSSCLPCSLHDCFQTG*GPLCCSCKWWKC LQASSDPAPCHPCQSVWLTDWEGWHQDQGDPRD YGCPGTGGRGPAPQLHRASCYGIWGA*CHHPVC APDLRCYPGVPTQRSHYPLPSEPLPRYCSSLCQP GLLCPGSVWGCDPS*GHQAPAALKPCGPLCHTQ RGARTGSRHTDQLTGVLGSQRFDWLCDRAPGQQ DQRDPADVRGTYQDREPSRGRWGAACHHHWLSGL HRPGPVPHHCLSRDGQVYLWGDAQLGPRRPACP LLATPDGPAHSSPWPAGHTLCHLPLQLHRPQAH ALLGFTTCFPRAAAGLGGLHCQDGSS*WEQEG*A AEILPLLRPAEVQAGAGRTTSRGLPLHPTRPRR LHPGVPNAANAQTHGCTPYPASIYGSSFSQSGG SFWPRGLSCGSPRAGGPTSSALCLDTGSSQETP* CPHHGGCHSRTPHPLGLPGLLHPCGSQGGGPVG *LGPGFSPHHLQISCCFH*YPFDWNELAGLVRG HPKEGALPGSWGSGMGQGPSSQQQTLCTVFSIPV FE*IFSATR

Frame 1

CDLGQVTDPLQASGSPV**IHLLS*PVC*LSSS *AQYVLSTFSGLALN*ALGT*GEGSSLGSCSKG LLGLAVQRSRNQARHHKCFDGGSAGSWGNV*QGQ PA*GWPGCSESTVPASTAHLQPLESLWQNSNGR RSSCTQGSRVSPPLDRAGQVAARTHSQVAVAPA SPDRMSGSDGGLEEEPELSITLTLRMLMHGKEVG SIIGKKGETVKRIREQSSARITISEGSCPERIT TITGSTAAVFHAVSMIAFKLDEDLCAAPANGGN VSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRET TGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV RQICAVILESPPKGATIPYHPSLSLGTVLLSAN QGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPS VVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSK ISEIRQMSGAHIKIGNQAEGAGERHVTITGSPV SIALAQYLITACLETAKSTSGGTPSSAPADLPAP FSPPLTALPTAPPGLLGTPYAISLSNFIGLKPM PFLALPPASPGPPPGLAAYTAKMAAANGSKKAE RQKFSPY*GQLRYRQGQAGPPAGGCLCTLPAQGD STLGSQTPLTPRRMDAPPTLPPSMGVLSLRVGA VSGPGV*AAAAPGQGALPPQLCAWIQGAARRLP SAPTMAGVTHALPIP*GFLAYCILVGVREEGPLG SWGQASLPTTCRFLAASTDTLLTGMNWLGLSGG TPKRGHCQVAGGVAWGRGPVLSSRHSVQFFQSL FLNKYSQRPG

Frame 2

VTLGRLLILSRHQVLLCSEFICSANQYVS*VPA ELSMF*APSLAWL*TEPWGHKEKAAALAPAPRG SWAWLSREAETKHVITSALMGEVQAAGGMSSKG SQHEAGQDARRAQSLHPLLISSLWSPCGRTQMEG GAAAPRGAGCHLRWIEPARLQRGHTRRSLWPQP RLTE*AARTGDWRRSQSSASPSRCGC*CTGRKW AASSGRRARL*SESGSRAVPGSPSPRAPALNASP PSPGLQQLSSMQSP*LLSNWMRTFVLLLQMVEM SPGLQ*PCALSSLPVSVAH*LGRLAPRSRRSER LRVPRYRWQGTCSPTPQSELLRYLGCLMPSSCVC ARSALLSWSPHPKEPLSPTIRASP*VLFFSLPT RASLSRVSMGL*PQLRSPSSSSSQAMRSPLPHP AWCQDWIPAHRPAHRSSWFPTI*LAV*SGARAAR SARSGRCQGHISRSGTKQRALGSGMSPSLALRS PSPWPSTSSLPV*RRPSLPLGGRPARPPQTCLP PSRHP*RPCPQLPLACWAHPMPSPSPTSSASSPC PSWLYHLLPQGRRRAWRPTLPRWQQLMGARRLS GRNSPPTEAS*GTGRGRQDHQQGAASAPYPPKE TPPWGPKRR*RPDAWMHPLPCLHLWEFFLSEWGQ FLAQGSELRQPQGRGPYLLSSVLGYREQPGDSL VPPPWRVSLTHSPSLRASWPTASLWESGRRARW VAGARLLSPPPADFLLLPLIPF*LE*TGWACQGA PQRGGTAR*LGEWHGAGAQFSAADTLYSFFNPC F*INILSDQE

Sequence PCBP4.cAug05

AAACCCCTCATTGTTCGCAGCTGATGTCACTCGCAGTTGTGAGCGGCCGCCTCTCCCGGGGACAATGTGGGACTGAGCGGCCCAGCCGCCGTGCCGCCGC CGCCGCCGCCGCAGGACAGCCCCAGCGAGAGCCGGCCAGGTTGCAGCGCGGACACACTCGCAGGTCGCTGTGGCCCCAGCCTCGCCTGACAGAATGAGCG GCTCGGACGGGGGACTGGAGGAGGAGCCAGAGCTCAGCATCACCCTCACGCTGCGGATGCTGATGCACGGGAAGGAAGTGGGCAGCATCATCGGGAAGAA GGGCGAGACTGTAAAGCGAATCCGGGAGCAGAGCAGTGCCCGGATCACCATCTCCGAGGGCTCCTGCCCTGAACGCATCACCACCATCACCGGGTCTACA GCAGCTGTCTTCCATGCAGTCTCCATGATTGCTTTCAAACTGGATGAGGACCTTTGTGCTGCTCCTGCAAATGGTGGAAATGTCTCCAGGCCTCCAGTGA CCCTGCGCCTTGTCATCCCTGCCAGTCAGTGTGGCTCACTGATTGGGAAGGCTGGCACCAAGATCAAGGAGATCCGAGAGACTACGGGTGCCCAGGTACA GGTGGCAGGGGACCTGCTCCCCAACTCCACAGAGCGAGCTGTTACGGTATCTGGGGTGCCTGATGCCATCATCCTGTGTGTGCGCCAGATCTGCGCTGTT ATCCTGGAGTCCCCACCCAAAGGAGCCACTATCCCCTACCATCCGAGCCTCTCCCTAGGTACTGTTCTTCTCTCTGCCAACCAGGGCTTCTCTGTCCAGG GTCAGTATGGGGCTGTGACCCCAGCTGAGGTCACCAAGCTCCAGCAGCTCTCAAGCCATGCGGTCCCCTTTGCCACACCCAGCGTGGTGCCAGGACTGGA TCCCGGCACACAGACCAGCTCACAGGAGTTCTTGGTTCCCAACGATTTGATTGGCTGTGTGATCGGGCGCCAGGGCAGCAAGATCAGCGAGATCCGGCAG ATGTCAGGGGCACATATCAAGATCGGGAACCAAGCAGAGGGCGCTGGGGAGCGGCATGTCACCATCACTGGCTCTCCGGTCTCCATCGCCCTGGCCCAGT ACCTCATCACTGCCTGTCTAGAGACGGCCAAGTCTACCTCTGGGGGGACGCCCAGCTCGGCCCCCGCAGACCTGCCTGCCCCCTTCTCGCCACCCCTGAC GGCCCTGCCCACAGCTCCCCCTGGCCTGCTGGGCACACCCTATGCCATCTCCCTCTCCAACTTCATCGGCCTCAAGCCCATGCCCTTCTTGGCTTTACCA CCTGCTTCCCCAGGGCCGCCGCCGGGCTTGGCGGCCTACACTGCCAAGATGGCAGCAGCTAATGGGAGCAAGAAGGCTGAGCGGCAGAAATTCTCCCCCT ACTGAGGCCAGCTGAGGTACAGGCAGGGGCAGGCAGGACCACCAGCAGGGGGCTGCCTCTGCACCCTACCCGCCCAAGGAGACTCCACCCTGGGGTCCCA AACGCCGCTAACGCCCAGACGCATGGATGCACCCCCTACCCTGCCTCCATCTATGGGAGTTCTTTCTCTCAGAGTGGGGGCAGTTTCTGGCCCAGGGGTC TGAGCTGCGGCAGCCCCAGGGCAGGGGGCCCTACCTCCTCAGCTCTGTGCTTGGATACAGGGAGCAGCCAGGAGACTCCCTAGTGCCCCCACCATGGCGG GTGTCACTCACGCACTCCCCATCCCTTAGGGCTTCCTGGCCTACTGCATCCTTGTGGGAGTCAGGGAGGAGGGCCCGTTGGGTAGCTGGGGCCAGGCTTC TCTCCCCACCACCTGCAGATTTCTTGCTGCTTCCACTGATACCCTTTTGACTGGAATGAACTGGCTGGGCTTGTCAGGGGGCACCCCAAAGAGGGGGCAC TGCCAGGTAGCTGGGGGAGTGGCATGGGGCAGGGGCCCAGTTCTCAGCAGCAGACACTCTGTACAGTTTTTTCAATCCCTGTTTTTGAATAAATATTCTC AGCGACCAGGAA

PCBP4-3 (forward primer)
PCBP4-4 (reverse primer)
Intron retention

Frame 0

KPLIVRS*CHSQL*AAASPGDNVGLSGPAAVPP PPPPQDSPSESRPGCSADTLAGRCGPSLA*QNER LGRGTGGGARAQHHPHAADADAREGSGQHHREE GRDCKANPGAEQCPDHHLRGLLP*THHHHHRVY SSCLPCSLHDCFQTG*GPLCCSCKWWKCLQASSD PAPCHPCQSVWLTDWEGWHQDQGDPRDYGCPGT GGRGPAPQLHRASCYGIWGA*CHHPVCAPDLRC YPGVPTQRSHYPLPSEPLPRYCSSLCQPGLLCPG SVWGCDPS*GHQAPAALKPCGPLCHTQRGARTG SRHTDQLTGVLGSQRFDWLCDRAPGQQDQRDPA DVRGTYQDREPSRGRWGAACHHHWLSGLHRPGPV PHHCLSRDGQVYLWGDAQLGPRRPACPLLATPD GPAHSSPWPAGHTLCHLPLQLHRPQAHALLGFT TCFPRAAAGLGGLHCQDGSS*WEQEG*AAEILPL LRPAEVQAGAGRTTSRGLPLHPTRPRRLHPGVP NAANAQTHGCTPYPASIYGSSFSQSGGSFWPRG LSCGSPRAGGPTSSALCLDTGSSQETP*CPHHGG CHSRTPHPLGLPGLLHPCGSQGGGPVG*LGPGF SPHHLQISCCFH*YPFDWNELAGLVRGHPKEGA LPGSWGSGMGQGPSSQQQTLCTVFSIPVFE*IFS ATR

Frame 1

NPSLFAADVTRSCERPPLPGTMWD*AAQPPCRR RRRRRTAPARAGQVAARTHSQVAVAPASPDRMS GSDGGLEEEPELSITLTLRMLMHGKEVGSIIGKK GETVKRIREQSSARITISEGSCPERITTITGST AAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPV TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQ VAGDLLPNSTERAVTVSGVPDAIILCVRQICAV ILESPPKGATIPYHPSLSLGTVLLSANQGFSVQ GQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLD PGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQ MSGAHIKIGNQAEGAGERHVTITGSPVSIALAQ YLITACLETAKSTSGGTPSSAPADLPAPFSPPLT ALPTAPPGLLGTPYAISLSNFIGLKPMPFLALP PASPGPPPGLAAYTAKMAAANGSKKAERQKFSP Y*GQLRYRQGQAGPPAGGCLCTLPAQGDSTLGSQ TPLTPRRMDAPPTLPPSMGVLSLRVGAVSGPGV *AAAAPGQGALPPQLCAWIQGAARRLPSAPTMA GVTHALPIP*GFLAYCILVGVREEGPLGSWGQAS LPTTCRFLAASTDTLLTGMNWLGLSGGTPKRGH CQVAGGVAWGRGPVLSSRHSVQFFQSLFLNKYS QRPG

Frame 2

TPHCSQLMSLAVVSGRLSRGQCGTERPSRRAAA AAAAGQPQREPARLQRGHTRRSLWPQPRLTE*A ARTGDWRRSQSSASPSRCGC*CTGRKWAASSGR RARL*SESGSRAVPGSPSPRAPALNASPPSPGLQ QLSSMQSP*LLSNWMRTFVLLLQMVEMSPGLQ* PCALSSLPVSVAH*LGRLAPRSRRSERLRVPRY RWQGTCSPTPQSELLRYLGCLMPSSCVCARSALL SWSPHPKEPLSPTIRASP*VLFFSLPTRASLSR VSMGL*PQLRSPSSSSSQAMRSPLPHPAWCQDW IPAHRPAHRSSWFPTI*LAV*SGARAARSARSGR CQGHISRSGTKQRALGSGMSPSLALRSPSPWPS TSSLPV*RRPSLPLGGRPARPPQTCLPPSRHP* RPCPQLPLACWAHPMPSPSPTSSASSPCPSWLYH LLPQGRRRAWRPTLPRWQQLMGARRLSGRNSPP TEAS*GTGRGRQDHQQGAASAPYPPKETPPWGP KRR*RPDAWMHPLPCLHLWEFFLSEWGQFLAQGS ELRQPQGRGPYLLSSVLGYREQPGDSLVPPPWR VSLTHSPSLRASWPTASLWESGRRARWVAGARL LSPPPADFLLLPLIPF*LE*TGWACQGAPQRGGT AR*LGEWHGAGAQFSAADTLYSFFNPCF*INIL SDQE

Sequence PCBP4.eAug05

ATTTCTTTTAGTGTCTCAGGGTAAGGGAAAGGCTAGGTACCTACCATGTATGTGCTTATTGTTTTAATTCTCATCACTCTTTGGAGATGGGAATTTGTAT CCCCTTCTACAGATGGAGAAGCTGAGGCTCAGAGGGTTGAATGGGCTCCCCAGGCTTACACAGCTCGTGAGACACACATAAGCACCCTGGTCAGAGTGAT GTGTGGCGCTCAAGGTCCATGCAGTCTCTTTCCTCTGGGAGTTTGACTAGCCCAGCTCTGGGGTCCCCATGTAAGGGCAGGGGCAGGGTGGACTGGGCTC CTCTCGAACCCCTCTTTGGCTGCCCCTGCCAGAGCCGGCCAGGTTGCAGCGCGGACACACTCGCAGGTCGCTGTGGCCCCAGCCTCGCCTGACAGAATGA GCGGCTCGGACGGGGGACTGGAGGAGGAGCCAGAGCTCAGCATCACCCTCACGCTGCGGATGCTGATGCACGGGAAGGAAGTGGGCAGCATCATCGGGAA GAAGGGCGAGACTGTAAAGCGAATCCGGGAGCAGAGCAGTGCCCGGATCACCATCTCCGAGGGCTCCTGCCCTGAACGCATCACCACCATCACCGGGTCT ACAGCAGCTGTCTTCCATGCAGTCTCCATGATTGCTTTCAAACTGGATGAGGACCTTTGTGCTGCTCCTGCAAATGGTGGAAATGTCTCCAGGCCTCCAG TGACCCTGCGCCTTGTCATCCCTGCCAGTCAGTGTGGCTCACTGATTGGGAAGGCTGGCACCAAGATCAAGGAGATCCGAGAGACTACGGGTGCCCAGGT ACAGGTGGCAGGGGACCTGCTCCCCAACTCCACAGAGCGAGCTGTTACGGTATCTGGGGTGCCTGATGCCATCATCCTGTGTGTGCGCCAGATCTGCGCT GTTATCCTGGAGTCCCCACCCAAAGGAGCCACTATCCCCTACCATCCGAGCCTCTCCCTAGGTACTGTTCTTCTCTCTGCCAACCAGGGCTTCTCTGTCC AGGGTCAGTATGGGGCTGTGACCCCAGCTGAGGTCACCAAGCTCCAGCAGCTCTCAAGCCATGCGGTCCCCTTTGCCACACCCAGCGTGGTGCCAGGACT GGATCCCGGCACACAGACCAGCTCACAGGAGTTCTTGGTTCCCAACGATTTGATTGGCTGTGTGATCGGGCGCCAGGGCAGCAAGATCAGCGAGATCCGG CAGATGTCAGGGGCACATATCAAGATCGGGAACCAAGCAGAGGGCGCTGGGGAGCGGCATGTCACCATCACTGGCTCTCCGGTCTCCATCGCCCTGGCCC AGTACCTCATCACTGCCTGTCTAGAGACGGCCAAGTCTACCTCTGGGGGGACGCCCAGCTCGGCCCCCGCAGACCTGCCTGCCCCCTTCTCGCCACCCCT GACGGCCCTGCCCACAGCTCCCCCTGGCCTGCTGGGCACACCCTATGCCATCTCCCTCTCCAACTTCATCGGCCTCAAGCCCATGCCCTTCTTGGCTTTA CCACCTGCTTCCCCAGGGCCGCCGCCGGGCTTGGCGGCCTACACTGCCAAGATGGCAGCAGCTAATGGGAGCAAGAAGGCTGAGCGGCAGAAATTCTCCC CCTACTGAGGCCAGCTGAGGTACAGGCAGGGGCAGGCAGGACCACCAGCAGGGGGCTGCCTCTGCACCCTACCCGCCCAAGGAGACTCCACCCTGGGGTC CCAAACGCCGCTAACGCCCAGACGCATGGATGCACCCCCTACCCTGCCTCCATCTATGGGAGTTCTTTCTCTCAGAGTGGGGGCAGTTTCTGGCCCAGGG GTCTGAGCTGCGGCAGCCCCAGGGCAGGGGGCCCTACCTCCTCAGCTCTGTGCTTGGATACAGGGAGCAGCCAGGAGACTCCCTAGTGCCCCCACCATGG CGGGTGTCACTCACGCACTCCCCATCCCTTAGGGCTTCCTGGCCTACTGCATCCTTGTGGGAGTCAGGGAGGAGGGCCCGTTGGGTAGCTGGGGCCAGGC TTCTCTCCCCACCACCTGCAGATTTCTTGCTGCTTCCACTGATACCCTTTTGACTGGAATGAACTGGCTGGGCTTGTCAGGGGGCACCCCAAAGAGGGGG CACTGCCAGGTAGCTGGGGGAGTGGCATGGGGCAGGGGCCCAGTTCTCAGCAGCAGACACTCTGTACAGTTTTTTCAATCCCTGTTTTTGAATAAATATT CTCAGCGACCAGGAA

PCBP4-3 (forward primer)
PCBP4-4 (reverse primer)
Intron retention

Frame 0

ISFSVSG*GKG*VPTMYVLIVLILITLWRWEFV SPSTDGEAEAQRVEWAPQAYTARETHISTLVRVM CGAQGPCSLFPLGV*LAQLWGPHVRAGAGWTGL LSNPSLAAPARAGQVAARTHSQVAVAPASPDRM SGSDGGLEEEPELSITLTLRMLMHGKEVGSIIGK KGETVKRIREQSSARITISEGSCPERITTITGS TAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPP VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQV QVAGDLLPNSTERAVTVSGVPDAIILCVRQICA VILESPPKGATIPYHPSLSLGTVLLSANQGFSV QGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGL DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIR QMSGAHIKIGNQAEGAGERHVTITGSPVSIALA QYLITACLETAKSTSGGTPSSAPADLPAPFSPPL TALPTAPPGLLGTPYAISLSNFIGLKPMPFLAL PPASPGPPPGLAAYTAKMAAANGSKKAERQKFS PY*GQLRYRQGQAGPPAGGCLCTLPAQGDSTLGS QTPLTPRRMDAPPTLPPSMGVLSLRVGAVSGPG V*AAAAPGQGALPPQLCAWIQGAARRLPSAPTM AGVTHALPIP*GFLAYCILVGVREEGPLGSWGQA SLPTTCRFLAASTDTLLTGMNWLGLSGGTPKRG HCQVAGGVAWGRGPVLSSRHSVQFFQSLFLNKY SQRPG

Frame 1

FLLVSQGKGKARYLPCMCLLF*FSSLFGDGNLY PLLQMEKLRLRGLNGLPRLTQLVRHT*APWSE* CVALKVHAVSFLWEFD*PSSGVPM*GQGQGGLGS SRTPLWLPLPEPARLQRGHTRRSLWPQPRLTE* AARTGDWRRSQSSASPSRCGC*CTGRKWAASSG RRARL*SESGSRAVPGSPSPRAPALNASPPSPGL QQLSSMQSP*LLSNWMRTFVLLLQMVEMSPGLQ *PCALSSLPVSVAH*LGRLAPRSRRSERLRVPR YRWQGTCSPTPQSELLRYLGCLMPSSCVCARSAL LSWSPHPKEPLSPTIRASP*VLFFSLPTRASLS RVSMGL*PQLRSPSSSSSQAMRSPLPHPAWCQD WIPAHRPAHRSSWFPTI*LAV*SGARAARSARSG RCQGHISRSGTKQRALGSGMSPSLALRSPSPWP STSSLPV*RRPSLPLGGRPARPPQTCLPPSRHP *RPCPQLPLACWAHPMPSPSPTSSASSPCPSWLY HLLPQGRRRAWRPTLPRWQQLMGARRLSGRNSP PTEAS*GTGRGRQDHQQGAASAPYPPKETPPWG PKRR*RPDAWMHPLPCLHLWEFFLSEWGQFLAQG SELRQPQGRGPYLLSSVLGYREQPGDSLVPPPW RVSLTHSPSLRASWPTASLWESGRRARWVAGAR LLSPPPADFLLLPLIPF*LE*TGWACQGAPQRGG TAR*LGEWHGAGAQFSAADTLYSFFNPCF*INI LSDQE

Frame 2

FF*CLRVRERLGTYHVCAYCFNSHHSLEMGICI PFYRWRS*GSEG*MGSPGLHSS*DTHKHPGQSD VWRSRSMQSLSSGSLTSPALGSPCKGRGRVDWA PLEPLFGCPCQSRPGCSADTLAGRCGPSLA*QNE RLGRGTGGGARAQHHPHAADADAREGSGQHHRE EGRDCKANPGAEQCPDHHLRGLLP*THHHHHRV YSSCLPCSLHDCFQTG*GPLCCSCKWWKCLQASS DPAPCHPCQSVWLTDWEGWHQDQGDPRDYGCPG TGGRGPAPQLHRASCYGIWGA*CHHPVCAPDLR CYPGVPTQRSHYPLPSEPLPRYCSSLCQPGLLCP GSVWGCDPS*GHQAPAALKPCGPLCHTQRGART GSRHTDQLTGVLGSQRFDWLCDRAPGQQDQRDP ADVRGTYQDREPSRGRWGAACHHHWLSGLHRPGP VPHHCLSRDGQVYLWGDAQLGPRRPACPLLATP DGPAHSSPWPAGHTLCHLPLQLHRPQAHALLGF TTCFPRAAAGLGGLHCQDGSS*WEQEG*AAEILP LLRPAEVQAGAGRTTSRGLPLHPTRPRRLHPGV PNAANAQTHGCTPYPASIYGSSFSQSGGSFWPR GLSCGSPRAGGPTSSALCLDTGSSQETP*CPHHG GCHSRTPHPLGLPGLLHPCGSQGGGPVG*LGPG FSPHHLQISCCFH*YPFDWNELAGLVRGHPKEG ALPGSWGSGMGQGPSSQQQTLCTVFSIPVFE*IF SATR

Sequence PCBP4.fAug05

CTGTGACCTTGGGCAGGTTACTGATCCTCTCCAGGCATCAGGTTCTCCTGTGTAGTGAATTCATCTGCTCAGCTAACCAGTATGTTAGCTGAGTTCCAGC TGAGCTCAGTATGTTCTGAGCACCTTCTCTGGCCTGGCTCTGAACTGAGCCCTGGGGACATAAGGAGAAGGCAGCAGCCTTGGCTCCTGCTCCAAGGGGC TCCTGGGCTTGGCTGTCCAGAGAAGCAGAAACCAAGCACGTCATCACAAGTGCTTTGATGGGGGAAGTGCAGGCAGCTGGGGGAATGTCTAGCAAGGGCA GCCAGCATGAGGCTGGCCAGGATGCTCGGAGAGCACAGTCCCTGCATCCACTGCTCATCTCCAGCCTCTGGAGTCCCTGTGGCAGAACTCAAATGGAAGG AGGAGCAGCTGCACCCAGGGGAGCAGGGTGTCACCTCCGTTGGATAGAGCCGGCCAGGTTGCAGCGCGGACACACTCGCAGGTCGCTGTGGCCCCAGCCT CGCCTGACAGAATGAGCGGCTCGGACGGGGGACTGGAGGAGGAGCCAGAGCTCAGCATCACCCTCACGCTGCGGATGCTGATGCACGGGAAGGAAGTGGG CAGCATCATCGGGAAGAAGGGCGAGACTGTAAAGCGAATCCGGGAGCAGGTGAGGATGGAGTTTGGGGGAGGAGCCCAGGGCACCTGATGTGGAGGGGAG ATCCCTGCCCCACTTTCTCTCTGAACCACTCCTTCTGGGCTGACCAGTGAGTCCCCCAGAGGGTGGCAGTTTTGAGCCTTGCCTCAGGCCTGGTGAGTGG GGCAGGCAGACAAGTTCCGGCAAGGGAGCAGGGAAGATGCCCCGCTGCCCGGCGCTCATTCTATATCTGCAGAGCAGTGCCCGGATCACCATCTCCGAGG GCTCCTGCCCTGAACGCATCACCACCATCACCGGGTCTACAGCAGCTGTCTTCCATGCAGTCTCCATGATTGCTTTCAAACTGGATGAGGACCTTTGTGC TGCTCCTGCAAATGGTGGAAATGTCTCCAGGCCTCCAGTGACCCTGCGCCTTGTCATCCCTGCCAGTCAGTGTGGCTCACTGATTGGGAAGGCTGGCACC AAGATCAAGGAGATCCGAGAGACTACGGGTGCCCAGGTACAGGTGGCAGGGGACCTGCTCCCCAACTCCACAGAGCGAGCTGTTACGGTATCTGGGGTGC CTGATGCCATCATCCTGTGTGTGCGCCAGATCTGCGCTGTTATCCTGGAGTCCCCACCCAAAGGAGCCACTATCCCCTACCATCCGAGCCTCTCCCTAGG TACTGTTCTTCTCTCTGCCAACCAGGGCTTCTCTGTCCAGGGTCAGTATGGGGCTGTGACCCCAGCTGAGGTCACCAAGCTCCAGCAGCTCTCAAGCCAT GCGGTCCCCTTTGCCACACCCAGCGTGGTGCCAGGACTGGATCCCGGCACACAGACCAGCTCACAGGAGTTCTTGGTTCCCAACGATTTGATTGGCTGTG TGATCGGGCGCCAGGGCAGCAAGATCAGCGAGATCCGGCAGATGTCAGGGGCACATATCAAGATCGGGAACCAAGCAGAGGGCGCTGGGGAGCGGCATGT CACCATCACTGGCTCTCCGGTCTCCATCGCCCTGGCCCAGTACCTCATCACTGCCTGTCTAGAGACGGCCAAGTCTACCTCTGGGGGGACGCCCAGCTCG GCCCCCGCAGACCTGCCTGCCCCCTTCTCGCCACCCCTGACGGCCCTGCCCACAGCTCCCCCTGGCCTGCTGGGCACACCCTATGCCATCTCCCTCTCCA ACTTCATCGGCCTCAAGCCCATGCCCTTCTTGGCTTTACCACCTGCTTCCCCAGGGCCGCCGCCGGGCTTGGCGGCCTACACTGCCAAGATGGCAGCAGC TAATGGGAGCAAGAAGGCTGAGCGGCAGAAATTCTCCCCCTACTGAGGCCAGCTGAGGTACAGGCAGGGGCAGGCAGGACCACCAGCAGGGGGCTGCCTC TGCACCCTACCCGCCCAAGGAGACTCCACCCTGGGGTCCCAAACGCCGCTAACGCCCAGACGCATGGATGCACCCCCTACCCTGCCTCCATCTATGGGAG TTCTTTCTCTCAGAGTGGGGGCAGTTTCTGGCCCAGGGGTCTGAGCTGCGGCAGCCCCAGGGCAGGGGGCCCTACCTCCTCAGCTCTGTGCTTGGATACA GGGAGCAGCCAGGAGACTCCCTAGTGCCCCCACCATGGCGGGTGTCACTCACGCACTCCCCATCCCTTAGGGCTTCCTGGCCTACTGCATCCTTGTGGGA GTCAGGGAGGAGGGCCCGTTGGGTAGCTGGGGCCAGGCTTCTCTCCCCACCACCTGCAGATTTCTTGCTGCTTCCACTGATACCCTTTTGACTGGAATGA ACTGGCTGGGCTTGTCAGGGGGCACCCCAAAGAGGGGGCACTGCCAGGTAGCTGGGGGAGTGGCATGGGGCAGGGGCCCAGTTCTCAGCAGCAGACACTC TGTACAGTTTTTTCAATCCCTGTTTTTGAATAAATATTCTCAGCGACCAGGAA

PCBP4-3 (forward primer)
PCBP4-4 (reverse primer)
Intron retention

Frame 0

L*PWAGY*SSPGIRFSCVVNSSAQLTSMLAEFQ LSSVCSEHLLWPGSELSPGDIRRRQQPWLLLQGA PGLGCPEKQKPSTSSQVL*WGKCRQLGECLARA ASMRLARMLGEHSPCIHCSSPASGVPVAELKWK EEQLHPGEQGVTSVG*SRPGCSADTLAGRCGPSL A*QNERLGRGTGGGARAQHHPHAADADAREGSG QHHREEGRDCKANPGAGEDGVWGRSPGHLMWRG DPCPTFSLNHSFWADQ*VPQRVAVLSLASGLVSG AGRQVPAREQGRCPAARRSFYICRAVPGSPSPR APALNASPPSPGLQQLSSMQSP*LLSNWMRTFV LLLQMVEMSPGLQ*PCALSSLPVSVAH*LGRLAP RSRRSERLRVPRYRWQGTCSPTPQSELLRYLGC LMPSSCVCARSALLSWSPHPKEPLSPTIRASP* VLFFSLPTRASLSRVSMGL*PQLRSPSSSSSQAM RSPLPHPAWCQDWIPAHRPAHRSSWFPTI*LAV *SGARAARSARSGRCQGHISRSGTKQRALGSGM SPSLALRSPSPWPSTSSLPV*RRPSLPLGGRPAR PPQTCLPPSRHP*RPCPQLPLACWAHPMPSPSP TSSASSPCPSWLYHLLPQGRRRAWRPTLPRWQQ LMGARRLSGRNSPPTEAS*GTGRGRQDHQQGAAS APYPPKETPPWGPKRR*RPDAWMHPLPCLHLWE FFLSEWGQFLAQGSELRQPQGRGPYLLSSVLGY REQPGDSLVPPPWRVSLTHSPSLRASWPTASLWE SGRRARWVAGARLLSPPPADFLLLPLIPF*LE* TGWACQGAPQRGGTAR*LGEWHGAGAQFSAADT LYSFFNPCF*INILSDQE

Frame 1

CDLGQVTDPLQASGSPV**IHLLS*PVC*LSSS *AQYVLSTFSGLALN*ALGT*GEGSSLGSCSKG LLGLAVQRSRNQARHHKCFDGGSAGSWGNV*QGQ PA*GWPGCSESTVPASTAHLQPLESLWQNSNGR RSSCTQGSRVSPPLDRAGQVAARTHSQVAVAPA SPDRMSGSDGGLEEEPELSITLTLRMLMHGKEVG SIIGKKGETVKRIREQVRMEFGGGAQGT*CGGE IPAPLSL*TTPSGLTSESPRGWQF*ALPQAW*V GQADKFRQGSREDAPLPGAHSISAEQCPDHHLRG LLP*THHHHHRVYSSCLPCSLHDCFQTG*GPLC CSCKWWKCLQASSDPAPCHPCQSVWLTDWEGWH QDQGDPRDYGCPGTGGRGPAPQLHRASCYGIWGA *CHHPVCAPDLRCYPGVPTQRSHYPLPSEPLPR YCSSLCQPGLLCPGSVWGCDPS*GHQAPAALKP CGPLCHTQRGARTGSRHTDQLTGVLGSQRFDWLC DRAPGQQDQRDPADVRGTYQDREPSRGRWGAAC HHHWLSGLHRPGPVPHHCLSRDGQVYLWGDAQL GPRRPACPLLATPDGPAHSSPWPAGHTLCHLPLQ LHRPQAHALLGFTTCFPRAAAGLGGLHCQDGSS *WEQEG*AAEILPLLRPAEVQAGAGRTTSRGLP LHPTRPRRLHPGVPNAANAQTHGCTPYPASIYGS SFSQSGGSFWPRGLSCGSPRAGGPTSSALCLDT GSSQETP*CPHHGGCHSRTPHPLGLPGLLHPCG SQGGGPVG*LGPGFSPHHLQISCCFH*YPFDWNE LAGLVRGHPKEGALPGSWGSGMGQGPSSQQQTL CTVFSIPVFE*IFSATR

Frame 2

VTLGRLLILSRHQVLLCSEFICSANQYVS*VPA ELSMF*APSLAWL*TEPWGHKEKAAALAPAPRG SWAWLSREAETKHVITSALMGEVQAAGGMSSKG SQHEAGQDARRAQSLHPLLISSLWSPCGRTQMEG GAAAPRGAGCHLRWIEPARLQRGHTRRSLWPQP RLTE*AARTGDWRRSQSSASPSRCGC*CTGRKW AASSGRRARL*SESGSR*GWSLGEEPRAPDVEGR SLPHFLSEPLLLG*PVSPPEGGSFEPCLRPGEW GRQTSSGKGAGKMPRCPALILYLQSSARITISE GSCPERITTITGSTAAVFHAVSMIAFKLDEDLCA APANGGNVSRPPVTLRLVIPASQCGSLIGKAGT KIKEIRETTGAQVQVAGDLLPNSTERAVTVSGV PDAIILCVRQICAVILESPPKGATIPYHPSLSLG TVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSH AVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGC VIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHV TITGSPVSIALAQYLITACLETAKSTSGGTPSS APADLPAPFSPPLTALPTAPPGLLGTPYAISLS NFIGLKPMPFLALPPASPGPPPGLAAYTAKMAAA NGSKKAERQKFSPY*GQLRYRQGQAGPPAGGCL CTLPAQGDSTLGSQTPLTPRRMDAPPTLPPSMG VLSLRVGAVSGPGV*AAAAPGQGALPPQLCAWIQ GAARRLPSAPTMAGVTHALPIP*GFLAYCILVG VREEGPLGSWGQASLPTTCRFLAASTDTLLTGM NWLGLSGGTPKRGHCQVAGGVAWGRGPVLSSRHS VQFFQSLFLNKYSQRPG

Sequence PCBP4.gAug05

ATTTCTTTTAGTGTCTCAGGGTAAGGGAAAGGCTAGGTACCTACCATGTATGTGCTTATTGTTTTAATTCTCATCACTCTTTGGAGATGGGAATTTGTAT CCCCTTCTACAGATGGAGAAGCTGAGGCTCAGAGGGTTGAATGGGCTCCCCAGGCTTACACAGCTCGTGAGACACACATAAGCACCCTGGTCAGAGTGAT GTGTGGCGCTCAAGGTCCATGCAGTCTCTTTCCTCTGGGAGTTTGACTAGCCCAGCTCTGGGGTCCCCATGTAAGGGCAGGGGCAGGGTGGACTGGGCTC CTCTCGAACCCCTCTTTGGCTGCCCCTGCCAGAGCCGGCCAGGTTGCAGCGCGGACACACTCGCAGGTCGCTGTGGCCCCAGCCTCGCCTGACAGAATGA GCGGCTCGGACGGGGGACTGGAGGAGGAGCCAGAGCTCAGCATCACCCTCACGCTGCGGATGCTGATGCACGGGAAGGAAGTGGGCAGCATCATCGGGAA GAAGGGCGAGACTGTAAAGCGAATCCGGGAGCAGGTGAGGATGGAGTTTGGGGGAGGAGCCCAGGGCACCTGATGTGGAGGGGAGATCCCTGCCCCACTT TCTCTCTGAACCACTCCTTCTGGGCTGACCAGTGAGTCCCCCAGAGGGTGGCAGTTTTGAGCCTTGCCTCAGGCCTGGTGAGTGGGGCAGGCAGACAAGT TCCGGCAAGGGAGCAGGGAAGATGCCCCGCTGCCCGGCGCTCATTCTATATCTGCAGAGCAGTGCCCGGATCACCATCTCCGAGGGCTCCTGCCCTGAAC GCATCACCACCATCACCGGGTCTACAGCAGCTGTCTTCCATGCAGTCTCCATGATTGCTTTCAAACTGGATGAGGACCTTTGTGCTGCTCCTGCAAATGG TGGAAATGTCTCCAGGCCTCCAGTGACCCTGCGCCTTGTCATCCCTGCCAGTCAGTGTGGCTCACTGATTGGGAAGGCTGGCACCAAGATCAAGGAGATC CGAGAGACTACGGGTGCCCAGGTACAGGTGGCAGGGGACCTGCTCCCCAACTCCACAGAGCGAGCTGTTACGGTATCTGGGGTGCCTGATGCCATCATCC TGTGTGTGCGCCAGATCTGCGCTGTTATCCTGGAGTCCCCACCCAAAGGAGCCACTATCCCCTACCATCCGAGCCTCTCCCTAGGTACTGTTCTTCTCTC TGCCAACCAGGGCTTCTCTGTCCAGGGTCAGTATGGGGCTGTGACCCCAGCTGAGGTCACCAAGCTCCAGCAGCTCTCAAGCCATGCGGTCCCCTTTGCC ACACCCAGCGTGGTGCCAGGACTGGATCCCGGCACACAGACCAGCTCACAGGAGTTCTTGGTTCCCAACGATTTGATTGGCTGTGTGATCGGGCGCCAGG GCAGCAAGATCAGCGAGATCCGGCAGATGTCAGGGGCACATATCAAGATCGGGAACCAAGCAGAGGGCGCTGGGGAGCGGCATGTCACCATCACTGGCTC TCCGGTCTCCATCGCCCTGGCCCAGTACCTCATCACTGCCTGTCTAGAGACGGCCAAGTCTACCTCTGGGGGGACGCCCAGCTCGGCCCCCGCAGACCTG CCTGCCCCCTTCTCGCCACCCCTGACGGCCCTGCCCACAGCTCCCCCTGGCCTGCTGGGCACACCCTATGCCATCTCCCTCTCCAACTTCATCGGCCTCA AGCCCATGCCCTTCTTGGCTTTACCACCTGCTTCCCCAGGGCCGCCGCCGGGCTTGGCGGCCTACACTGCCAAGATGGCAGCAGCTAATGGGAGCAAGAA GGCTGAGCGGCAGAAATTCTCCCCCTACTGAGGCCAGCTGAGGTACAGGCAGGGGCAGGCAGGACCACCAGCAGGGGGCTGCCTCTGCACCCTACCCGCC CAAGGAGACTCCACCCTGGGGTCCCAAACGCCGCTAACGCCCAGACGCATGGATGCACCCCCTACCCTGCCTCCATCTATGGGAGTTCTTTCTCTCAGAG TGGGGGCAGTTTCTGGCCCAGGGGTCTGAGCTGCGGCAGCCCCAGGGCAGGGGGCCCTACCTCCTCAGCTCTGTGCTTGGATACAGGGAGCAGCCAGGAG ACTCCCTAGTGCCCCCACCATGGCGGGTGTCACTCACGCACTCCCCATCCCTTAGGGCTTCCTGGCCTACTGCATCCTTGTGGGAGTCAGGGAGGAGGGC CCGTTGGGTAGCTGGGGCCAGGCTTCTCTCCCCACCACCTGCAGATTTCTTGCTGCTTCCACTGATACCCTTTTGACTGGAATGAACTGGCTGGGCTTGT CAGGGGGCACCCCAAAGAGGGGGCACTGCCAGGTAGCTGGGGGAGTGGCATGGGGCAGGGGCCCAGTTCTCAGCAGCAGACACTCTGTACAGTTTTTTCA ATCCCTGTTTTTGAATAAATATTCTCAGCGACCAGGAA

PCBP4-3 (forward primer)
PCBP4-4 (reverse primer)
Intron retention

Frame 0

ISFSVSG*GKG*VPTMYVLIVLILITLWRWEFV SPSTDGEAEAQRVEWAPQAYTARETHISTLVRVM CGAQGPCSLFPLGV*LAQLWGPHVRAGAGWTGL LSNPSLAAPARAGQVAARTHSQVAVAPASPDRM SGSDGGLEEEPELSITLTLRMLMHGKEVGSIIGK KGETVKRIREQVRMEFGGGAQGT*CGGEIPAPL SL*TTPSGLTSESPRGWQF*ALPQAW*VGQADK FRQGSREDAPLPGAHSISAEQCPDHHLRGLLP*T HHHHHRVYSSCLPCSLHDCFQTG*GPLCCSCKW WKCLQASSDPAPCHPCQSVWLTDWEGWHQDQGD PRDYGCPGTGGRGPAPQLHRASCYGIWGA*CHHP VCAPDLRCYPGVPTQRSHYPLPSEPLPRYCSSL CQPGLLCPGSVWGCDPS*GHQAPAALKPCGPLC HTQRGARTGSRHTDQLTGVLGSQRFDWLCDRAPG QQDQRDPADVRGTYQDREPSRGRWGAACHHHWL SGLHRPGPVPHHCLSRDGQVYLWGDAQLGPRRP ACPLLATPDGPAHSSPWPAGHTLCHLPLQLHRPQ AHALLGFTTCFPRAAAGLGGLHCQDGSS*WEQE G*AAEILPLLRPAEVQAGAGRTTSRGLPLHPTR PRRLHPGVPNAANAQTHGCTPYPASIYGSSFSQS GGSFWPRGLSCGSPRAGGPTSSALCLDTGSSQE TP*CPHHGGCHSRTPHPLGLPGLLHPCGSQGGG PVG*LGPGFSPHHLQISCCFH*YPFDWNELAGLV RGHPKEGALPGSWGSGMGQGPSSQQQTLCTVFS IPVFE*IFSATR

Frame 1

FLLVSQGKGKARYLPCMCLLF*FSSLFGDGNLY PLLQMEKLRLRGLNGLPRLTQLVRHT*APWSE* CVALKVHAVSFLWEFD*PSSGVPM*GQGQGGLGS SRTPLWLPLPEPARLQRGHTRRSLWPQPRLTE* AARTGDWRRSQSSASPSRCGC*CTGRKWAASSG RRARL*SESGSR*GWSLGEEPRAPDVEGRSLPHF LSEPLLLG*PVSPPEGGSFEPCLRPGEWGRQTS SGKGAGKMPRCPALILYLQSSARITISEGSCPE RITTITGSTAAVFHAVSMIAFKLDEDLCAAPANG GNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEI RETTGAQVQVAGDLLPNSTERAVTVSGVPDAII LCVRQICAVILESPPKGATIPYHPSLSLGTVLLS ANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFA TPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQ GSKISEIRQMSGAHIKIGNQAEGAGERHVTITGS PVSIALAQYLITACLETAKSTSGGTPSSAPADL PAPFSPPLTALPTAPPGLLGTPYAISLSNFIGL KPMPFLALPPASPGPPPGLAAYTAKMAAANGSKK AERQKFSPY*GQLRYRQGQAGPPAGGCLCTLPA QGDSTLGSQTPLTPRRMDAPPTLPPSMGVLSLR VGAVSGPGV*AAAAPGQGALPPQLCAWIQGAARR LPSAPTMAGVTHALPIP*GFLAYCILVGVREEG PLGSWGQASLPTTCRFLAASTDTLLTGMNWLGL SGGTPKRGHCQVAGGVAWGRGPVLSSRHSVQFFQ SLFLNKYSQRPG

Frame 2

FF*CLRVRERLGTYHVCAYCFNSHHSLEMGICI PFYRWRS*GSEG*MGSPGLHSS*DTHKHPGQSD VWRSRSMQSLSSGSLTSPALGSPCKGRGRVDWA PLEPLFGCPCQSRPGCSADTLAGRCGPSLA*QNE RLGRGTGGGARAQHHPHAADADAREGSGQHHRE EGRDCKANPGAGEDGVWGRSPGHLMWRGDPCPT FSLNHSFWADQ*VPQRVAVLSLASGLVSGAGRQV PAREQGRCPAARRSFYICRAVPGSPSPRAPALN ASPPSPGLQQLSSMQSP*LLSNWMRTFVLLLQM VEMSPGLQ*PCALSSLPVSVAH*LGRLAPRSRRS ERLRVPRYRWQGTCSPTPQSELLRYLGCLMPSS CVCARSALLSWSPHPKEPLSPTIRASP*VLFFS LPTRASLSRVSMGL*PQLRSPSSSSSQAMRSPLP HPAWCQDWIPAHRPAHRSSWFPTI*LAV*SGAR AARSARSGRCQGHISRSGTKQRALGSGMSPSLA LRSPSPWPSTSSLPV*RRPSLPLGGRPARPPQTC LPPSRHP*RPCPQLPLACWAHPMPSPSPTSSAS SPCPSWLYHLLPQGRRRAWRPTLPRWQQLMGAR RLSGRNSPPTEAS*GTGRGRQDHQQGAASAPYPP KETPPWGPKRR*RPDAWMHPLPCLHLWEFFLSE WGQFLAQGSELRQPQGRGPYLLSSVLGYREQPG DSLVPPPWRVSLTHSPSLRASWPTASLWESGRRA RWVAGARLLSPPPADFLLLPLIPF*LE*TGWAC QGAPQRGGTAR*LGEWHGAGAQFSAADTLYSFF NPCF*INILSDQE

Sequence PCBP4.hAug05

AAACCCCTCATTGTTCGCAGCTGATGTCACTCGCAGTTGTGAGCGGCCGCCTCTCCCGGGGACAATGTGGGACTGAGCGGCCCAGCCGCCGTGCCGCCGC CGCCGCCGCCGCAGGACAGCCCCAGCGAGGCCATTTCCAGCACATAGAAGAGAGATTGGAAACCAACGTGCAGAACTGCCAGTCCCCTGACACGCTGTGC CCCACCCACTGCAGCCCAGTGCTGAATGAACCCTGCCCAGAGGTGTCTGTAGTGAGCTTCTGCCCTAGTGACTTTTGAGCCGGCCAGGTTGCAGCGCGGA CACACTCGCAGGTCGCTGTGGCCCCAGCCTCGCCTGACAGAATGAGCGGCTCGGACGGGGGACTGGAGGAGGAGCCAGAGCTCAGCATCACCCTCACGCT GCGGATGCTGATGCACGGGAAGGAAGTGGGCAGCATCATCGGGAAGAAGGGCGAGACTGTAAAGCGAATCCGGGAGCAGAGCAGTGCCCGGATCACCATC TCCGAGGGCTCCTGCCCTGAACGCATCACCACCATCACCGGGTCTACAGCAGCTGTCTTCCATGCAGTCTCCATGATTGCTTTCAAACTGGATGAGGACC TTTGTGCTGCTCCTGCAAATGGTGGAAATGTCTCCAGGCCTCCAGTGACCCTGCGCCTTGTCATCCCTGCCAGTCAGTGTGGCTCACTGATTGGGAAGGC TGGCACCAAGATCAAGGAGATCCGAGAGACTACGGGTGCCCAGGTACAGGTGGCAGGGGACCTGCTCCCCAACTCCACAGAGCGAGCTGTTACGGTATCT GGGGTGCCTGATGCCATCATCCTGTGTGTGCGCCAGATCTGCGCTGTTATCCTGGAGTCCCCACCCAAAGGAGCCACTATCCCCTACCATCCGAGCCTCT CCCTAGGTACTGTTCTTCTCTCTGCCAACCAGGGCTTCTCTGTCCAGGGTCAGTATGGGGCTGTGACCCCAGCTGAGGTCACCAAGCTCCAGCAGCTCTC AAGCCATGCGGTCCCCTTTGCCACACCCAGCGTGGTGCCAGGACTGGATCCCGGCACACAGACCAGCTCACAGGAGTTCTTGGTTCCCAACGATTTGATT GGCTGTGTGATCGGGCGCCAGGGCAGCAAGATCAGCGAGATCCGGCAGATGTCAGGGGCACATATCAAGATCGGGAACCAAGCAGAGGGCGCTGGGGAGC GGCATGTCACCATCACTGGCTCTCCGGTCTCCATCGCCCTGGCCCAGTACCTCATCACTGCCTGGGCCGCCGCCGGGCTTGGCGGCCTACACTGCCAAGA TGGCAGCAGCTAATGGGAGCAAGAAGGCTGAGCGGCAGAAATTCTCCCCCTACTGAGGCCAGCTGAGGTACAGGCAGGGGCAGGCAGGACCACCAGCAGG GGGCTGCCTCTGCACCCTACCCGCCCAAGGAGACTCCACCCTGGGGTCCCAAACGCCGCTAACGCCCAGACGCATGGATGCACCCCCTACCCTGCCTCCA TCTATGGGAGTTCTTTCTCTCAGAGTGGGGGCAGTTTCTGGCCCAGGGGTCTGAGCTGCGGCAGCCCCAGGGCAGGGGGCCCTACCTCCTCAGCTCTGTG CTTGGATACAGGGAGCAGCCAGGAGACTCCCTAGTGCCCCCACCATGGCGGGTGTCACTCACGCACTCCCCATCCCTTAGGGCTTCCTGGCCTACTGCAT CCTTGTGGGAGTCAGGGAGGAGGGCCCGTTGGGTAGCTGGGGCCAGGCTTCTCTCCCCACCACCTGCAGATTTCTTGCTGCTTCCACTGATACCCTTTTG ACTGGAATGAACTGGCTGGGCTTGTCAGGGGGCACCCCAAAGAGGGGGCACTGCCAGGTAGCTGGGGGAGTGGCATGGGGCAGGGGCCCAGTTCTCAGCA GCAGACACTCTGTACAGTTTTTTCAATCCCTGTTTTTGAATAAATATTCTCAGCGACCAGGAA

PCBP4-3 (forward primer)
PCBP4-4 (reverse primer)
Intron retention

Frame 0

KPLIVRS*CHSQL*AAASPGDNVGLSGPAAVPP PPPPQDSPSEAISST*KRDWKPTCRTASPLTRCA PPTAAQC*MNPAQRCL**ASALVTFEPARLQRG HTRRSLWPQPRLTE*AARTGDWRRSQSSASPSR CGC*CTGRKWAASSGRRARL*SESGSRAVPGSPS PRAPALNASPPSPGLQQLSSMQSP*LLSNWMRT FVLLLQMVEMSPGLQ*PCALSSLPVSVAH*LGR LAPRSRRSERLRVPRYRWQGTCSPTPQSELLRYL GCLMPSSCVCARSALLSWSPHPKEPLSPTIRAS P*VLFFSLPTRASLSRVSMGL*PQLRSPSSSSS QAMRSPLPHPAWCQDWIPAHRPAHRSSWFPTI*L AV*SGARAARSARSGRCQGHISRSGTKQRALGS GMSPSLALRSPSPWPSTSSLPGPPPGLAAYTAK MAAANGSKKAERQKFSPY*GQLRYRQGQAGPPAG GCLCTLPAQGDSTLGSQTPLTPRRMDAPPTLPP SMGVLSLRVGAVSGPGV*AAAAPGQGALPPQLC AWIQGAARRLPSAPTMAGVTHALPIP*GFLAYCI LVGVREEGPLGSWGQASLPTTCRFLAASTDTLL TGMNWLGLSGGTPKRGHCQVAGGVAWGRGPVLS SRHSVQFFQSLFLNKYSQRPG

Frame 1

NPSLFAADVTRSCERPPLPGTMWD*AAQPPCRR RRRRRTAPARPFPAHRREIGNQRAELPVP*HAV PHPLQPSAE*TLPRGVCSELLP**LLSRPGCSAD TLAGRCGPSLA*QNERLGRGTGGGARAQHHPHA ADADAREGSGQHHREEGRDCKANPGAEQCPDHH LRGLLP*THHHHHRVYSSCLPCSLHDCFQTG*GP LCCSCKWWKCLQASSDPAPCHPCQSVWLTDWEG WHQDQGDPRDYGCPGTGGRGPAPQLHRASCYGI WGA*CHHPVCAPDLRCYPGVPTQRSHYPLPSEPL PRYCSSLCQPGLLCPGSVWGCDPS*GHQAPAAL KPCGPLCHTQRGARTGSRHTDQLTGVLGSQRFD WLCDRAPGQQDQRDPADVRGTYQDREPSRGRWGA ACHHHWLSGLHRPGPVPHHCLGRRRAWRPTLPR WQQLMGARRLSGRNSPPTEAS*GTGRGRQDHQQ GAASAPYPPKETPPWGPKRR*RPDAWMHPLPCLH LWEFFLSEWGQFLAQGSELRQPQGRGPYLLSSV LGYREQPGDSLVPPPWRVSLTHSPSLRASWPTA SLWESGRRARWVAGARLLSPPPADFLLLPLIPF* LE*TGWACQGAPQRGGTAR*LGEWHGAGAQFSA ADTLYSFFNPCF*INILSDQE

Frame 2

TPHCSQLMSLAVVSGRLSRGQCGTERPSRRAAA AAAAGQPQRGHFQHIEERLETNVQNCQSPDTLC PTHCSPVLNEPCPEVSVVSFCPSDF*AGQVAAR THSQVAVAPASPDRMSGSDGGLEEEPELSITLTL RMLMHGKEVGSIIGKKGETVKRIREQSSARITI SEGSCPERITTITGSTAAVFHAVSMIAFKLDED LCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKA GTKIKEIRETTGAQVQVAGDLLPNSTERAVTVS GVPDAIILCVRQICAVILESPPKGATIPYHPSL SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLS SHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLI GCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGE RHVTITGSPVSIALAQYLITAWAAAGLGGLHCQD GSS*WEQEG*AAEILPLLRPAEVQAGAGRTTSR GLPLHPTRPRRLHPGVPNAANAQTHGCTPYPAS IYGSSFSQSGGSFWPRGLSCGSPRAGGPTSSALC LDTGSSQETP*CPHHGGCHSRTPHPLGLPGLLH PCGSQGGGPVG*LGPGFSPHHLQISCCFH*YPF DWNELAGLVRGHPKEGALPGSWGSGMGQGPSSQQ QTLCTVFSIPVFE*IFSATR

Sequence PCBP4.lAug05

AAACCCCTCATTGTTCGCAGCTGATGTCACTCGCAGTTGTGAGCGGCCGCCTCTCCCGGGGACAATGTGGGACTGAGCGGCCCAGCCGCCGTGCCGCCGC CGCCGCCGCCGCAGGACAGCCCCAGCGAGAGCCGGCCAGGTTGCAGCGCGGACACACTCGCAGGTCGCTGTGGCCCCAGCCTCGCCTGACAGAATGAGCG GCTCGGACGGGGGACTGGAGGAGGAGCCAGAGCTCAGCATCACCCTCACGCTGCGGATGCTGATGCACGGGAAGGAAGTGGGCAGCATCATCGGGAAGAA GGGCGAGACTGTAAAGCGAATCCGGGAGCAGTGCCCGGATCACCATCTCCGAGGGCTCCTGCCCTGAACGCATCACCACCATCACCGGGTCTACAGCAGC TGTCTTCCATGCAGTCTCCATGATTGCTTTCAAACTGGATGAGGACCTTTGTGCTGCTCCTGCAAATGGTGGAAATGTCTCCAGGCCTCCAGTGACCCTG CGCCTTGTCATCCCTGCCAGTCAGTGTGGCTCACTGATTGGGAAGGCTGGCACCAAGATCAAGGAGATCCGAGAGACTACGGGTGCCCAGGTACAGGTGG CAGGGGACCTGCTCCCCAACTCCACAGAGCGAGCTGTTACGGTATCTGGGGTGCCTGATGCCATCATCCTGTGTGTGCGCCAGATCTGCGCTGTTATCCT GGAGTCCCCACCCAAAGGAGCCACTATCCCCTACCATCCGAGCCTCTCCCTAGGTACTGTTCTTCTCTCTGCCAACCAGGGCTTCTCTGTCCAGGGTCAG TATGGGGCTGTGACCCCAGCTGAGGTCACCAAGCTCCAGCAGCTCTCAAGCCATGCGGTCCCCTTTGCCACACCCAGCGTGGTGCCAGGACTGGATCCCG GCACACAGACCAGCTCACAGGAGTTCTTGGTTCCCAACGATGTGAGCAGGGGATGGGATGGCTGGAGGGGCAGCAAGATCAGCGAGATCCGGCAGATGTC AGGGGCACATATCAAGATCGGGAACCAAGCAGAGGGCGCTGGGGAGCGGCATGTCACCATCACTGGCTCTCCGGTCTCCATCGCCCTGGCCCAGTACCTC ATCACTGCCTGGTGAGCGCGGGCTGGGCGGCAGTGGGGGAGCAGGTCACGGTTCTCATGTGCCCAAGAAAGGCAGGGGTGGGGAGAGGAAGCTGGCCTCC TCTCTCTGTCTGGGCCCGACCTCTGCCTCTCCTAACCCTACTCCAATTCCCCATGGTCTTTGCCTAATTCACCCTCTGTTGCCCCATCTCCCCCCTCTAT ATCCACCTCTCATTCTCCATTGCTGTGTCTTTTCCCTGGGTCTCTGGCCACCCCATTTCTCCCTGCACCTCGTGCTATATCTGCTTGTCCTTTCTTCCCT TCCTCTTCCACCTTTCCCATCTTCCCCTTATTGTTCTCTGTTCACTACCTCTCTCTTGCCTTTCATCTAATCTCATGCCCATCTCTGCCCTCATTGCCCC TCTCTCACTCCCACTTTCCCCTTTGTCTCCCCTCTATATCCCTCTCTCCAGTCTAGAGACGGCCAAGTCTACCTCTGGGGGGACGCCCAGCTCGGCCCCC GCAGACCTGCCTGCCCCCTTCTCGCCACCCCTGACGGCCCTGCCCACAGCTCCCCCTGGCCTGCTGGGCACACCCTATGCCATCTCCCTCTCCAACTTCA TCGGCCTCAAGCCCATGCCCTTCTTGGCTTTACCACCTGCTTCCCCAGGGCCGCCGCCGGGCTTGGCGGCCTACACTGCCAAGATGGCAGCAGCTAATGG GAGCAAGAAGGCTGAGCGGCAGAAATTCTCCCCCTACTGAGGCCAGCTGAGGTACAGGCAGGGGCAGGCAGGACCACCAGCAGGGGGCTGCCTCTGCACC CTACCCGCCCAAGGAGACTCCACCCTGGGGTCCCAAACGCCGCTAACGCCCAGACGCATGGATGCACCCCCTACCCTGCCTCCATCTATGGGAGTTCTTT CTCTCAGAGTGGGGGCAGTTTCTGGCCCAGGGGTCTGAGCTGCGGCAGCCCCAGGGCAGGGGGCCCTACCTCCTCAGCTCTGTGCTTGGATACAGGGAGC AGCCAGGAGACTCCCTAGTGCCCCCACCATGGCGGGTGTCACTCACGCACTCCCCATCCCTTAGGGCTTCCTGGCCTACTGCATCCTTGTGGGAGTCAGG GAGGAGGGCCCGTTGGGTAGCTGGGGCCAGGCTTCTCTCCCCACCACCTGCAGATTTCTTGCTGCTTCCACTGATACCCTTTTGACTGGAATGAACTGGC TGGGCTTGTCAGGGGGCACCCCAAAGAGGGGGCACTGCCAGGTAGCTGGGGGAGTGGCATGGGGCAGGGGCCCAGTTCTCAGCAGCAGACACTCTGTACA GTTTTTTCAATCCCTGTTTTTGAATA

PCBP4-3 (forward primer)
PCBP4-4 (reverse primer)
Intron retention

Frame 0

KPLIVRS*CHSQL*AAASPGDNVGLSGPAAVPP PPPPQDSPSESRPGCSADTLAGRCGPSLA*QNER LGRGTGGGARAQHHPHAADADAREGSGQHHREE GRDCKANPGAVPGSPSPRAPALNASPPSPGLQQ LSSMQSP*LLSNWMRTFVLLLQMVEMSPGLQ*PC ALSSLPVSVAH*LGRLAPRSRRSERLRVPRYRW QGTCSPTPQSELLRYLGCLMPSSCVCARSALLS WSPHPKEPLSPTIRASP*VLFFSLPTRASLSRVS MGL*PQLRSPSSSSSQAMRSPLPHPAWCQDWIP AHRPAHRSSWFPTM*AGDGMAGGAARSARSGRC QGHISRSGTKQRALGSGMSPSLALRSPSPWPSTS SLPGERGLGGSGGAGHGSHVPKKGRGGERKLAS SLCLGPTSASPNPTPIPHGLCLIHPLLPHLPPL YPPLILHCCVFSLGLWPPHFSLHLVLYLLVLSSL PLPPFPSSPYCSLFTTSLLPFI*SHAHLCPHCP SLTPTFPFVSPLYPSLQSRDGQVYLWGDAQLGP RRPACPLLATPDGPAHSSPWPAGHTLCHLPLQLH RPQAHALLGFTTCFPRAAAGLGGLHCQDGSS*W EQEG*AAEILPLLRPAEVQAGAGRTTSRGLPLH PTRPRRLHPGVPNAANAQTHGCTPYPASIYGSSF SQSGGSFWPRGLSCGSPRAGGPTSSALCLDTGS SQETP*CPHHGGCHSRTPHPLGLPGLLHPCGSQ GGGPVG*LGPGFSPHHLQISCCFH*YPFDWNELA GLVRGHPKEGALPGSWGSGMGQGPSSQQQTLCT VFSIPVFE

Frame 1

NPSLFAADVTRSCERPPLPGTMWD*AAQPPCRR RRRRRTAPARAGQVAARTHSQVAVAPASPDRMS GSDGGLEEEPELSITLTLRMLMHGKEVGSIIGKK GETVKRIREQCPDHHLRGLLP*THHHHHRVYSS CLPCSLHDCFQTG*GPLCCSCKWWKCLQASSDP APCHPCQSVWLTDWEGWHQDQGDPRDYGCPGTGG RGPAPQLHRASCYGIWGA*CHHPVCAPDLRCYP GVPTQRSHYPLPSEPLPRYCSSLCQPGLLCPGS VWGCDPS*GHQAPAALKPCGPLCHTQRGARTGSR HTDQLTGVLGSQRCEQGMGWLEGQQDQRDPADV RGTYQDREPSRGRWGAACHHHWLSGLHRPGPVP HHCLVSAGWAAVGEQVTVLMCPRKAGVGRGSWPP LSVWARPLPLLTLLQFPMVFA*FTLCCPISPLY IHLSFSIAVSFPWVSGHPISPCTSCYICLSFLP FLFHLSHLPLIVLCSLPLSCLSSNLMPISALIAP LSLPLSPLSPLYIPLSSLETAKSTSGGTPSSAP ADLPAPFSPPLTALPTAPPGLLGTPYAISLSNF IGLKPMPFLALPPASPGPPPGLAAYTAKMAAANG SKKAERQKFSPY*GQLRYRQGQAGPPAGGCLCT LPAQGDSTLGSQTPLTPRRMDAPPTLPPSMGVL SLRVGAVSGPGV*AAAAPGQGALPPQLCAWIQGA ARRLPSAPTMAGVTHALPIP*GFLAYCILVGVR EEGPLGSWGQASLPTTCRFLAASTDTLLTGMNW LGLSGGTPKRGHCQVAGGVAWGRGPVLSSRHSVQ FFQSLFLN

Frame 2

TPHCSQLMSLAVVSGRLSRGQCGTERPSRRAAA AAAAGQPQREPARLQRGHTRRSLWPQPRLTE*A ARTGDWRRSQSSASPSRCGC*CTGRKWAASSGR RARL*SESGSSARITISEGSCPERITTITGSTAA VFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTL RLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV AGDLLPNSTERAVTVSGVPDAIILCVRQICAVIL ESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQ YGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDP GTQTSSQEFLVPNDVSRGWDGWRGSKISEIRQMS GAHIKIGNQAEGAGERHVTITGSPVSIALAQYL ITAW*ARAGRQWGSRSRFSCAQERQGWGEEAGL LSLSGPDLCLS*PYSNSPWSLPNSPSVAPSPPSI STSHSPLLCLFPGSLATPFLPAPRAISACPFFP SSSTFPIFPLLFSVHYLSLAFHLISCPSLPSLP LSHSHFPLCLPSISLSPV*RRPSLPLGGRPARPP QTCLPPSRHP*RPCPQLPLACWAHPMPSPSPTS SASSPCPSWLYHLLPQGRRRAWRPTLPRWQQLM GARRLSGRNSPPTEAS*GTGRGRQDHQQGAASAP YPPKETPPWGPKRR*RPDAWMHPLPCLHLWEFF LSEWGQFLAQGSELRQPQGRGPYLLSSVLGYRE QPGDSLVPPPWRVSLTHSPSLRASWPTASLWESG RRARWVAGARLLSPPPADFLLLPLIPF*LE*TG WACQGAPQRGGTAR*LGEWHGAGAQFSAADTLY SFFNPCF*I

Sequence PCBP4.mAug05

AAACCCCTCATTGTTCGCAGCTGATGTCACTCGCAGTTGTGAGCGGCCGCCTCTCCCGGGGACAATGTGGGACTGAGCGGCCCAGCCGCCGTGCCGCCGC CGCCGCCGCCGCAGGACAGCCCCAGCGAGCCTCTGGAGTCCCTGTGGCAGAACTCAAATGGAAGGAGGAGCAGCTGCACCCAGGGGAGCAGGGTGTCACC TCCGTTGGATAGGCCATTTCCAGCACATAGAAGAGAGATTGGAAACCAACGTGCAGAACTGCCAGTCCCCTGACACGCTGTGCCCCACCCACTGCAGCCC AGTGCTGAATGAACCCTGCCCAGAGGTGTCTGTAGTGAGCTTCTGCCCTAGTGACTTTTGAGCCGGCCAGGTTGCAGCGCGGACACACTCGCAGGTCGCT GTGGCCCCAGCCTCGCCTGACAGAATGAGCGGCTCGGACGGGGGACTGGAGGAGGAGCCAGAGCTCAGCATCACCCTCACGCTGCGGATGCTGATGCACG GGAAGGAAGTGGGCAGCATCATCGGGAAGAAGGGCGAGACTGTAAAGCGAATCCGGGAGCAGTGCCCGGATCACCATCTCCGAGGGCTCCTGCCCTGAAC GCATCACCACCATCACCGGGTCTACAGCAGCTGTCTTCCATGCAGTCTCCATGATTGCTTTCAAACTGGATGAGGACCTTTGTGCTGCTCCTGCAAATGG TGGAAATGTCTCCAGGCCTCCAGTGACCCTGCGCCTTGTCATCCCTGCCAGTCAGTGTGGCTCACTGATTGGGAAGGCTGGCACCAAGATCAAGGAGATC CGAGAGACTACGGGTGCCCAGGTACAGGTGGCAGGGGACCTGCTCCCCAACTCCACAGAGCGAGCTGTTACGGTATCTGGGGTGCCTGATGCCATCATCC TGTGTGTGCGCCAGATCTGCGCTGTTATCCTGGAGTCCCCACCCAAAGGAGCCACTATCCCCTACCATCCGAGCCTCTCCCTAGGTACTGTTCTTCTCTC TGCCAACCAGGGCTTCTCTGTCCAGGGTCAGTATGGGGCTGTGACCCCAGCTGAGGTCACCAAGCTCCAGCAGCTCTCAAGCCATGCGGTCCCCTTTGCC ACACCCAGCGTGGTGCCAGGACTGGATCCCGGCACACAGACCAGCTCACAGGAGTTCTTGGTTCCCAACGATTTGATTGGCTGTGTGATCGGGCGCCAGG GCAGCAAGATCAGCGAGATCCGGCAGATGTCAGGGGCACATATCAAGATCGGGAACCAAGCAGAGGGCGCTGGGGAGCGGCATGTCACCATCACTGGCTC TCCGGTCTCCATCGCCCTGGCCCAGTACCTCATCACTGCCTGGTGAGCGCGGGCTGGGCGGCAGTGGGGGAGCAGGTCACGGTTCTCATGTGCCCAAGAA AGGCAGGGGTGGGGAGAGGAAGCTGGCCTCCTCTCTCTGTCTGGGCCCGACCTCTGCCTCTCCTAACCCTACTCCAATTCCCCATGGTCTTTGCCTAATT CACCCTCTGTTGCCCCATCTCCCCCCTCTATATCCACCTCTCATTCTCCATTGCTGTGTCTTTTCCCTGGGTCTCTGGCCACCCCATTTCTCCCTGCACC TCGTGCTATATCTGCTTGTCCTTTCTTCCCTTCCTCTTCCACCTTTCCCATCTTCCCCTTATTGTTCTCTGTTCACTACCTCTCTCTTGCCTTTCATCTA ATCTCATGCCCATCTCTGCCCTCATTGCCCCTCTCTCACTCCCACTTTCCCCTTTGTCTCCCCTCTATATCCCTCTCTCCAGTCTAGAGACGGCCAAGTC TACCTCTGGGGGGACGCCCAGCTCGGCCCCCGCAGACCTGCCTGCCCCCTTCTCGCCACCCCTGACGGCCCTGCCCACAGCTCCCCCTGGCCTGCTGGGC ACACCCTATGCCATCTCCCTCTCCAACTTCATCGGCCTCAAGCCCATGCCCTTCTTGGCTTTACCACCTGCTTCCCCAGGGCCGCCGCCGGGCTTGGCGG CCTACACTGCCAAGATGGCAGCAGCTAATGGGAGCAAGAAGGCTGAGCGGCAGAAATTCTCCCCCTACTGAGGCCAGCTGAGGTACAGGCAGGGGCAGGC AGGACCACCAGCAGGGGGCTGCCTCTGCACCCTACCCGCCCAAGGAGACTCCACCCTGGGGTCCCAAACGCCGCTAACGCCCAGACGCATGGATGCACCC CCTACCCTGCCTCCATCTATGGGAGTTCTTTCTCTCAGAGTGGGGGCAGTTTCTGGCCCAGGGGTCTGAGCTGCGGCAGCCCCAGGGCAGGGGGCCCTAC CTCCTCAGCTCTGTGCTTGGATACAGGGAGCAGCCAGGAGACTCCCTAGTGCCCCCACCATGGCGGGTGTCACTCACGCACTCCCCATCCCTTAGGGCTT CCTGGCCTACTGCATCCTTGTGGGAGTCAGGGAGGAGGGCCCGTTGGGTAGCTGGGGCCAGGCTTCTCTCCCCACCACCTGCAGATTTCTTGCTGCTTCC ACTGATACCCTTTTGACTGGAATGAACTGGCTGGGCTTGTCAGGGGGCACCCCAAAGAGGGGGCACTGCCAGGTAGCTGGGGGAGTGGCATGGGGCAGGG GCCCAGTTCTCAGCAGCAGACACTCTGTACAGTTTTTTCAATCCCTGTTTTTGAATA

PCBP4-3 (forward primer)
PCBP4-4 (reverse primer)
Intron retention

Frame 0

KPLIVRS*CHSQL*AAASPGDNVGLSGPAAVPP PPPPQDSPSEPLESLWQNSNGRRSSCTQGSRVSP PLDRPFPAHRREIGNQRAELPVP*HAVPHPLQP SAE*TLPRGVCSELLP**LLSRPGCSADTLAGR CGPSLA*QNERLGRGTGGGARAQHHPHAADADAR EGSGQHHREEGRDCKANPGAVPGSPSPRAPALN ASPPSPGLQQLSSMQSP*LLSNWMRTFVLLLQM VEMSPGLQ*PCALSSLPVSVAH*LGRLAPRSRRS ERLRVPRYRWQGTCSPTPQSELLRYLGCLMPSS CVCARSALLSWSPHPKEPLSPTIRASP*VLFFS LPTRASLSRVSMGL*PQLRSPSSSSSQAMRSPLP HPAWCQDWIPAHRPAHRSSWFPTI*LAV*SGAR AARSARSGRCQGHISRSGTKQRALGSGMSPSLA LRSPSPWPSTSSLPGERGLGGSGGAGHGSHVPKK GRGGERKLASSLCLGPTSASPNPTPIPHGLCLI HPLLPHLPPLYPPLILHCCVFSLGLWPPHFSLH LVLYLLVLSSLPLPPFPSSPYCSLFTTSLLPFI* SHAHLCPHCPSLTPTFPFVSPLYPSLQSRDGQV YLWGDAQLGPRRPACPLLATPDGPAHSSPWPAG HTLCHLPLQLHRPQAHALLGFTTCFPRAAAGLGG LHCQDGSS*WEQEG*AAEILPLLRPAEVQAGAG RTTSRGLPLHPTRPRRLHPGVPNAANAQTHGCT PYPASIYGSSFSQSGGSFWPRGLSCGSPRAGGPT SSALCLDTGSSQETP*CPHHGGCHSRTPHPLGL PGLLHPCGSQGGGPVG*LGPGFSPHHLQISCCF H*YPFDWNELAGLVRGHPKEGALPGSWGSGMGQG PSSQQQTLCTVFSIPVFE

Frame 1

NPSLFAADVTRSCERPPLPGTMWD*AAQPPCRR RRRRRTAPASLWSPCGRTQMEGGAAAPRGAGCH LRWIGHFQHIEERLETNVQNCQSPDTLCPTHCSP VLNEPCPEVSVVSFCPSDF*AGQVAARTHSQVA VAPASPDRMSGSDGGLEEEPELSITLTLRMLMH GKEVGSIIGKKGETVKRIREQCPDHHLRGLLP*T HHHHHRVYSSCLPCSLHDCFQTG*GPLCCSCKW WKCLQASSDPAPCHPCQSVWLTDWEGWHQDQGD PRDYGCPGTGGRGPAPQLHRASCYGIWGA*CHHP VCAPDLRCYPGVPTQRSHYPLPSEPLPRYCSSL CQPGLLCPGSVWGCDPS*GHQAPAALKPCGPLC HTQRGARTGSRHTDQLTGVLGSQRFDWLCDRAPG QQDQRDPADVRGTYQDREPSRGRWGAACHHHWL SGLHRPGPVPHHCLVSAGWAAVGEQVTVLMCPR KAGVGRGSWPPLSVWARPLPLLTLLQFPMVFA*F TLCCPISPLYIHLSFSIAVSFPWVSGHPISPCT SCYICLSFLPFLFHLSHLPLIVLCSLPLSCLSS NLMPISALIAPLSLPLSPLSPLYIPLSSLETAKS TSGGTPSSAPADLPAPFSPPLTALPTAPPGLLG TPYAISLSNFIGLKPMPFLALPPASPGPPPGLA AYTAKMAAANGSKKAERQKFSPY*GQLRYRQGQA GPPAGGCLCTLPAQGDSTLGSQTPLTPRRMDAP PTLPPSMGVLSLRVGAVSGPGV*AAAAPGQGAL PPQLCAWIQGAARRLPSAPTMAGVTHALPIP*GF LAYCILVGVREEGPLGSWGQASLPTTCRFLAAS TDTLLTGMNWLGLSGGTPKRGHCQVAGGVAWGR GPVLSSRHSVQFFQSLFLN

Frame 2

TPHCSQLMSLAVVSGRLSRGQCGTERPSRRAAA AAAAGQPQRASGVPVAELKWKEEQLHPGEQGVT SVG*AISST*KRDWKPTCRTASPLTRCAPPTAA QC*MNPAQRCL**ASALVTFEPARLQRGHTRRSL WPQPRLTE*AARTGDWRRSQSSASPSRCGC*CT GRKWAASSGRRARL*SESGSSARITISEGSCPE RITTITGSTAAVFHAVSMIAFKLDEDLCAAPANG GNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEI RETTGAQVQVAGDLLPNSTERAVTVSGVPDAII LCVRQICAVILESPPKGATIPYHPSLSLGTVLLS ANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFA TPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQ GSKISEIRQMSGAHIKIGNQAEGAGERHVTITGS PVSIALAQYLITAW*ARAGRQWGSRSRFSCAQE RQGWGEEAGLLSLSGPDLCLS*PYSNSPWSLPN SPSVAPSPPSISTSHSPLLCLFPGSLATPFLPAP RAISACPFFPSSSTFPIFPLLFSVHYLSLAFHL ISCPSLPSLPLSHSHFPLCLPSISLSPV*RRPS LPLGGRPARPPQTCLPPSRHP*RPCPQLPLACWA HPMPSPSPTSSASSPCPSWLYHLLPQGRRRAWR PTLPRWQQLMGARRLSGRNSPPTEAS*GTGRGR QDHQQGAASAPYPPKETPPWGPKRR*RPDAWMHP LPCLHLWEFFLSEWGQFLAQGSELRQPQGRGPY LLSSVLGYREQPGDSLVPPPWRVSLTHSPSLRA SWPTASLWESGRRARWVAGARLLSPPPADFLLLP LIPF*LE*TGWACQGAPQRGGTAR*LGEWHGAG AQFSAADTLYSFFNPCF*I

Sequence PCBP4.bAug05

ATTTCTTTTAGTGTCTCAGGGTAAGGGAAAGGCTAGGTACCTACCATGTATGTGCTTATTGTTTTAATTCTCATCACTCTTTGGAGATGGGAATTTGTAT CCCCTTCTACAGATGGAGAAGCTGAGGCTCAGAGGGTTGAATGGGCTCCCCAGGCTTACACAGCTCGTGAGACACACATAAGCACCCTGGTCAGAGTGAT GTGTGGCGCTCAAGGTCCATGCAGTCTCTTTCCTCTGGGAGTTTGACTAGCCCAGCTCTGGGGTCCCCATGTAAGGGCAGGGGCAGGGTGGACTGGGCTC CTCTCGAACCCCTCTTTGGCTGCCCCTGCCAGAGCCGGCCAGGTTGCAGCGCGGACACACTCGCAGGTCGCTGTGGCCCCAGCCTCGCCTGACAGAATGA GCGGCTCGGACGGGGGACTGGAGGAGGAGCCAGAGCTCAGCATCACCCTCACGCTGCGGATGCTGATGCACGGGAAGGAAGTGGGCAGCATCATCGGGAA GAAGGGCGAGACTGTAAAGCGAATCCGGGAGCAGGTGAGGATGGAGTTTGGGGGAGGAGCCCAGGGCACCTGATGTGGAGGGGAGATCCCTGCCCCACTT TCTCTCTGAACCACTCCTTCTGGGCTGACCAGTGAGTCCCCCAGAGGGTGGCAGTTTTGAGCCTTGCCTCAGGCCTGGTGAGTGGGGCAGGCAGACAAGT TCCGGCAAGGGAGCAGGGAAGATGCCCCGCTGCCCGGCGCTCATTCTATATCTGCAGAGCAGTGCCCGGATCACCATCTCCGAGGGCTCCTGCCCTGAAC GCATCACCACCATCACCGGGTCTACAGCAGCTGTCTTCCATGCAGTCTCCATGATTGCTTTCAAACTGGATGAGGACCTTTGTGCTGCTCCTGCAAATGG TGGAAATGTCTCCAGGCCTCCAGTGACCCTGCGCCTTGTCATCCCTGCCAGTCAGTGTGGCTCACTGATTGGGAAGGCTGGCACCAAGATCAAGGAGATC CGAGAGGTGAGGGGCGAGATATACCACCCACAGGGAATCCGGGGCAAGGGAGCAGTTGTAAGAGGGGTGTTGGGCTTATGGCGTCCTCCCCACCTAGAGA GCTCTGAGCCTGGGCAGCCCTTTTCTGGGTTATGGGAGCAGCCAGAAGTGGCCCCTGTTCTCTGTTTGCAGACTACGGGTGCCCAGGTACAGGTGGCAGG GGACCTGCTCCCCAACTCCACAGAGCGAGCTGTTACGGTATCTGGGGTGCCTGATGCCATCATCCTGTGTGTGCGCCAGATCTGCGCTGTTATCCTGGAG TCCCCACCCAAAGGAGCCACTATCCCCTACCATCCGAGCCTCTCCCTAGGTACTGTTCTTCTCTCTGCCAACCAGGGCTTCTCTGTCCAGGGTCAGTATG GGGCTGTGACCCCAGCTGAGGTCACCAAGCTCCAGCAGCTCTCAAGCCATGCGGTCCCCTTTGCCACACCCAGCGTGGTGCCAGGACTGGATCCCGGCAC ACAGACCAGCTCACAGGAGTTCTTGGTTCCCAACGATTTGATTGGCTGTGTGATCGGGCGCCAGGGCAGCAAGATCAGCGAGATCCGGCAGATGTCAGGG GCACATATCAAGATCGGGAACCAAGCAGAGGGCGCTGGGGAGCGGCATGTCACCATCACTGGCTCTCCGGTCTCCATCGCCCTGGCCCAGTACCTCATCA CTGCCTGTCTAGAGACGGCCAAGTCTACCTCTGGGGGGACGCCCAGCTCGGCCCCCGCAGACCTGCCTGCCCCCTTCTCGCCACCCCTGACGGCCCTGCC CACAGCTCCCCCTGGCCTGCTGGGCACACCCTATGCCATCTCCCTCTCCAACTTCATCGGCCTCAAGCCCATGCCCTTCTTGGCTTTACCACCTGCTTCC CCAGGGCCGCCGCCGGGCTTGGCGGCCTACACTGCCAAGATGGCAGCAGCTAATGGGAGCAAGAAGGCTGAGCGGCAGAAATTCTCCCCCTACTGAGGCC AGCTGAGGTACAGGCAGGGGCAGGCAGGACCACCAGCAGGGGGCTGCCTCTGCACCCTACCCGCCCAAGGAGACTCCACCCTGGGGTCCCAAACGCCGCT AACGCCCAGACGCATGGATGCACCCCCTACCCTGCCTCCATCTATGGGAGTTCTTTCTCTCAGAGTGGGGGCAGTTTCTGGCCCAGGGGTCTGAGCTGCG GCAGCCCCAGGGCAGGGGGCCCTACCTCCTCAGCTCTGTGCTTGGATACAGGGAGCAGCCAGGAGACTCCCTAGTGCCCCCACCATGGCGGGTGTCACTC ACGCACTCCCCATCCCTTAGGGCTTCCTGGCCTACTGCATCCTTGTGGGAGTCAGGGAGGAGGGCCCGTTGGGTAGCTGGGGCCAGGCTTCTCTCCCCAC CACCTGCAGATTTCTTGCTGCTTCCACTGATACCCTTTTGACTGGAATGAACTGGCTGGGCTTGTCAGGGGGCACCCCAAAGAGGGGGCACTGCCAGGTA GCTGGGGGAGTGGCATGGGGCAGGGGCCCAGTTCTCAGCAGCAGACACTCTGTACAGTTTTTTCAATCCCTGTTTTTGAATAAATATTCTCAGCGACCAG GAA

PCBP4-3 (forward primer)
PCBP4-4 (reverse primer)
Intron retention

Frame 0

ISFSVSG*GKG*VPTMYVLIVLILITLWRWEFV SPSTDGEAEAQRVEWAPQAYTARETHISTLVRVM CGAQGPCSLFPLGV*LAQLWGPHVRAGAGWTGL LSNPSLAAPARAGQVAARTHSQVAVAPASPDRM SGSDGGLEEEPELSITLTLRMLMHGKEVGSIIGK KGETVKRIREQVRMEFGGGAQGT*CGGEIPAPL SL*TTPSGLTSESPRGWQF*ALPQAW*VGQADK FRQGSREDAPLPGAHSISAEQCPDHHLRGLLP*T HHHHHRVYSSCLPCSLHDCFQTG*GPLCCSCKW WKCLQASSDPAPCHPCQSVWLTDWEGWHQDQGD PRGEGRDIPPTGNPGQGSSCKRGVGLMASSPPRE L*AWAALFWVMGAARSGPCSLFADYGCPGTGGR GPAPQLHRASCYGIWGA*CHHPVCAPDLRCYPG VPTQRSHYPLPSEPLPRYCSSLCQPGLLCPGSVW GCDPS*GHQAPAALKPCGPLCHTQRGARTGSRH TDQLTGVLGSQRFDWLCDRAPGQQDQRDPADVR GTYQDREPSRGRWGAACHHHWLSGLHRPGPVPHH CLSRDGQVYLWGDAQLGPRRPACPLLATPDGPA HSSPWPAGHTLCHLPLQLHRPQAHALLGFTTCF PRAAAGLGGLHCQDGSS*WEQEG*AAEILPLLRP AEVQAGAGRTTSRGLPLHPTRPRRLHPGVPNAA NAQTHGCTPYPASIYGSSFSQSGGSFWPRGLSC GSPRAGGPTSSALCLDTGSSQETP*CPHHGGCHS RTPHPLGLPGLLHPCGSQGGGPVG*LGPGFSPH HLQISCCFH*YPFDWNELAGLVRGHPKEGALPG SWGSGMGQGPSSQQQTLCTVFSIPVFE*IFSATR

Frame 1

FLLVSQGKGKARYLPCMCLLF*FSSLFGDGNLY PLLQMEKLRLRGLNGLPRLTQLVRHT*APWSE* CVALKVHAVSFLWEFD*PSSGVPM*GQGQGGLGS SRTPLWLPLPEPARLQRGHTRRSLWPQPRLTE* AARTGDWRRSQSSASPSRCGC*CTGRKWAASSG RRARL*SESGSR*GWSLGEEPRAPDVEGRSLPHF LSEPLLLG*PVSPPEGGSFEPCLRPGEWGRQTS SGKGAGKMPRCPALILYLQSSARITISEGSCPE RITTITGSTAAVFHAVSMIAFKLDEDLCAAPANG GNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEI REVRGEIYHPQGIRGKGAVVRGVLGLWRPPHLE SSEPGQPFSGLWEQPEVAPVLCLQTTGAQVQVAG DLLPNSTERAVTVSGVPDAIILCVRQICAVILE SPPKGATIPYHPSLSLGTVLLSANQGFSVQGQY GAVTPAEVTKLQQLSSHAVPFATPSVVPGLDPGT QTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSG AHIKIGNQAEGAGERHVTITGSPVSIALAQYLI TACLETAKSTSGGTPSSAPADLPAPFSPPLTALP TAPPGLLGTPYAISLSNFIGLKPMPFLALPPAS PGPPPGLAAYTAKMAAANGSKKAERQKFSPY*G QLRYRQGQAGPPAGGCLCTLPAQGDSTLGSQTPL TPRRMDAPPTLPPSMGVLSLRVGAVSGPGV*AA AAPGQGALPPQLCAWIQGAARRLPSAPTMAGVT HALPIP*GFLAYCILVGVREEGPLGSWGQASLPT TCRFLAASTDTLLTGMNWLGLSGGTPKRGHCQV AGGVAWGRGPVLSSRHSVQFFQSLFLNKYSQRP G

Frame 2

FF*CLRVRERLGTYHVCAYCFNSHHSLEMGICI PFYRWRS*GSEG*MGSPGLHSS*DTHKHPGQSD VWRSRSMQSLSSGSLTSPALGSPCKGRGRVDWA PLEPLFGCPCQSRPGCSADTLAGRCGPSLA*QNE RLGRGTGGGARAQHHPHAADADAREGSGQHHRE EGRDCKANPGAGEDGVWGRSPGHLMWRGDPCPT FSLNHSFWADQ*VPQRVAVLSLASGLVSGAGRQV PAREQGRCPAARRSFYICRAVPGSPSPRAPALN ASPPSPGLQQLSSMQSP*LLSNWMRTFVLLLQM VEMSPGLQ*PCALSSLPVSVAH*LGRLAPRSRRS ER*GARYTTHRESGAREQL*EGCWAYGVLPT*R ALSLGSPFLGYGSSQKWPLFSVCRLRVPRYRWQ GTCSPTPQSELLRYLGCLMPSSCVCARSALLSWS PHPKEPLSPTIRASP*VLFFSLPTRASLSRVSM GL*PQLRSPSSSSSQAMRSPLPHPAWCQDWIPA HRPAHRSSWFPTI*LAV*SGARAARSARSGRCQG HISRSGTKQRALGSGMSPSLALRSPSPWPSTSS LPV*RRPSLPLGGRPARPPQTCLPPSRHP*RPC PQLPLACWAHPMPSPSPTSSASSPCPSWLYHLLP QGRRRAWRPTLPRWQQLMGARRLSGRNSPPTEA S*GTGRGRQDHQQGAASAPYPPKETPPWGPKRR *RPDAWMHPLPCLHLWEFFLSEWGQFLAQGSELR QPQGRGPYLLSSVLGYREQPGDSLVPPPWRVSL THSPSLRASWPTASLWESGRRARWVAGARLLSP PPADFLLLPLIPF*LE*TGWACQGAPQRGGTAR* LGEWHGAGAQFSAADTLYSFFNPCF*INILSDQ E