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Home Supplementary data Tumor microenvironment associated modifications of alternative splicing RefSeq ASE screen LCM Discovery sample set epithelial signature permalink
LCM Discovery sample set epithelial signature ⚙
Reference Genes : primer pair list
Gene Forward Reverse
VIEW B2M B2M_G_3_f B2M_G_3_r
VIEW GAPDH GAPDH_G_f GAPDH_G_r
VIEW HMBS HMBS_G_3_f HMBS_G_3_r
VIEW MRPL19 MRPL19_G_3_f MRPL19_G_3_r
VIEW PSMC4 PSMC4_G_1_f PSMC4_G_1_r
VIEW PUM1 PUM1_G_2_f PUM1_G_2_r
VIEW SDHA SDHA_G_f SDHA_G_r
VIEW YWHAZ YWHAZ_G_f YWHAZ_G_r
QPCR Relative Expression Quantification : NF pairwise rate map
QPCR Relative Expression Quantification : NF Histogram
QPCR Relative Expression Quantification : Reference Genes list

Reference Genes For Relative Expression Analysis

  • MRPL19_G_3_f MRPL19_G_3_r
  • GAPDH_G_f GAPDH_G_r
  • YWHAZ_G_f YWHAZ_G_r
QPCR Relative Expression Quantification : Reports

Comments on the experiments

  • same sample as discovery screen LCM epithelial
  • same sample as discovery screen LCM epithelial
  • same sample as discovery screen LCM epithelial
  • same sample as discovery screen LCM epithelial
  • same sample as discovery screen LCM epithelial
  • same sample as discovery screen LCM epithelial
  • same sample as discovery screen LCM epithelial
  • same sample as discovery screen LCM epithelial
  • same sample as discovery screen LCM epithelial
QPCR Genorm : M -- average pairwise expression ratio
Primer Pair 8 7 6 5 4 3 2 1
SDHA_G_f SDHA_G_r 3.407
HMBS_G_3_f HMBS_G_3_r 3.342 3.313
MRPL19_G_3_f MRPL19_G_3_r 2.598 2.662 2.727
PSMC4_G_1_f PSMC4_G_1_r 2.242 2.195 2.116 2.302
PUM1_G_2_f PUM1_G_2_r 2.082 1.800 1.452 1.130 0.879
B2M_G_3_f B2M_G_3_r 2.412 2.118 1.727 1.289 0.824 0.824
YWHAZ_G_f YWHAZ_G_r 2.036 1.774 1.436 1.110 0.770 0.770
GAPDH_G_f GAPDH_G_r 2.278 1.987 1.609 1.185 0.743 0.743

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