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Supplementary data
RBFOX2 enforces the mesenchymal splicing signature in normal and cancer tissues
4. CASita plate / epithelium and mesenchyme (fetal colon)
Transcript map
: FGFR1OP epithelium
- FGFR1OP.u.f.10 / FGFR1OP.u.r.12 (CM016809 A23) : Curve | Curve set
- FGFR1OP.u.f.10 / FGFR1OP.u.r.12 (CM016809 A23) : Curve | Curve set
Exon
Length: 187
Transcript: FGFR1OP.aAug05
Length: 187
Transcript: FGFR1OP.aAug05
Exon
Length: 54
Transcript: FGFR1OP.aAug05
Length: 54
Transcript: FGFR1OP.aAug05
Exon
Length: 55
Transcript: FGFR1OP.aAug05
Length: 55
Transcript: FGFR1OP.aAug05
Exon
Length: 89
Transcript: FGFR1OP.aAug05
Length: 89
Transcript: FGFR1OP.aAug05
Exon
Length: 138
Transcript: FGFR1OP.aAug05
Length: 138
Transcript: FGFR1OP.aAug05
Exon
Length: 81
Transcript: FGFR1OP.aAug05
Length: 81
Transcript: FGFR1OP.aAug05
Exon
Length: 60
Transcript: FGFR1OP.aAug05
Length: 60
Transcript: FGFR1OP.aAug05
Exon
Length: 227
Transcript: FGFR1OP.aAug05
Length: 227
Transcript: FGFR1OP.aAug05
Exon
Length: 113
Transcript: FGFR1OP.aAug05
Length: 113
Transcript: FGFR1OP.aAug05
Exon
Length: 69
Transcript: FGFR1OP.aAug05
Length: 69
Transcript: FGFR1OP.aAug05
Exon
Length: 40
Transcript: FGFR1OP.aAug05
Length: 40
Transcript: FGFR1OP.aAug05
Exon
Length: 97
Transcript: FGFR1OP.aAug05
Length: 97
Transcript: FGFR1OP.aAug05
Exon
Length: 674
Transcript: FGFR1OP.aAug05
Length: 674
Transcript: FGFR1OP.aAug05
Intron
Length: 545
Transcript: FGFR1OP.aAug05
Length: 545
Transcript: FGFR1OP.aAug05
Intron
Length: 3079
Transcript: FGFR1OP.aAug05
Length: 3079
Transcript: FGFR1OP.aAug05
Intron
Length: 475
Transcript: FGFR1OP.aAug05
Length: 475
Transcript: FGFR1OP.aAug05
Intron
Length: 452
Transcript: FGFR1OP.aAug05
Length: 452
Transcript: FGFR1OP.aAug05
Intron
Length: 6411
Transcript: FGFR1OP.aAug05
Length: 6411
Transcript: FGFR1OP.aAug05
Intron
Length: 2614
Transcript: FGFR1OP.aAug05
Length: 2614
Transcript: FGFR1OP.aAug05
Intron
Length: 8841
Transcript: FGFR1OP.aAug05
Length: 8841
Transcript: FGFR1OP.aAug05
Intron
Length: 2146
Transcript: FGFR1OP.aAug05
Length: 2146
Transcript: FGFR1OP.aAug05
Intron
Length: 1652
Transcript: FGFR1OP.aAug05
Length: 1652
Transcript: FGFR1OP.aAug05
Intron
Length: 5987
Transcript: FGFR1OP.aAug05
Length: 5987
Transcript: FGFR1OP.aAug05
Intron
Length: 1232
Transcript: FGFR1OP.aAug05
Length: 1232
Transcript: FGFR1OP.aAug05
Intron
Length: 5932
Transcript: FGFR1OP.aAug05
Length: 5932
Transcript: FGFR1OP.aAug05
Reaction
Expected peak: 168
3.2M
FGFR1OP.u.f.10
FGFR1OP.u.r.12
Expected peak: 168
3.2M
FGFR1OP.u.f.10
FGFR1OP.u.r.12
Reaction
Expected peak: 168
3.2M
FGFR1OP.u.f.10
FGFR1OP.u.r.12
Expected peak: 168
3.2M
FGFR1OP.u.f.10
FGFR1OP.u.r.12
Reaction
Expected peak: 168
3.2M
FGFR1OP.u.f.10
FGFR1OP.u.r.12
Expected peak: 168
3.2M
FGFR1OP.u.f.10
FGFR1OP.u.r.12
Reaction
Expected peak: 168
3.2M
FGFR1OP.u.f.10
FGFR1OP.u.r.12
Expected peak: 168
3.2M
FGFR1OP.u.f.10
FGFR1OP.u.r.12
Exon
Length: 189
Transcript: FGFR1OP.bAug05
Length: 189
Transcript: FGFR1OP.bAug05
Exon
Length: 54
Transcript: FGFR1OP.bAug05
Length: 54
Transcript: FGFR1OP.bAug05
Exon
Length: 55
Transcript: FGFR1OP.bAug05
Length: 55
Transcript: FGFR1OP.bAug05
Exon
Length: 89
Transcript: FGFR1OP.bAug05
Length: 89
Transcript: FGFR1OP.bAug05
Exon
Length: 138
Transcript: FGFR1OP.bAug05
Length: 138
Transcript: FGFR1OP.bAug05
Exon
Length: 81
Transcript: FGFR1OP.bAug05
Length: 81
Transcript: FGFR1OP.bAug05
Exon
Length: 227
Transcript: FGFR1OP.bAug05
Length: 227
Transcript: FGFR1OP.bAug05
Exon
Length: 113
Transcript: FGFR1OP.bAug05
Length: 113
Transcript: FGFR1OP.bAug05
Exon
Length: 69
Transcript: FGFR1OP.bAug05
Length: 69
Transcript: FGFR1OP.bAug05
Exon
Length: 40
Transcript: FGFR1OP.bAug05
Length: 40
Transcript: FGFR1OP.bAug05
Exon
Length: 97
Transcript: FGFR1OP.bAug05
Length: 97
Transcript: FGFR1OP.bAug05
Exon
Length: 674
Transcript: FGFR1OP.bAug05
Length: 674
Transcript: FGFR1OP.bAug05
Intron
Length: 545
Transcript: FGFR1OP.bAug05
Length: 545
Transcript: FGFR1OP.bAug05
Intron
Length: 3079
Transcript: FGFR1OP.bAug05
Length: 3079
Transcript: FGFR1OP.bAug05
Intron
Length: 475
Transcript: FGFR1OP.bAug05
Length: 475
Transcript: FGFR1OP.bAug05
Intron
Length: 452
Transcript: FGFR1OP.bAug05
Length: 452
Transcript: FGFR1OP.bAug05
Intron
Length: 6411
Transcript: FGFR1OP.bAug05
Length: 6411
Transcript: FGFR1OP.bAug05
Intron
Length: 11515
Transcript: FGFR1OP.bAug05
Length: 11515
Transcript: FGFR1OP.bAug05
Intron
Length: 2146
Transcript: FGFR1OP.bAug05
Length: 2146
Transcript: FGFR1OP.bAug05
Intron
Length: 1652
Transcript: FGFR1OP.bAug05
Length: 1652
Transcript: FGFR1OP.bAug05
Intron
Length: 5987
Transcript: FGFR1OP.bAug05
Length: 5987
Transcript: FGFR1OP.bAug05
Intron
Length: 1232
Transcript: FGFR1OP.bAug05
Length: 1232
Transcript: FGFR1OP.bAug05
Intron
Length: 5932
Transcript: FGFR1OP.bAug05
Length: 5932
Transcript: FGFR1OP.bAug05
Reaction
Expected peak: 108
100.9M
FGFR1OP.u.f.10
FGFR1OP.u.r.12
Expected peak: 108
100.9M
FGFR1OP.u.f.10
FGFR1OP.u.r.12
Reaction
Expected peak: 108
100.9M
FGFR1OP.u.f.10
FGFR1OP.u.r.12
Expected peak: 108
100.9M
FGFR1OP.u.f.10
FGFR1OP.u.r.12
Reaction
Expected peak: 108
100.9M
FGFR1OP.u.f.10
FGFR1OP.u.r.12
Expected peak: 108
100.9M
FGFR1OP.u.f.10
FGFR1OP.u.r.12
Reaction
Expected peak: 108
100.9M
FGFR1OP.u.f.10
FGFR1OP.u.r.12
Expected peak: 108
100.9M
FGFR1OP.u.f.10
FGFR1OP.u.r.12
Exon
Length: 1520
Transcript: FGFR1OP.cAug05
Length: 1520
Transcript: FGFR1OP.cAug05
Exon
Length: 113
Transcript: FGFR1OP.cAug05
Length: 113
Transcript: FGFR1OP.cAug05
Exon
Length: 69
Transcript: FGFR1OP.cAug05
Length: 69
Transcript: FGFR1OP.cAug05
Exon
Length: 40
Transcript: FGFR1OP.cAug05
Length: 40
Transcript: FGFR1OP.cAug05
Exon
Length: 97
Transcript: FGFR1OP.cAug05
Length: 97
Transcript: FGFR1OP.cAug05
Exon
Length: 268
Transcript: FGFR1OP.cAug05
Length: 268
Transcript: FGFR1OP.cAug05
Intron
Length: 2146
Transcript: FGFR1OP.cAug05
Length: 2146
Transcript: FGFR1OP.cAug05
Intron
Length: 1652
Transcript: FGFR1OP.cAug05
Length: 1652
Transcript: FGFR1OP.cAug05
Intron
Length: 5987
Transcript: FGFR1OP.cAug05
Length: 5987
Transcript: FGFR1OP.cAug05
Intron
Length: 1232
Transcript: FGFR1OP.cAug05
Length: 1232
Transcript: FGFR1OP.cAug05
Intron
Length: 6076
Transcript: FGFR1OP.cAug05
Length: 6076
Transcript: FGFR1OP.cAug05
Exon
Length: 688
Transcript: FGFR1OP.dAug05
Length: 688
Transcript: FGFR1OP.dAug05
Exon
Length: 55
Transcript: FGFR1OP.dAug05
Length: 55
Transcript: FGFR1OP.dAug05
Exon
Length: 89
Transcript: FGFR1OP.dAug05
Length: 89
Transcript: FGFR1OP.dAug05
Exon
Length: 41
Transcript: FGFR1OP.dAug05
Length: 41
Transcript: FGFR1OP.dAug05
Intron
Length: 3079
Transcript: FGFR1OP.dAug05
Length: 3079
Transcript: FGFR1OP.dAug05
Intron
Length: 475
Transcript: FGFR1OP.dAug05
Length: 475
Transcript: FGFR1OP.dAug05
Intron
Length: 452
Transcript: FGFR1OP.dAug05
Length: 452
Transcript: FGFR1OP.dAug05
Exon
Length: 58
Transcript: FGFR1OP.eAug05
Length: 58
Transcript: FGFR1OP.eAug05
Exon
Length: 54
Transcript: FGFR1OP.eAug05
Length: 54
Transcript: FGFR1OP.eAug05
Exon
Length: 55
Transcript: FGFR1OP.eAug05
Length: 55
Transcript: FGFR1OP.eAug05
Exon
Length: 89
Transcript: FGFR1OP.eAug05
Length: 89
Transcript: FGFR1OP.eAug05
Exon
Length: 98
Transcript: FGFR1OP.eAug05
Length: 98
Transcript: FGFR1OP.eAug05
Exon
Length: 106
Transcript: FGFR1OP.eAug05
Length: 106
Transcript: FGFR1OP.eAug05
Intron
Length: 545
Transcript: FGFR1OP.eAug05
Length: 545
Transcript: FGFR1OP.eAug05
Intron
Length: 3079
Transcript: FGFR1OP.eAug05
Length: 3079
Transcript: FGFR1OP.eAug05
Intron
Length: 475
Transcript: FGFR1OP.eAug05
Length: 475
Transcript: FGFR1OP.eAug05
Intron
Length: 452
Transcript: FGFR1OP.eAug05
Length: 452
Transcript: FGFR1OP.eAug05
Intron
Length: 7224
Transcript: FGFR1OP.eAug05
Length: 7224
Transcript: FGFR1OP.eAug05
Exon
Length: 210
Transcript: FGFR1OP.fAug05
Length: 210
Transcript: FGFR1OP.fAug05
Exon
Length: 433
Transcript: FGFR1OP.fAug05
Length: 433
Transcript: FGFR1OP.fAug05
Intron
Length: 2146
Transcript: FGFR1OP.fAug05
Length: 2146
Transcript: FGFR1OP.fAug05
Exon
Length: 105
Transcript: FGFR1OP.gAug05
Length: 105
Transcript: FGFR1OP.gAug05
Exon
Length: 69
Transcript: FGFR1OP.gAug05
Length: 69
Transcript: FGFR1OP.gAug05
Exon
Length: 126
Transcript: FGFR1OP.gAug05
Length: 126
Transcript: FGFR1OP.gAug05
Exon
Length: 40
Transcript: FGFR1OP.gAug05
Length: 40
Transcript: FGFR1OP.gAug05
Intron
Length: 1652
Transcript: FGFR1OP.gAug05
Length: 1652
Transcript: FGFR1OP.gAug05
Intron
Length: 1251
Transcript: FGFR1OP.gAug05
Length: 1251
Transcript: FGFR1OP.gAug05
Intron
Length: 4610
Transcript: FGFR1OP.gAug05
Length: 4610
Transcript: FGFR1OP.gAug05
Exon
Length: 556
Transcript: FGFR1OP.shed1.aAug05
Length: 556
Transcript: FGFR1OP.shed1.aAug05
FGFR1OP.u.r.12
GCTCTTGGGTTCTGACAAGG
GCTCTTGGGTTCTGACAAGG
FGFR1OP.u.f.10
CCAAAGTCACCAGAGGGAAA
CCAAAGTCACCAGAGGGAAA