1. Initial RefSeq screen / epithelium and mesenchyme (fetal colon)

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Home Supplementary data RBFOX2 enforces the mesenchymal splicing signature in normal and cancer tissues 1. Initial RefSeq screen / epithelium and mesenchyme (fetal colon)

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https://rnomics.med.usherbrooke.ca/palace?purl=/data/related/1447/gene;rna_source/524058;4964

1. Initial RefSeq screen / epithelium and mesenchyme (fetal colon) ⚙

Transcript map : AGTRAP epithelium

refseq_AGTRAP.F1 / refseq_AGTRAP.R1 (CM019542 H5) : Curve | Curve set

Exon
Length: 151
Transcript: NM_001040194

Exon
Length: 35
Transcript: NM_001040194

Exon
Length: 106
Transcript: NM_001040194

Exon
Length: 175
Transcript: NM_001040194

Exon
Length: 695
Transcript: NM_001040194

Intron
Length: 9567
Transcript: NM_001040194

Intron
Length: 1602
Transcript: NM_001040194

Intron
Length: 869
Transcript: NM_001040194

Intron
Length: 1487
Transcript: NM_001040194

Reaction
Expected peak: 115
4.6M
refseq_AGTRAP.F1
refseq_AGTRAP.R1

Exon
Length: 151
Transcript: NM_001040195

Exon
Length: 106
Transcript: NM_001040195

Exon
Length: 175
Transcript: NM_001040195

Exon
Length: 695
Transcript: NM_001040195

Intron
Length: 11204
Transcript: NM_001040195

Intron
Length: 869
Transcript: NM_001040195

Intron
Length: 1487
Transcript: NM_001040195

Reaction
Expected peak: 115
4.6M
refseq_AGTRAP.F1
refseq_AGTRAP.R1

Exon
Length: 151
Transcript: NM_001040196

Exon
Length: 35
Transcript: NM_001040196

Exon
Length: 97
Transcript: NM_001040196

Exon
Length: 106
Transcript: NM_001040196

Exon
Length: 175
Transcript: NM_001040196

Exon
Length: 695
Transcript: NM_001040196

Intron
Length: 9567
Transcript: NM_001040196

Intron
Length: 289
Transcript: NM_001040196

Intron
Length: 1216
Transcript: NM_001040196

Intron
Length: 869
Transcript: NM_001040196

Intron
Length: 1487
Transcript: NM_001040196

Reaction
Expected peak: 115
4.6M
refseq_AGTRAP.F1
refseq_AGTRAP.R1

Exon
Length: 151
Transcript: NM_001040197

Exon
Length: 35
Transcript: NM_001040197

Exon
Length: 97
Transcript: NM_001040197

Exon
Length: 106
Transcript: NM_001040197

Exon
Length: 196
Transcript: NM_001040197

Exon
Length: 695
Transcript: NM_001040197

Intron
Length: 9567
Transcript: NM_001040197

Intron
Length: 289
Transcript: NM_001040197

Intron
Length: 1216
Transcript: NM_001040197

Intron
Length: 869
Transcript: NM_001040197

Intron
Length: 1466
Transcript: NM_001040197

Reaction
Expected peak: 136
43M
refseq_AGTRAP.F1
refseq_AGTRAP.R1

Exon
Length: 151
Transcript: NM_020350

Exon
Length: 35
Transcript: NM_020350

Exon
Length: 106
Transcript: NM_020350

Exon
Length: 196
Transcript: NM_020350

Exon
Length: 695
Transcript: NM_020350

Intron
Length: 9567
Transcript: NM_020350

Intron
Length: 1602
Transcript: NM_020350

Intron
Length: 869
Transcript: NM_020350

Intron
Length: 1466
Transcript: NM_020350

Reaction
Expected peak: 136
43M
refseq_AGTRAP.F1
refseq_AGTRAP.R1

refseq_AGTRAP.R1
GGACTGCAAAGGGATCTGC

refseq_AGTRAP.F1
TGCTTCGTCTACCACATGTACC