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Sequences

Sequence BRCA1.pAug05

GTACCTTGATTTCGTATTCTGAGAGGCTGCTGCTTAGCGGTAGCCCCTTGGTTTCCGTGGCAACGGAAAAGCGCGGGAATTACAGATAAATTAAAACTGC
GACTGCGCGGCGTGAGCTCGCTGAGACTTCCTGGACGGGGGACAGGCTGTGGGGTTTCTCAGATAACTGGGCCCCTGCGCTCAGGAGGCCTTCACCCTCT
GCTCTGGGTAAAGTTCATTGGAACAGAAAGAAATGGATTTATCTGCTCTTCGCGTTGAAGAAGTACAAAATGTCATTAATGCTATGCAGAAAATCTTAGA
GTGTCCCATCTGTCTGGAGTTGATCAAGGAACCTGTCTCCACAAAGTGTGACCACATATTTTGCAAATTTTGCATGCTGAAACTTCTCAACCAGAAGAAA
GGGCCTTCACAGTGTCCTTTATGTAAGAATGATATAACCAAAAGGAGCCTACAAGAAAGTACGAGATTTAGTCAACTTGTTGAAGAGCTATTGAAAATCA
TTTGTGCTTTTCAGCTTGACACAGGTTTGGAGTATGCAAACAGCTATAATTTTGCAAAAAAGGAAAATAACTCTCCTGAACATCTAAAAGATGAAGTTTC
TATCATCCAAAGTATGGGCTACAGAAACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGCAGGAAACCAGTCTCAGTGTCCAACTC
TCT
AACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGGATACAACCTCAAAAGACGTCTGTCTACATTGAATTGGGTGAAGCAGCATCTGGGTGTG
AGAGTGAAACAAGCGTCTCTGAAGACTGCTCAGGGCTATCCTCTCAGAGTGACATTTTAACCACTCAGCAGAGGGATACCATGCAACATAACCTGATAAA
GCTCCAGCAGGAAATGGCTGAACTAGAAGCTGTGTTAGAACAGCATGGGAGCCAGCCTTCTAACAGCTACCCTTCCATCATAAGTGACTCTTCTGCCCTT
GAGGACCTGCGAAATCCAGAACAAAGCACATCAGAAAAAGCAGTATTAACTTCACAGAAAAGTAGTGAATACCCTATAAGCCAGAATCCAGAAGGCCTTT
CTGCTGACAAGTTTGAGGTGTCTGCAGATAGTTCTACCAGTAAAAATAAAGAACCAGGAGTGGAAAGGTCATCCCCTTCTAAATGCCCATCATTAGATGA
TAGGTGGTACATGCACAGTTGCTCTGGGAGTCTTCAGAATAGAAACTACCCATCTCAAGAGGAGCTCATTAAGGTTGTTGATGTGGAGGAGCAACAGCTG
GAAGAGTCTGGGCCACACGATTTGACGGAAACATCTTACTTGCCAAGGCAAGATCTAGAGGGAACCCCTTACCTGGAATCTGGAATCAGCCTCTTCTCTG
ATGACCCTGAATCTGATCCTTCTGAAGACAGAGCCCCAGAGTCAGCTCGTGTTGGCAACATACCATCTTCAACCTCTGCATTGAAAGTTCCCCAATTGAA
AGTTGCAGAATCTGCCCAGAGTCCAGCTGCTGCTCATACTACTGATACTGCTGGGTATAATGCAATGGAAGAAAGTGTGAGCAGGGAGAAGCCAGAATTG
ACAGCTTCAACAGAAAGGGTCAACAAAAGAATGTCCATGGTGGTGTCTGGCCTGACCCCAGAAGAATTTATGCTCGTGTACAAGTTTGCCAGAAAACACC
ACATCACTTTAACTAATCTAATTACTGAAGAGACTACTCATGTTGTTATGAAAACAGATGCTGAGTTTGTGTGTGAACGGACACTGAAATATTTTCTAGG
AATTGCGGGAGGAAAATGGGTAGTTAGCTATTTCTGGGTGACCCAGTCTATTAAAGAAAGAAAAATGCTGAATGAGCATGATTTTGAAGTCAGAGGAGAT
GTGGTCAATGGAAGAAACCACCAAGGTCCAAAGCGAGCAAGAGAATCCCAGGACAGAAAGATCTTCAGGGGGCTAGAAATCTGTTGCTATGGGCCCTTCA
CCAACATGCCCACAGATCAACTGGAATGGATGGTACAGCTGTGTGGTGCTTCTGTGGTGAAGGAGCTTTCATCATTCACCCTTGGCACAGGTGTCCACCC
AATTGTGGTTGTGCAGCCAGATGCCTGGACAGAGGACAATGGCTTCCATGCAATTGGGCAGATGTGTGAGGCACCTGTGGTGACCCGAGAGTGGGTGTTG
GACAGTGTAGCACTCTACCAGTGCCAGGAGCTGGACACCTACCTGATACCCCAGATCCCCCACAGCCACTACTGACTGCAGCCAGCCACAGGTACAGAGC
CACAGGACCCCAAGAATGAGCTTACAAAGTGGCCTTTCCAGGCCCTGGGAGCTCCTCTCACTCTTCAGTCCTTCTACTGTCCTGGCTACTAAATATTTTA
TGTACATCAGCCTGAAAAGGACTTCTGGCTATGCAAGGGTCCCTTAAAGATTTTCTGCTTGAAGTCTCCCTTGGAAATCTGCCATGAGCACAAAATTATG
GTAATTTTTCACCTGAGAAGATTTTAAAACCATTTAAACGCCACCAATTGAGCAAGATGCTGATTCATTATTTATCAGCCCTATTCTTTCTATTCAGGCT
GTTGTTGGCTTAGGGCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCTCTAAAACCCTGTGTTCACAAAGGCAG
AGAGTCAGACCCTTCAATGGAAGGAGAGTGCTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGTTCTCAAATGTTGGAGTGGAACAT
TGGGGAGGAAATTCTGAGGCAGGTATTAGAAATGAAAAGGAAACTTGAAACCTGGGCATGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAG
GTGGGCAGATCACTGGAGGTCAGGAGTTCGAAACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAGAAATTAGCCGGTCATGGTGGT
GGACACCTGTAATCCCAGCTACTCAGGTGGCTAAGGCAGGAGAATCACTTCAGCCCGGGAGGTGGAGGTTGCAGTGAGCCAAGATCATACCACGGCACTC
CAGCCTGGGTGACAGTGAGACTGTGGCTCAAAAAAAAAAAAAAAAAAAGGAAAATGAAACTAGAAGAGATTTCTAAAAGTCTGAGATATATTTGCTAGAT
TTCTAAAGAATGTGTTCTAAAACAGCAGAAGATTTTCAAGAACCGGTTTCCAAAGACAGTCTTCTAATTCCTCATTAGTAATAAGTAAAATGTTTATTGT
TGTAGCTCTGGTATATAATCCATTCCTCTTAAAATATAAGACCTCTGGCATGAATATTTCATATCTATAAAATGACAGATCCCACCAGGAAGGAAGCTGT
TGCTTTCTTTGAGGTGATTTTTTTCCTTTGCTCCCTGTTGCTGAAACCATACAGCTTCATAAATAATTTTGCTTGCTGAAGGAAGAAAAAGTGTTTTTCA
TAAACCCATTATCCAGGACTGTTTATAGCTGTTGGAAGGACTAGGTCTTCCCTAGCCCCCCCAGTGTGCAAGGGCAGTGAAGACTTGATTGTACAAAATA
CGTTTTGTAAATGTTGTGCTGTTAACACTGCAAATAAACTTGGTAGCAAACACTTCCA
  • BRCA1-F2 (forward primer)
  • BRCA1-R2 (reverse primer)
  • Multiple exon skipping

Frame 0

VP*FRILRGCCLAVAPWFPWQRKSAGITDKLKL
RLRGVSSLRLPGRGTGCGVSQITGPLRSGGLHPL
LWVKFIGTERNGFICSSR*RSTKCH*CYAENLR
VSHLSGVDQGTCLHKV*PHILQILHAETSQPEE
RAFTVSFM*E*YNQKEPTRKYEI*STC*RAIENH
LCFSA*HRFGVCKQL*FCKKGK*LS*TSKR*SF
YHPKYGLQKPCQKTSTE*TRKSFLAGNQSQCPT
L
*PWNCENSEDKAADTTSKDVCLH*IG*SSIWV*
E*NKRL*RLLRAILSE*HFNHSAEGYHAT*PDK
APAGNG*TRSCVRTAWEPAF*QLPFHHK*LFCP
*GPAKSRTKHIRKSSINFTEK**IPYKPESRRPF
C*QV*GVCR*FYQ*K*RTRSGKVIPF*MPIIR*
*VVHAQLLWESSE*KLPISRGAH*GC*CGGATA
GRVWATRFDGNILLAKARSRGNPLPGIWNQPLL*
*P*I*SF*RQSPRVSSCWQHTIFNLCIESSPIE
SCRICPESSCCSYY*YCWV*CNGRKCEQGEARI
DSFNRKGQQKNVHGGVWPDPRRIYARVQVCQKTP
HHFN*SNY*RDYSCCYENRC*VCV*TDTEIFSR
NCGRKMGS*LFLGDPVY*RKKNAE*A*F*SQRR
CGQWKKPPRSKASKRIPGQKDLQGARNLLLWALH
QHAHRSTGMDGTAVWCFCGEGAFIIHPWHRCPP
NCGCAARCLDRGQWLPCNWADV*GTCGDPRVGV
GQCSTLPVPGAGHLPDTPDPPQPLLTAASHRYRA
TGPQE*AYKVAFPGPGSSSHSSVLLLSWLLNIL
CTSA*KGLLAMQGSLKDFLLEVSLGNLP*AQNY
GNFSPEKILKPFKRHQLSKMLIHYLSALFFLFRL
LLA*GWKHRVAWPQENSWFP*VYFSKTLCSQRQ
RVRPFNGRRVLGIDYVT*SQNSPWAVLKCWSGT
LGRKF*GRY*K*KGNLKPGHGGSRL*SQHFGRPR
WADHWRSGVRNQPGQHGETPSLLKIQKLAGHGG
GHL*SQLLRWLRQENHFSPGGGGCSEPRSYHGT
PAWVTVRLWLKKKKKKRKMKLEEISKSLRYIC*I
SKECVLKQQKIFKNRFPKTVF*FLISNK*NVYC
CSSGI*SIPLKI*DLWHEYFISIK*QIPPGRKL
LLSLR*FFSFAPCC*NHTAS*IILLAEGRKSVFH
KPIIQDCL*LLEGLGLP*PPQCARAVKT*LYKI
RFVNVVLLTLQINLVANTS

Frame 1

YLDFVF*EAAA*R*PLGFRGNGKARELQIN*NC
DCAA*AR*DFLDGGQAVGFLR*LGPCAQEAFTL
CSG*SSLEQKEMDLSALRVEEVQNVINAMQKILE
CPICLELIKEPVSTKCDHIFCKFCMLKLLNQKK
GPSQCPLCKNDITKRSLQESTRFSQLVEELLKI
ICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVS
IIQSMGYRNRAKRLLQSEPENPSLQETSLSVQL
S
NLGTVRTLRTKQRIQPQKTSVYIELGEAASGC
ESETSVSEDCSGLSSQSDILTTQQRDTMQHNLIK
LQQEMAELEAVLEQHGSQPSNSYPSIISDSSAL
EDLRNPEQSTSEKAVLTSQKSSEYPISQNPEGL
SADKFEVSADSSTSKNKEPGVERSSPSKCPSLDD
RWYMHSCSGSLQNRNYPSQEELIKVVDVEEQQL
EESGPHDLTETSYLPRQDLEGTPYLESGISLFS
DDPESDPSEDRAPESARVGNIPSSTSALKVPQLK
VAESAQSPAAAHTTDTAGYNAMEESVSREKPEL
TASTERVNKRMSMVVSGLTPEEFMLVYKFARKH
HITLTNLITEETTHVVMKTDAEFVCERTLKYFLG
IAGGKWVVSYFWVTQSIKERKMLNEHDFEVRGD
VVNGRNHQGPKRARESQDRKIFRGLEICCYGPF
TNMPTDQLEWMVQLCGASVVKELSSFTLGTGVHP
IVVVQPDAWTEDNGFHAIGQMCEAPVVTREWVL
DSVALYQCQELDTYLIPQIPHSHY*LQPATGTE
PQDPKNELTKWPFQALGAPLTLQSFYCPGY*IFY
VHQPEKDFWLCKGPLKIFCLKSPLEICHEHKIM
VIFHLRRF*NHLNATN*ARC*FIIYQPYSFYSG
CCWLRAGSTEWLGLKRIAGFPKFTSLKPCVHKGR
ESDPSMEGECLGSIM*LKVRIVLGQFSNVGVEH
WGGNSEAGIRNEKET*NLGMVAHACNPSTLGGQ
GGQITGGQEFETSLANMVKPHLY*KYRN*PVMVV
DTCNPSYSGG*GRRITSAREVEVAVSQDHTTAL
QPG*Q*DCGSKKKKKKGK*N*KRFLKV*DIFAR
FLKNVF*NSRRFSRTGFQRQSSNSSLVISKMFIV
VALVYNPFLLKYKTSGMNISYL*NDRSHQEGSC
CFL*GDFFPLLPVAETIQLHK*FCLLKEEKVFF
INPLSRTVYSCWKD*VFPSPPSVQGQ*RLDCTKY
VL*MLCC*HCK*TW*QTLP

Frame 2

TLISYSERLLLSGSPLVSVATEKRGNYR*IKTA
TARRELAETSWTGDRLWGFSDNWAPALRRPSPS
ALGKVHWNRKKWIYLLFALKKYKMSLMLCRKS*
SVPSVWS*SRNLSPQSVTTYFANFAC*NFSTRRK
GLHSVLYVRMI*PKGAYKKVRDLVNLLKSY*KS
FVLFSLTQVWSMQTAIILQKRKITLLNI*KMKF
LSSKVWATETVPKDFYRVNPKILPCRKPVSVSNS
L
TLEL*EL*GQSSGYNLKRRLSTLNWVKQHLGV
RVKQASLKTAQGYPLRVTF*PLSRGIPCNIT**
SSSRKWLN*KLC*NSMGASLLTATLPS*VTLLPL
RTCEIQNKAHQKKQY*LHRKVVNTL*ARIQKAF
LLTSLRCLQIVLPVKIKNQEWKGHPLLNAHH*M
IGGTCTVALGVFRIETTHLKRSSLRLLMWRSNSW
KSLGHTI*RKHLTCQGKI*REPLTWNLESASSL
MTLNLILLKTEPQSQLVLATYHLQPLH*KFPN*
KLQNLPRVQLLLILLILLGIMQWKKV*AGRSQN*
QLQQKGSTKECPWWCLA*PQKNLCSCTSLPENT
TSL*LI*LLKRLLMLL*KQMLSLCVNGH*NIF*
ELREENG*LAISG*PSLLKKEKC*MSMILKSEEM
WSMEETTKVQSEQENPRTERSSGG*KSVAMGPS
PTCPQINWNGWYSCVVLLW*RSFHHSPLAQVST
QLWLCSQMPGQRTMASMQLGRCVRHLW*PESGCW
TV*HSTSARSWTPT*YPRSPTATTDCSQPQVQS
HRTPRMSLQSGLSRPWELLSLFSPSTVLATKYF
MYISLKRTSGYARVP*RFSA*SLPWKSAMSTKLW
*FFT*EDFKTI*TPPIEQDADSLFISPILSIQA
VVGLGLEAQSGLASRE*LVSLSLLL*NPVFTKA
ESQTLQWKESAWDRLCDLKSE*SLGSSQMLEWNI
GEEILRQVLEMKRKLETWAWWLTPVIPALWEAK
VGRSLEVRSSKPAWPTW*NPISTKNTEISRSWW
WTPVIPATQVAKAGESLQPGRWRLQ*AKIIPRHS
SLGDSETVAQKKKKKKENETRRDF*KSEIYLLD
F*RMCSKTAEDFQEPVSKDSLLIPH***VKCLL
L*LWYIIHSS*NIRPLA*IFHIYKMTDPTRKEAV
AFFEVIFFLCSLLLKPYSFINNFAC*RKKKCFS
*THYPGLFIAVGRTRSSLAPPVCKGSEDLIVQN
TFCKCCAVNTANKLGSKHF

Sequence BRCA1.mAug05

GTACCTTGATTTCGTATTCTGAGAGGCTGCTGCTTAGCGGTAGCCCCTTGGTTTCCGTGGCAACGGAAAAGCGCGGGAATTACAGATAAATTAAAACTGC
GACTGCGCGGCGTGAGCTCGCTGAGACTTCCTGGACGGGGGACAGGCTGTGGGGTTTCTCAGATAACTGGGCCCCTGCGCTCAGGAGGCCTTCACCCTCT
GCTCTGGGTAAAGTTCATTGGAACAGAAAGAAATGGATTTATCTGCTCTTCGCGTTGAAGAAGTACAAAATGTCATTAATGCTATGCAGAAAATCTTAGA
GTGTCCCATCTGTCTGGAGTTGATCAAGGAACCTGTCTCCACAAAGTGTGACCACATATTTTGCAAATTTTGCATGCTGAAACTTCTCAACCAGAAGAAA
GGGCCTTCACAGTGTCCTTTATGTAAGAATGATATAACCAAAAGGAGCCTACAAGAAAGTACGAGATTTAGTCAACTTGTTGAAGAGCTATTGAAAATCA
TTTGTGCTTTTCAGCTTGACACAGGTTTGGAGTATGCAAACAGCTATAATTTTGCAAAAAAGGAAAATAACTCTCCTGAACATCTAAAAGATGAAGTTTC
TATCATCCAAAGTATGGGCTACAGAAACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGCAGGAAACCAGTCTCAGTGTCCAACTC
TCT
AACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGGATACAACCTCAAAAGACGTCTGTCTACATTGAATTGGGATCTGATTCTTCTGAAGATA
CCGTTAATAAGGCAACTTATTGCAGTGTGGGAGATCAAGAATTGTTACAAATCACCCCTCAAGGAACCAGGGATGAAATCAGTTTGGATTCTGCAAAAAA
GG
GTGAAGCAGCATCTGGGTGTGAGAGTGAAACAAGCGTCTCTGAAGACTGCTCAGGGCTATCCTCTCAGAGTGACATTTTAACCACTCAGCAGAGGGAT
ACCATGCAACATAACCTGATAAAGCTCCAGCAGGAAATGGCTGAACTAGAAGCTGTGTTAGAACAGCATGGGAGCCAGCCTTCTAACAGCTACCCTTCCA
TCATAAGTGACTCTTCTGCCCTTGAGGACCTGCGAAATCCAGAACAAAGCACATCAGAAAAAGCAGTATTAACTTCACAGAAAAGTAGTGAATACCCTAT
AAGCCAGAATCCAGAAGGCCTTTCTGCTGACAAGTTTGAGGTGTCTGCAGATAGTTCTACCAGTAAAAATAAAGAACCAGGAGTGGAAAGGTCATCCCCT
TCTAAATGCCCATCATTAGATGATAGGTGGTACATGCACAGTTGCTCTGGGAGTCTTCAGAATAGAAACTACCCATCTCAAGAGGAGCTCATTAAGGTTG
TTGATGTGGAGGAGCAACAGCTGGAAGAGTCTGGGCCACACGATTTGACGGAAACATCTTACTTGCCAAGGCAAGATCTAGAGGGAACCCCTTACCTGGA
ATCTGGAATCAGCCTCTTCTCTGATGACCCTGAATCTGATCCTTCTGAAGACAGAGCCCCAGAGTCAGCTCGTGTTGGCAACATACCATCTTCAACCTCT
GCATTGAAAGTTCCCCAATTGAAAGTTGCAGAATCTGCCCAGAGTCCAGCTGCTGCTCATACTACTGATACTGCTGGGTATAATGCAATGGAAGAAAGTG
TGAGCAGGGAGAAGCCAGAATTGACAGCTTCAACAGAAAGGGTCAACAAAAGAATGTCCATGGTGGTGTCTGGCCTGACCCCAGAAGAATTTATGCTCGT
GTACAAGTTTGCCAGAAAACACCACATCACTTTAACTAATCTAATTACTGAAGAGACTACTCATGTTGTTATGAAAACAGATGCTGAGTTTGTGTGTGAA
CGGACACTGAAATATTTTCTAGGAATTGCGGGAGGAAAATGGGTAGTTAGCTATTTCTGGGTGACCCAGTCTATTAAAGAAAGAAAAATGCTGAATGAGC
ATGATTTTGAAGTCAGAGGAGATGTGGTCAATGGAAGAAACCACCAAGGTCCAAAGCGAGCAAGAGAATCCCAGGACAGAAAGATCTTCAGGGGGCTAGA
AATCTGTTGCTATGGGCCCTTCACCAACATGCCCACAGATCAACTGGAATGGATGGTACAGCTGTGTGGTGCTTCTGTGGTGAAGGAGCTTTCATCATTC
ACCCTTGGCACAGGTGTCCACCCAATTGTGGTTGTGCAGCCAGATGCCTGGACAGAGGACAATGGCTTCCATGCAATTGGGCAGATGTGTGAGGCACCTG
TGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGCCAGGAGCTGGACACCTACCTGATACCCCAGATCCCCCACAGCCACTACTGACT
GCAGCCAGCCACAGGTACAGAGCCACAGGACCCCAAGAATGAGCTTACAAAGTGGCCTTTCCAGGCCCTGGGAGCTCCTCTCACTCTTCAGTCCTTCTAC
TGTCCTGGCTACTAAATATTTTATGTACATCAGCCTGAAAAGGACTTCTGGCTATGCAAGGGTCCCTTAAAGATTTTCTGCTTGAAGTCTCCCTTGGAAA
TCTGCCATGAGCACAAAATTATGGTAATTTTTCACCTGAGAAGATTTTAAAACCATTTAAACGCCACCAATTGAGCAAGATGCTGATTCATTATTTATCA
GCCCTATTCTTTCTATTCAGGCTGTTGTTGGCTTAGGGCTGGAAGCACAGAGTGGCTTGGCCTCAAGAGAATAGCTGGTTTCCCTAAGTTTACTTCTCTA
AAACCCTGTGTTCACAAAGGCAGAGAGTCAGACCCTTCAATGGAAGGAGAGTGCTTGGGATCGATTATGTGACTTAAAGTCAGAATAGTCCTTGGGCAGT
TCTCAAATGTTGGAGTGGAACATTGGGGAGGAAATTCTGAGGCAGGTATTAGAAATGAAAAGGAAACTTGAAACCTGGGCATGGTGGCTCACGCCTGTAA
TCCCAGCACTTTGGGAGGCCAAGGTGGGCAGATCACTGGAGGTCAGGAGTTCGAAACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATAC
AGAAATTAGCCGGTCATGGTGGTGGACACCTGTAATCCCAGCTACTCAGGTGGCTAAGGCAGGAGAATCACTTCAGCCCGGGAGGTGGAGGTTGCAGTGA
GCCAAGATCATACCACGGCACTCCAGCCTGGGTGACAGTGAGACTGTGGCTCAAAAAAAAAAAAAAAAAAAGGAAAATGAAACTAGAAGAGATTTCTAAA
AGTCTGAGATATATTTGCTAGATTTCTAAAGAATGTGTTCTAAAACAGCAGAAGATTTTCAAGAACCGGTTTCCAAAGACAGTCTTCTAATTCCTCATTA
GTAATAAGTAAAATGTTTATTGTTGTAGCTCTGGTATATAATCCATTCCTCTTAAAATATAAGACCTCTGGCATGAATATTTCATATCTATAAAATGACA
GATCCCACCAGGAAGGAAGCTGTTGCTTTCTTTGAGGTGATTTTTTTCCTTTGCTCCCTGTTGCTGAAACCATACAGCTTCATAAATAATTTTGCTTGCT
GAAGGAAGAAAAAGTGTTTTTCATAAACCCATTATCCAGGACTGTTTATAGCTGTTGGAAGGACTAGGTCTTCCCTAGCCCCCCCAGTGTGCAAGGGCAG
TGAAGACTTGATTGTACAAAATACGTTTTGTAAATGTTGTGCTGTTAACACTGCAAATAAACTTGGTAGCAAACACTTCCA
  • BRCA1-F2 (forward primer)
  • BRCA1-R2 (reverse primer)
  • Multiple exon skipping

Frame 0

VP*FRILRGCCLAVAPWFPWQRKSAGITDKLKL
RLRGVSSLRLPGRGTGCGVSQITGPLRSGGLHPL
LWVKFIGTERNGFICSSR*RSTKCH*CYAENLR
VSHLSGVDQGTCLHKV*PHILQILHAETSQPEE
RAFTVSFM*E*YNQKEPTRKYEI*STC*RAIENH
LCFSA*HRFGVCKQL*FCKKGK*LS*TSKR*SF
YHPKYGLQKPCQKTSTE*TRKSFLAGNQSQCPT
L
*PWNCENSEDKAADTTSKDVCLH*IGI*FF*RY
R**GNLLQCGRSRIVTNHPSRNQG*NQFGFCKK
G
*SSIWV*E*NKRL*RLLRAILSE*HFNHSAEG
YHAT*PDKAPAGNG*TRSCVRTAWEPAF*QLPFH
HK*LFCP*GPAKSRTKHIRKSSINFTEK**IPY
KPESRRPFC*QV*GVCR*FYQ*K*RTRSGKVIP
F*MPIIR**VVHAQLLWESSE*KLPISRGAH*GC
*CGGATAGRVWATRFDGNILLAKARSRGNPLPG
IWNQPLL**P*I*SF*RQSPRVSSCWQHTIFNL
CIESSPIESCRICPESSCCSYY*YCWV*CNGRKC
EQGEARIDSFNRKGQQKNVHGGVWPDPRRIYAR
VQVCQKTPHHFN*SNY*RDYSCCYENRC*VCV*
TDTEIFSRNCGRKMGS*LFLGDPVY*RKKNAE*A
*F*SQRRCGQWKKPPRSKASKRIPGQKDLQGAR
NLLLWALHQHAHRSTGMDGTAVWCFCGEGAFII
HPWHRCPPNCGCAARCLDRGQWLPCNWADV*GTC
GDPRVGVGQCSTLPVPGAGHLPDTPDPPQPLLT
AASHRYRATGPQE*AYKVAFPGPGSSSHSSVLL
LSWLLNILCTSA*KGLLAMQGSLKDFLLEVSLGN
LP*AQNYGNFSPEKILKPFKRHQLSKMLIHYLS
ALFFLFRLLLA*GWKHRVAWPQENSWFP*VYFS
KTLCSQRQRVRPFNGRRVLGIDYVT*SQNSPWAV
LKCWSGTLGRKF*GRY*K*KGNLKPGHGGSRL*
SQHFGRPRWADHWRSGVRNQPGQHGETPSLLKI
QKLAGHGGGHL*SQLLRWLRQENHFSPGGGGCSE
PRSYHGTPAWVTVRLWLKKKKKKRKMKLEEISK
SLRYIC*ISKECVLKQQKIFKNRFPKTVF*FLI
SNK*NVYCCSSGI*SIPLKI*DLWHEYFISIK*Q
IPPGRKLLLSLR*FFSFAPCC*NHTAS*IILLA
EGRKSVFHKPIIQDCL*LLEGLGLP*PPQCARA
VKT*LYKIRFVNVVLLTLQINLVANTS

Frame 1

YLDFVF*EAAA*R*PLGFRGNGKARELQIN*NC
DCAA*AR*DFLDGGQAVGFLR*LGPCAQEAFTL
CSG*SSLEQKEMDLSALRVEEVQNVINAMQKILE
CPICLELIKEPVSTKCDHIFCKFCMLKLLNQKK
GPSQCPLCKNDITKRSLQESTRFSQLVEELLKI
ICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVS
IIQSMGYRNRAKRLLQSEPENPSLQETSLSVQL
S
NLGTVRTLRTKQRIQPQKTSVYIELGSDSSED
TVNKATYCSVGDQELLQITPQGTRDEISLDSAKK
GEAASGCESETSVSEDCSGLSSQSDILTTQQRD
TMQHNLIKLQQEMAELEAVLEQHGSQPSNSYPS
IISDSSALEDLRNPEQSTSEKAVLTSQKSSEYPI
SQNPEGLSADKFEVSADSSTSKNKEPGVERSSP
SKCPSLDDRWYMHSCSGSLQNRNYPSQEELIKV
VDVEEQQLEESGPHDLTETSYLPRQDLEGTPYLE
SGISLFSDDPESDPSEDRAPESARVGNIPSSTS
ALKVPQLKVAESAQSPAAAHTTDTAGYNAMEES
VSREKPELTASTERVNKRMSMVVSGLTPEEFMLV
YKFARKHHITLTNLITEETTHVVMKTDAEFVCE
RTLKYFLGIAGGKWVVSYFWVTQSIKERKMLNE
HDFEVRGDVVNGRNHQGPKRARESQDRKIFRGLE
ICCYGPFTNMPTDQLEWMVQLCGASVVKELSSF
TLGTGVHPIVVVQPDAWTEDNGFHAIGQMCEAP
VVTREWVLDSVALYQCQELDTYLIPQIPHSHY*L
QPATGTEPQDPKNELTKWPFQALGAPLTLQSFY
CPGY*IFYVHQPEKDFWLCKGPLKIFCLKSPLE
ICHEHKIMVIFHLRRF*NHLNATN*ARC*FIIYQ
PYSFYSGCCWLRAGSTEWLGLKRIAGFPKFTSL
KPCVHKGRESDPSMEGECLGSIM*LKVRIVLGQ
FSNVGVEHWGGNSEAGIRNEKET*NLGMVAHACN
PSTLGGQGGQITGGQEFETSLANMVKPHLY*KY
RN*PVMVVDTCNPSYSGG*GRRITSAREVEVAV
SQDHTTALQPG*Q*DCGSKKKKKKGK*N*KRFLK
V*DIFARFLKNVF*NSRRFSRTGFQRQSSNSSL
VISKMFIVVALVYNPFLLKYKTSGMNISYL*ND
RSHQEGSCCFL*GDFFPLLPVAETIQLHK*FCLL
KEEKVFFINPLSRTVYSCWKD*VFPSPPSVQGQ
*RLDCTKYVL*MLCC*HCK*TW*QTLP

Frame 2

TLISYSERLLLSGSPLVSVATEKRGNYR*IKTA
TARRELAETSWTGDRLWGFSDNWAPALRRPSPS
ALGKVHWNRKKWIYLLFALKKYKMSLMLCRKS*
SVPSVWS*SRNLSPQSVTTYFANFAC*NFSTRRK
GLHSVLYVRMI*PKGAYKKVRDLVNLLKSY*KS
FVLFSLTQVWSMQTAIILQKRKITLLNI*KMKF
LSSKVWATETVPKDFYRVNPKILPCRKPVSVSNS
L
TLEL*EL*GQSSGYNLKRRLSTLNWDLILLKI
PLIRQLIAVWEIKNCYKSPLKEPGMKSVWILQK
R
VKQHLGVRVKQASLKTAQGYPLRVTF*PLSRGI
PCNIT**SSSRKWLN*KLC*NSMGASLLTATLP
S*VTLLPLRTCEIQNKAHQKKQY*LHRKVVNTL
*ARIQKAFLLTSLRCLQIVLPVKIKNQEWKGHPL
LNAHH*MIGGTCTVALGVFRIETTHLKRSSLRL
LMWRSNSWKSLGHTI*RKHLTCQGKI*REPLTW
NLESASSLMTLNLILLKTEPQSQLVLATYHLQPL
H*KFPN*KLQNLPRVQLLLILLILLGIMQWKKV
*AGRSQN*QLQQKGSTKECPWWCLA*PQKNLCS
CTSLPENTTSL*LI*LLKRLLMLL*KQMLSLCVN
GH*NIF*ELREENG*LAISG*PSLLKKEKC*MS
MILKSEEMWSMEETTKVQSEQENPRTERSSGG*
KSVAMGPSPTCPQINWNGWYSCVVLLW*RSFHHS
PLAQVSTQLWLCSQMPGQRTMASMQLGRCVRHL
W*PESGCWTV*HSTSARSWTPT*YPRSPTATTD
CSQPQVQSHRTPRMSLQSGLSRPWELLSLFSPST
VLATKYFMYISLKRTSGYARVP*RFSA*SLPWK
SAMSTKLW*FFT*EDFKTI*TPPIEQDADSLFI
SPILSIQAVVGLGLEAQSGLASRE*LVSLSLLL*
NPVFTKAESQTLQWKESAWDRLCDLKSE*SLGS
SQMLEWNIGEEILRQVLEMKRKLETWAWWLTPV
IPALWEAKVGRSLEVRSSKPAWPTW*NPISTKNT
EISRSWWWTPVIPATQVAKAGESLQPGRWRLQ*
AKIIPRHSSLGDSETVAQKKKKKKENETRRDF*
KSEIYLLDF*RMCSKTAEDFQEPVSKDSLLIPH*
**VKCLLL*LWYIIHSS*NIRPLA*IFHIYKMT
DPTRKEAVAFFEVIFFLCSLLLKPYSFINNFAC
*RKKKCFS*THYPGLFIAVGRTRSSLAPPVCKGS
EDLIVQNTFCKCCAVNTANKLGSKHF

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