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Supplementary data
RBFOX2 enforces the mesenchymal splicing signature in normal and cancer tissues
1. Initial RefSeq screen / epithelium and mesenchyme (fetal colon)
Transcript map
: ADAMTS13 epithelium
Exon
Length: 549
Transcript: NM_139025
Length: 549
Transcript: NM_139025
Exon
Length: 67
Transcript: NM_139025
Length: 67
Transcript: NM_139025
Exon
Length: 158
Transcript: NM_139025
Length: 158
Transcript: NM_139025
Exon
Length: 84
Transcript: NM_139025
Length: 84
Transcript: NM_139025
Exon
Length: 125
Transcript: NM_139025
Length: 125
Transcript: NM_139025
Exon
Length: 147
Transcript: NM_139025
Length: 147
Transcript: NM_139025
Exon
Length: 138
Transcript: NM_139025
Length: 138
Transcript: NM_139025
Exon
Length: 163
Transcript: NM_139025
Length: 163
Transcript: NM_139025
Exon
Length: 105
Transcript: NM_139025
Length: 105
Transcript: NM_139025
Exon
Length: 152
Transcript: NM_139025
Length: 152
Transcript: NM_139025
Exon
Length: 64
Transcript: NM_139025
Length: 64
Transcript: NM_139025
Exon
Length: 127
Transcript: NM_139025
Length: 127
Transcript: NM_139025
Exon
Length: 149
Transcript: NM_139025
Length: 149
Transcript: NM_139025
Exon
Length: 121
Transcript: NM_139025
Length: 121
Transcript: NM_139025
Exon
Length: 81
Transcript: NM_139025
Length: 81
Transcript: NM_139025
Exon
Length: 182
Transcript: NM_139025
Length: 182
Transcript: NM_139025
Exon
Length: 136
Transcript: NM_139025
Length: 136
Transcript: NM_139025
Exon
Length: 130
Transcript: NM_139025
Length: 130
Transcript: NM_139025
Exon
Length: 186
Transcript: NM_139025
Length: 186
Transcript: NM_139025
Exon
Length: 190
Transcript: NM_139025
Length: 190
Transcript: NM_139025
Exon
Length: 121
Transcript: NM_139025
Length: 121
Transcript: NM_139025
Exon
Length: 130
Transcript: NM_139025
Length: 130
Transcript: NM_139025
Exon
Length: 183
Transcript: NM_139025
Length: 183
Transcript: NM_139025
Exon
Length: 205
Transcript: NM_139025
Length: 205
Transcript: NM_139025
Exon
Length: 319
Transcript: NM_139025
Length: 319
Transcript: NM_139025
Exon
Length: 147
Transcript: NM_139025
Length: 147
Transcript: NM_139025
Exon
Length: 177
Transcript: NM_139025
Length: 177
Transcript: NM_139025
Exon
Length: 185
Transcript: NM_139025
Length: 185
Transcript: NM_139025
Exon
Length: 412
Transcript: NM_139025
Length: 412
Transcript: NM_139025
Intron
Length: 552
Transcript: NM_139025
Length: 552
Transcript: NM_139025
Intron
Length: 1153
Transcript: NM_139025
Length: 1153
Transcript: NM_139025
Intron
Length: 1050
Transcript: NM_139025
Length: 1050
Transcript: NM_139025
Intron
Length: 325
Transcript: NM_139025
Length: 325
Transcript: NM_139025
Intron
Length: 136
Transcript: NM_139025
Length: 136
Transcript: NM_139025
Intron
Length: 2288
Transcript: NM_139025
Length: 2288
Transcript: NM_139025
Intron
Length: 1167
Transcript: NM_139025
Length: 1167
Transcript: NM_139025
Intron
Length: 2487
Transcript: NM_139025
Length: 2487
Transcript: NM_139025
Intron
Length: 684
Transcript: NM_139025
Length: 684
Transcript: NM_139025
Intron
Length: 111
Transcript: NM_139025
Length: 111
Transcript: NM_139025
Intron
Length: 3124
Transcript: NM_139025
Length: 3124
Transcript: NM_139025
Intron
Length: 793
Transcript: NM_139025
Length: 793
Transcript: NM_139025
Intron
Length: 348
Transcript: NM_139025
Length: 348
Transcript: NM_139025
Intron
Length: 1000
Transcript: NM_139025
Length: 1000
Transcript: NM_139025
Intron
Length: 897
Transcript: NM_139025
Length: 897
Transcript: NM_139025
Intron
Length: 1873
Transcript: NM_139025
Length: 1873
Transcript: NM_139025
Intron
Length: 79
Transcript: NM_139025
Length: 79
Transcript: NM_139025
Intron
Length: 632
Transcript: NM_139025
Length: 632
Transcript: NM_139025
Intron
Length: 1301
Transcript: NM_139025
Length: 1301
Transcript: NM_139025
Intron
Length: 646
Transcript: NM_139025
Length: 646
Transcript: NM_139025
Intron
Length: 2779
Transcript: NM_139025
Length: 2779
Transcript: NM_139025
Intron
Length: 1054
Transcript: NM_139025
Length: 1054
Transcript: NM_139025
Intron
Length: 4450
Transcript: NM_139025
Length: 4450
Transcript: NM_139025
Intron
Length: 665
Transcript: NM_139025
Length: 665
Transcript: NM_139025
Intron
Length: 465
Transcript: NM_139025
Length: 465
Transcript: NM_139025
Intron
Length: 327
Transcript: NM_139025
Length: 327
Transcript: NM_139025
Intron
Length: 1190
Transcript: NM_139025
Length: 1190
Transcript: NM_139025
Intron
Length: 879
Transcript: NM_139025
Length: 879
Transcript: NM_139025
Reaction
Expected peak: 303
0.5M
refseq_ADAMTS13.F2
refseq_ADAMTS13.R2
Expected peak: 303
0.5M
refseq_ADAMTS13.F2
refseq_ADAMTS13.R2
Exon
Length: 549
Transcript: NM_139026
Length: 549
Transcript: NM_139026
Exon
Length: 67
Transcript: NM_139026
Length: 67
Transcript: NM_139026
Exon
Length: 158
Transcript: NM_139026
Length: 158
Transcript: NM_139026
Exon
Length: 84
Transcript: NM_139026
Length: 84
Transcript: NM_139026
Exon
Length: 125
Transcript: NM_139026
Length: 125
Transcript: NM_139026
Exon
Length: 147
Transcript: NM_139026
Length: 147
Transcript: NM_139026
Exon
Length: 138
Transcript: NM_139026
Length: 138
Transcript: NM_139026
Exon
Length: 70
Transcript: NM_139026
Length: 70
Transcript: NM_139026
Exon
Length: 105
Transcript: NM_139026
Length: 105
Transcript: NM_139026
Exon
Length: 152
Transcript: NM_139026
Length: 152
Transcript: NM_139026
Exon
Length: 64
Transcript: NM_139026
Length: 64
Transcript: NM_139026
Exon
Length: 127
Transcript: NM_139026
Length: 127
Transcript: NM_139026
Exon
Length: 149
Transcript: NM_139026
Length: 149
Transcript: NM_139026
Exon
Length: 121
Transcript: NM_139026
Length: 121
Transcript: NM_139026
Exon
Length: 81
Transcript: NM_139026
Length: 81
Transcript: NM_139026
Exon
Length: 182
Transcript: NM_139026
Length: 182
Transcript: NM_139026
Exon
Length: 136
Transcript: NM_139026
Length: 136
Transcript: NM_139026
Exon
Length: 130
Transcript: NM_139026
Length: 130
Transcript: NM_139026
Exon
Length: 186
Transcript: NM_139026
Length: 186
Transcript: NM_139026
Exon
Length: 190
Transcript: NM_139026
Length: 190
Transcript: NM_139026
Exon
Length: 121
Transcript: NM_139026
Length: 121
Transcript: NM_139026
Exon
Length: 130
Transcript: NM_139026
Length: 130
Transcript: NM_139026
Exon
Length: 183
Transcript: NM_139026
Length: 183
Transcript: NM_139026
Exon
Length: 205
Transcript: NM_139026
Length: 205
Transcript: NM_139026
Exon
Length: 151
Transcript: NM_139026
Length: 151
Transcript: NM_139026
Exon
Length: 147
Transcript: NM_139026
Length: 147
Transcript: NM_139026
Exon
Length: 177
Transcript: NM_139026
Length: 177
Transcript: NM_139026
Exon
Length: 185
Transcript: NM_139026
Length: 185
Transcript: NM_139026
Exon
Length: 412
Transcript: NM_139026
Length: 412
Transcript: NM_139026
Intron
Length: 552
Transcript: NM_139026
Length: 552
Transcript: NM_139026
Intron
Length: 1153
Transcript: NM_139026
Length: 1153
Transcript: NM_139026
Intron
Length: 1050
Transcript: NM_139026
Length: 1050
Transcript: NM_139026
Intron
Length: 325
Transcript: NM_139026
Length: 325
Transcript: NM_139026
Intron
Length: 136
Transcript: NM_139026
Length: 136
Transcript: NM_139026
Intron
Length: 2288
Transcript: NM_139026
Length: 2288
Transcript: NM_139026
Intron
Length: 1260
Transcript: NM_139026
Length: 1260
Transcript: NM_139026
Intron
Length: 2487
Transcript: NM_139026
Length: 2487
Transcript: NM_139026
Intron
Length: 684
Transcript: NM_139026
Length: 684
Transcript: NM_139026
Intron
Length: 111
Transcript: NM_139026
Length: 111
Transcript: NM_139026
Intron
Length: 3124
Transcript: NM_139026
Length: 3124
Transcript: NM_139026
Intron
Length: 793
Transcript: NM_139026
Length: 793
Transcript: NM_139026
Intron
Length: 348
Transcript: NM_139026
Length: 348
Transcript: NM_139026
Intron
Length: 1000
Transcript: NM_139026
Length: 1000
Transcript: NM_139026
Intron
Length: 897
Transcript: NM_139026
Length: 897
Transcript: NM_139026
Intron
Length: 1873
Transcript: NM_139026
Length: 1873
Transcript: NM_139026
Intron
Length: 79
Transcript: NM_139026
Length: 79
Transcript: NM_139026
Intron
Length: 632
Transcript: NM_139026
Length: 632
Transcript: NM_139026
Intron
Length: 1301
Transcript: NM_139026
Length: 1301
Transcript: NM_139026
Intron
Length: 646
Transcript: NM_139026
Length: 646
Transcript: NM_139026
Intron
Length: 2779
Transcript: NM_139026
Length: 2779
Transcript: NM_139026
Intron
Length: 1054
Transcript: NM_139026
Length: 1054
Transcript: NM_139026
Intron
Length: 4450
Transcript: NM_139026
Length: 4450
Transcript: NM_139026
Intron
Length: 665
Transcript: NM_139026
Length: 665
Transcript: NM_139026
Intron
Length: 633
Transcript: NM_139026
Length: 633
Transcript: NM_139026
Intron
Length: 327
Transcript: NM_139026
Length: 327
Transcript: NM_139026
Intron
Length: 1190
Transcript: NM_139026
Length: 1190
Transcript: NM_139026
Intron
Length: 879
Transcript: NM_139026
Length: 879
Transcript: NM_139026
Reaction
Expected peak: 135
6.6M
refseq_ADAMTS13.F2
refseq_ADAMTS13.R2
Expected peak: 135
6.6M
refseq_ADAMTS13.F2
refseq_ADAMTS13.R2
Exon
Length: 549
Transcript: NM_139027
Length: 549
Transcript: NM_139027
Exon
Length: 67
Transcript: NM_139027
Length: 67
Transcript: NM_139027
Exon
Length: 158
Transcript: NM_139027
Length: 158
Transcript: NM_139027
Exon
Length: 84
Transcript: NM_139027
Length: 84
Transcript: NM_139027
Exon
Length: 125
Transcript: NM_139027
Length: 125
Transcript: NM_139027
Exon
Length: 147
Transcript: NM_139027
Length: 147
Transcript: NM_139027
Exon
Length: 138
Transcript: NM_139027
Length: 138
Transcript: NM_139027
Exon
Length: 163
Transcript: NM_139027
Length: 163
Transcript: NM_139027
Exon
Length: 105
Transcript: NM_139027
Length: 105
Transcript: NM_139027
Exon
Length: 152
Transcript: NM_139027
Length: 152
Transcript: NM_139027
Exon
Length: 64
Transcript: NM_139027
Length: 64
Transcript: NM_139027
Exon
Length: 127
Transcript: NM_139027
Length: 127
Transcript: NM_139027
Exon
Length: 149
Transcript: NM_139027
Length: 149
Transcript: NM_139027
Exon
Length: 121
Transcript: NM_139027
Length: 121
Transcript: NM_139027
Exon
Length: 81
Transcript: NM_139027
Length: 81
Transcript: NM_139027
Exon
Length: 182
Transcript: NM_139027
Length: 182
Transcript: NM_139027
Exon
Length: 136
Transcript: NM_139027
Length: 136
Transcript: NM_139027
Exon
Length: 130
Transcript: NM_139027
Length: 130
Transcript: NM_139027
Exon
Length: 186
Transcript: NM_139027
Length: 186
Transcript: NM_139027
Exon
Length: 190
Transcript: NM_139027
Length: 190
Transcript: NM_139027
Exon
Length: 121
Transcript: NM_139027
Length: 121
Transcript: NM_139027
Exon
Length: 130
Transcript: NM_139027
Length: 130
Transcript: NM_139027
Exon
Length: 183
Transcript: NM_139027
Length: 183
Transcript: NM_139027
Exon
Length: 205
Transcript: NM_139027
Length: 205
Transcript: NM_139027
Exon
Length: 151
Transcript: NM_139027
Length: 151
Transcript: NM_139027
Exon
Length: 147
Transcript: NM_139027
Length: 147
Transcript: NM_139027
Exon
Length: 177
Transcript: NM_139027
Length: 177
Transcript: NM_139027
Exon
Length: 185
Transcript: NM_139027
Length: 185
Transcript: NM_139027
Exon
Length: 412
Transcript: NM_139027
Length: 412
Transcript: NM_139027
Intron
Length: 552
Transcript: NM_139027
Length: 552
Transcript: NM_139027
Intron
Length: 1153
Transcript: NM_139027
Length: 1153
Transcript: NM_139027
Intron
Length: 1050
Transcript: NM_139027
Length: 1050
Transcript: NM_139027
Intron
Length: 325
Transcript: NM_139027
Length: 325
Transcript: NM_139027
Intron
Length: 136
Transcript: NM_139027
Length: 136
Transcript: NM_139027
Intron
Length: 2288
Transcript: NM_139027
Length: 2288
Transcript: NM_139027
Intron
Length: 1167
Transcript: NM_139027
Length: 1167
Transcript: NM_139027
Intron
Length: 2487
Transcript: NM_139027
Length: 2487
Transcript: NM_139027
Intron
Length: 684
Transcript: NM_139027
Length: 684
Transcript: NM_139027
Intron
Length: 111
Transcript: NM_139027
Length: 111
Transcript: NM_139027
Intron
Length: 3124
Transcript: NM_139027
Length: 3124
Transcript: NM_139027
Intron
Length: 793
Transcript: NM_139027
Length: 793
Transcript: NM_139027
Intron
Length: 348
Transcript: NM_139027
Length: 348
Transcript: NM_139027
Intron
Length: 1000
Transcript: NM_139027
Length: 1000
Transcript: NM_139027
Intron
Length: 897
Transcript: NM_139027
Length: 897
Transcript: NM_139027
Intron
Length: 1873
Transcript: NM_139027
Length: 1873
Transcript: NM_139027
Intron
Length: 79
Transcript: NM_139027
Length: 79
Transcript: NM_139027
Intron
Length: 632
Transcript: NM_139027
Length: 632
Transcript: NM_139027
Intron
Length: 1301
Transcript: NM_139027
Length: 1301
Transcript: NM_139027
Intron
Length: 646
Transcript: NM_139027
Length: 646
Transcript: NM_139027
Intron
Length: 2779
Transcript: NM_139027
Length: 2779
Transcript: NM_139027
Intron
Length: 1054
Transcript: NM_139027
Length: 1054
Transcript: NM_139027
Intron
Length: 4450
Transcript: NM_139027
Length: 4450
Transcript: NM_139027
Intron
Length: 665
Transcript: NM_139027
Length: 665
Transcript: NM_139027
Intron
Length: 633
Transcript: NM_139027
Length: 633
Transcript: NM_139027
Intron
Length: 327
Transcript: NM_139027
Length: 327
Transcript: NM_139027
Intron
Length: 1190
Transcript: NM_139027
Length: 1190
Transcript: NM_139027
Intron
Length: 879
Transcript: NM_139027
Length: 879
Transcript: NM_139027
Reaction
Expected peak: 135
6.6M
refseq_ADAMTS13.F2
refseq_ADAMTS13.R2
Expected peak: 135
6.6M
refseq_ADAMTS13.F2
refseq_ADAMTS13.R2
Exon
Length: 549
Transcript: NM_139028
Length: 549
Transcript: NM_139028
Exon
Length: 67
Transcript: NM_139028
Length: 67
Transcript: NM_139028
Exon
Length: 158
Transcript: NM_139028
Length: 158
Transcript: NM_139028
Exon
Length: 84
Transcript: NM_139028
Length: 84
Transcript: NM_139028
Exon
Length: 125
Transcript: NM_139028
Length: 125
Transcript: NM_139028
Exon
Length: 147
Transcript: NM_139028
Length: 147
Transcript: NM_139028
Exon
Length: 138
Transcript: NM_139028
Length: 138
Transcript: NM_139028
Exon
Length: 482
Transcript: NM_139028
Length: 482
Transcript: NM_139028
Exon
Length: 105
Transcript: NM_139028
Length: 105
Transcript: NM_139028
Exon
Length: 152
Transcript: NM_139028
Length: 152
Transcript: NM_139028
Exon
Length: 64
Transcript: NM_139028
Length: 64
Transcript: NM_139028
Exon
Length: 127
Transcript: NM_139028
Length: 127
Transcript: NM_139028
Exon
Length: 149
Transcript: NM_139028
Length: 149
Transcript: NM_139028
Exon
Length: 121
Transcript: NM_139028
Length: 121
Transcript: NM_139028
Exon
Length: 81
Transcript: NM_139028
Length: 81
Transcript: NM_139028
Exon
Length: 182
Transcript: NM_139028
Length: 182
Transcript: NM_139028
Exon
Length: 190
Transcript: NM_139028
Length: 190
Transcript: NM_139028
Exon
Length: 121
Transcript: NM_139028
Length: 121
Transcript: NM_139028
Exon
Length: 130
Transcript: NM_139028
Length: 130
Transcript: NM_139028
Exon
Length: 174
Transcript: NM_139028
Length: 174
Transcript: NM_139028
Intron
Length: 552
Transcript: NM_139028
Length: 552
Transcript: NM_139028
Intron
Length: 1153
Transcript: NM_139028
Length: 1153
Transcript: NM_139028
Intron
Length: 1050
Transcript: NM_139028
Length: 1050
Transcript: NM_139028
Intron
Length: 325
Transcript: NM_139028
Length: 325
Transcript: NM_139028
Intron
Length: 136
Transcript: NM_139028
Length: 136
Transcript: NM_139028
Intron
Length: 2288
Transcript: NM_139028
Length: 2288
Transcript: NM_139028
Intron
Length: 928
Transcript: NM_139028
Length: 928
Transcript: NM_139028
Intron
Length: 2407
Transcript: NM_139028
Length: 2407
Transcript: NM_139028
Intron
Length: 684
Transcript: NM_139028
Length: 684
Transcript: NM_139028
Intron
Length: 111
Transcript: NM_139028
Length: 111
Transcript: NM_139028
Intron
Length: 3124
Transcript: NM_139028
Length: 3124
Transcript: NM_139028
Intron
Length: 793
Transcript: NM_139028
Length: 793
Transcript: NM_139028
Intron
Length: 348
Transcript: NM_139028
Length: 348
Transcript: NM_139028
Intron
Length: 1000
Transcript: NM_139028
Length: 1000
Transcript: NM_139028
Intron
Length: 897
Transcript: NM_139028
Length: 897
Transcript: NM_139028
Intron
Length: 4337
Transcript: NM_139028
Length: 4337
Transcript: NM_139028
Intron
Length: 646
Transcript: NM_139028
Length: 646
Transcript: NM_139028
Intron
Length: 2779
Transcript: NM_139028
Length: 2779
Transcript: NM_139028
Intron
Length: 1054
Transcript: NM_139028
Length: 1054
Transcript: NM_139028
refseq_ADAMTS13.F2
GCCTGTGCCAGCTGATTT
GCCTGTGCCAGCTGATTT
refseq_ADAMTS13.R2
CCTCGCATGTCAATGGTTC
CCTCGCATGTCAATGGTTC