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LGFUS Public Data
Identification of alternative splicing markers for breast cancer
3. Breast Blind Set
Transcript map
: APP
Exon
Length: 251
Transcript: APP.aAug05
Length: 251
Transcript: APP.aAug05
Exon
Length: 168
Transcript: APP.aAug05
Length: 168
Transcript: APP.aAug05
Exon
Length: 130
Transcript: APP.aAug05
Length: 130
Transcript: APP.aAug05
Exon
Length: 113
Transcript: APP.aAug05
Length: 113
Transcript: APP.aAug05
Exon
Length: 194
Transcript: APP.aAug05
Length: 194
Transcript: APP.aAug05
Exon
Length: 203
Transcript: APP.aAug05
Length: 203
Transcript: APP.aAug05
Exon
Length: 168
Transcript: APP.aAug05
Length: 168
Transcript: APP.aAug05
Exon
Length: 57
Transcript: APP.aAug05
Length: 57
Transcript: APP.aAug05
Exon
Length: 134
Transcript: APP.aAug05
Length: 134
Transcript: APP.aAug05
Exon
Length: 75
Transcript: APP.aAug05
Length: 75
Transcript: APP.aAug05
Exon
Length: 159
Transcript: APP.aAug05
Length: 159
Transcript: APP.aAug05
Exon
Length: 129
Transcript: APP.aAug05
Length: 129
Transcript: APP.aAug05
Exon
Length: 100
Transcript: APP.aAug05
Length: 100
Transcript: APP.aAug05
Exon
Length: 222
Transcript: APP.aAug05
Length: 222
Transcript: APP.aAug05
Exon
Length: 54
Transcript: APP.aAug05
Length: 54
Transcript: APP.aAug05
Exon
Length: 101
Transcript: APP.aAug05
Length: 101
Transcript: APP.aAug05
Exon
Length: 147
Transcript: APP.aAug05
Length: 147
Transcript: APP.aAug05
Exon
Length: 1221
Transcript: APP.aAug05
Length: 1221
Transcript: APP.aAug05
Intron
Length: 58418
Transcript: APP.aAug05
Length: 58418
Transcript: APP.aAug05
Intron
Length: 21907
Transcript: APP.aAug05
Length: 21907
Transcript: APP.aAug05
Intron
Length: 36594
Transcript: APP.aAug05
Length: 36594
Transcript: APP.aAug05
Intron
Length: 2042
Transcript: APP.aAug05
Length: 2042
Transcript: APP.aAug05
Intron
Length: 28957
Transcript: APP.aAug05
Length: 28957
Transcript: APP.aAug05
Intron
Length: 21658
Transcript: APP.aAug05
Length: 21658
Transcript: APP.aAug05
Intron
Length: 2598
Transcript: APP.aAug05
Length: 2598
Transcript: APP.aAug05
Intron
Length: 14884
Transcript: APP.aAug05
Length: 14884
Transcript: APP.aAug05
Intron
Length: 6315
Transcript: APP.aAug05
Length: 6315
Transcript: APP.aAug05
Intron
Length: 725
Transcript: APP.aAug05
Length: 725
Transcript: APP.aAug05
Intron
Length: 19313
Transcript: APP.aAug05
Length: 19313
Transcript: APP.aAug05
Intron
Length: 937
Transcript: APP.aAug05
Length: 937
Transcript: APP.aAug05
Intron
Length: 42629
Transcript: APP.aAug05
Length: 42629
Transcript: APP.aAug05
Intron
Length: 6663
Transcript: APP.aAug05
Length: 6663
Transcript: APP.aAug05
Intron
Length: 7350
Transcript: APP.aAug05
Length: 7350
Transcript: APP.aAug05
Intron
Length: 5704
Transcript: APP.aAug05
Length: 5704
Transcript: APP.aAug05
Intron
Length: 9951
Transcript: APP.aAug05
Length: 9951
Transcript: APP.aAug05
Reaction
Expected peak: 343
Associated peak: 368,370,371,372,373,374,375,376,377,378,380
Repeated 55 time
Molarity: 20.22M
Forward: APP.F9
Reverse: APP.R1
Expected peak: 343
Associated peak: 368,370,371,372,373,374,375,376,377,378,380
Repeated 55 time
Molarity: 20.22M
Forward: APP.F9
Reverse: APP.R1
Exon
Length: 257
Transcript: APP.bAug05
Length: 257
Transcript: APP.bAug05
Exon
Length: 168
Transcript: APP.bAug05
Length: 168
Transcript: APP.bAug05
Exon
Length: 130
Transcript: APP.bAug05
Length: 130
Transcript: APP.bAug05
Exon
Length: 113
Transcript: APP.bAug05
Length: 113
Transcript: APP.bAug05
Exon
Length: 194
Transcript: APP.bAug05
Length: 194
Transcript: APP.bAug05
Exon
Length: 203
Transcript: APP.bAug05
Length: 203
Transcript: APP.bAug05
Exon
Length: 168
Transcript: APP.bAug05
Length: 168
Transcript: APP.bAug05
Exon
Length: 134
Transcript: APP.bAug05
Length: 134
Transcript: APP.bAug05
Exon
Length: 75
Transcript: APP.bAug05
Length: 75
Transcript: APP.bAug05
Exon
Length: 159
Transcript: APP.bAug05
Length: 159
Transcript: APP.bAug05
Exon
Length: 129
Transcript: APP.bAug05
Length: 129
Transcript: APP.bAug05
Exon
Length: 100
Transcript: APP.bAug05
Length: 100
Transcript: APP.bAug05
Exon
Length: 222
Transcript: APP.bAug05
Length: 222
Transcript: APP.bAug05
Exon
Length: 54
Transcript: APP.bAug05
Length: 54
Transcript: APP.bAug05
Exon
Length: 101
Transcript: APP.bAug05
Length: 101
Transcript: APP.bAug05
Exon
Length: 147
Transcript: APP.bAug05
Length: 147
Transcript: APP.bAug05
Exon
Length: 1226
Transcript: APP.bAug05
Length: 1226
Transcript: APP.bAug05
Intron
Length: 58418
Transcript: APP.bAug05
Length: 58418
Transcript: APP.bAug05
Intron
Length: 21907
Transcript: APP.bAug05
Length: 21907
Transcript: APP.bAug05
Intron
Length: 36594
Transcript: APP.bAug05
Length: 36594
Transcript: APP.bAug05
Intron
Length: 2042
Transcript: APP.bAug05
Length: 2042
Transcript: APP.bAug05
Intron
Length: 28957
Transcript: APP.bAug05
Length: 28957
Transcript: APP.bAug05
Intron
Length: 21658
Transcript: APP.bAug05
Length: 21658
Transcript: APP.bAug05
Intron
Length: 17539
Transcript: APP.bAug05
Length: 17539
Transcript: APP.bAug05
Intron
Length: 6315
Transcript: APP.bAug05
Length: 6315
Transcript: APP.bAug05
Intron
Length: 725
Transcript: APP.bAug05
Length: 725
Transcript: APP.bAug05
Intron
Length: 19313
Transcript: APP.bAug05
Length: 19313
Transcript: APP.bAug05
Intron
Length: 937
Transcript: APP.bAug05
Length: 937
Transcript: APP.bAug05
Intron
Length: 42629
Transcript: APP.bAug05
Length: 42629
Transcript: APP.bAug05
Intron
Length: 6663
Transcript: APP.bAug05
Length: 6663
Transcript: APP.bAug05
Intron
Length: 7350
Transcript: APP.bAug05
Length: 7350
Transcript: APP.bAug05
Intron
Length: 5704
Transcript: APP.bAug05
Length: 5704
Transcript: APP.bAug05
Intron
Length: 9951
Transcript: APP.bAug05
Length: 9951
Transcript: APP.bAug05
Reaction
Expected peak: 286
Associated peak: 295,296,297,298,299,300
Repeated 55 time
Molarity: 29.93M
Forward: APP.F9
Reverse: APP.R1
Expected peak: 286
Associated peak: 295,296,297,298,299,300
Repeated 55 time
Molarity: 29.93M
Forward: APP.F9
Reverse: APP.R1
Exon
Length: 251
Transcript: APP.cAug05
Length: 251
Transcript: APP.cAug05
Exon
Length: 168
Transcript: APP.cAug05
Length: 168
Transcript: APP.cAug05
Exon
Length: 130
Transcript: APP.cAug05
Length: 130
Transcript: APP.cAug05
Exon
Length: 113
Transcript: APP.cAug05
Length: 113
Transcript: APP.cAug05
Exon
Length: 194
Transcript: APP.cAug05
Length: 194
Transcript: APP.cAug05
Exon
Length: 203
Transcript: APP.cAug05
Length: 203
Transcript: APP.cAug05
Exon
Length: 134
Transcript: APP.cAug05
Length: 134
Transcript: APP.cAug05
Exon
Length: 75
Transcript: APP.cAug05
Length: 75
Transcript: APP.cAug05
Exon
Length: 159
Transcript: APP.cAug05
Length: 159
Transcript: APP.cAug05
Exon
Length: 129
Transcript: APP.cAug05
Length: 129
Transcript: APP.cAug05
Exon
Length: 100
Transcript: APP.cAug05
Length: 100
Transcript: APP.cAug05
Exon
Length: 222
Transcript: APP.cAug05
Length: 222
Transcript: APP.cAug05
Exon
Length: 54
Transcript: APP.cAug05
Length: 54
Transcript: APP.cAug05
Exon
Length: 101
Transcript: APP.cAug05
Length: 101
Transcript: APP.cAug05
Exon
Length: 147
Transcript: APP.cAug05
Length: 147
Transcript: APP.cAug05
Exon
Length: 1221
Transcript: APP.cAug05
Length: 1221
Transcript: APP.cAug05
Intron
Length: 58418
Transcript: APP.cAug05
Length: 58418
Transcript: APP.cAug05
Intron
Length: 21907
Transcript: APP.cAug05
Length: 21907
Transcript: APP.cAug05
Intron
Length: 36594
Transcript: APP.cAug05
Length: 36594
Transcript: APP.cAug05
Intron
Length: 2042
Transcript: APP.cAug05
Length: 2042
Transcript: APP.cAug05
Intron
Length: 28957
Transcript: APP.cAug05
Length: 28957
Transcript: APP.cAug05
Intron
Length: 39365
Transcript: APP.cAug05
Length: 39365
Transcript: APP.cAug05
Intron
Length: 6315
Transcript: APP.cAug05
Length: 6315
Transcript: APP.cAug05
Intron
Length: 725
Transcript: APP.cAug05
Length: 725
Transcript: APP.cAug05
Intron
Length: 19313
Transcript: APP.cAug05
Length: 19313
Transcript: APP.cAug05
Intron
Length: 937
Transcript: APP.cAug05
Length: 937
Transcript: APP.cAug05
Intron
Length: 42629
Transcript: APP.cAug05
Length: 42629
Transcript: APP.cAug05
Intron
Length: 6663
Transcript: APP.cAug05
Length: 6663
Transcript: APP.cAug05
Intron
Length: 7350
Transcript: APP.cAug05
Length: 7350
Transcript: APP.cAug05
Intron
Length: 5704
Transcript: APP.cAug05
Length: 5704
Transcript: APP.cAug05
Intron
Length: 9951
Transcript: APP.cAug05
Length: 9951
Transcript: APP.cAug05
Reaction
Expected peak: 118
Associated peak: 128,129,130,131,132
Repeated 55 time
Molarity: 9.18M
Forward: APP.F9
Reverse: APP.R1
Expected peak: 118
Associated peak: 128,129,130,131,132
Repeated 55 time
Molarity: 9.18M
Forward: APP.F9
Reverse: APP.R1
Exon
Length: 207
Transcript: APP.dAug05
Length: 207
Transcript: APP.dAug05
Exon
Length: 130
Transcript: APP.dAug05
Length: 130
Transcript: APP.dAug05
Exon
Length: 113
Transcript: APP.dAug05
Length: 113
Transcript: APP.dAug05
Exon
Length: 194
Transcript: APP.dAug05
Length: 194
Transcript: APP.dAug05
Exon
Length: 203
Transcript: APP.dAug05
Length: 203
Transcript: APP.dAug05
Exon
Length: 134
Transcript: APP.dAug05
Length: 134
Transcript: APP.dAug05
Exon
Length: 75
Transcript: APP.dAug05
Length: 75
Transcript: APP.dAug05
Exon
Length: 159
Transcript: APP.dAug05
Length: 159
Transcript: APP.dAug05
Exon
Length: 129
Transcript: APP.dAug05
Length: 129
Transcript: APP.dAug05
Exon
Length: 100
Transcript: APP.dAug05
Length: 100
Transcript: APP.dAug05
Exon
Length: 222
Transcript: APP.dAug05
Length: 222
Transcript: APP.dAug05
Exon
Length: 54
Transcript: APP.dAug05
Length: 54
Transcript: APP.dAug05
Exon
Length: 101
Transcript: APP.dAug05
Length: 101
Transcript: APP.dAug05
Exon
Length: 147
Transcript: APP.dAug05
Length: 147
Transcript: APP.dAug05
Exon
Length: 966
Transcript: APP.dAug05
Length: 966
Transcript: APP.dAug05
Intron
Length: 80493
Transcript: APP.dAug05
Length: 80493
Transcript: APP.dAug05
Intron
Length: 36594
Transcript: APP.dAug05
Length: 36594
Transcript: APP.dAug05
Intron
Length: 2042
Transcript: APP.dAug05
Length: 2042
Transcript: APP.dAug05
Intron
Length: 28957
Transcript: APP.dAug05
Length: 28957
Transcript: APP.dAug05
Intron
Length: 39365
Transcript: APP.dAug05
Length: 39365
Transcript: APP.dAug05
Intron
Length: 6315
Transcript: APP.dAug05
Length: 6315
Transcript: APP.dAug05
Intron
Length: 725
Transcript: APP.dAug05
Length: 725
Transcript: APP.dAug05
Intron
Length: 19313
Transcript: APP.dAug05
Length: 19313
Transcript: APP.dAug05
Intron
Length: 937
Transcript: APP.dAug05
Length: 937
Transcript: APP.dAug05
Intron
Length: 42629
Transcript: APP.dAug05
Length: 42629
Transcript: APP.dAug05
Intron
Length: 6663
Transcript: APP.dAug05
Length: 6663
Transcript: APP.dAug05
Intron
Length: 7350
Transcript: APP.dAug05
Length: 7350
Transcript: APP.dAug05
Intron
Length: 5704
Transcript: APP.dAug05
Length: 5704
Transcript: APP.dAug05
Intron
Length: 9951
Transcript: APP.dAug05
Length: 9951
Transcript: APP.dAug05
Reaction
Expected peak: 118
Associated peak: 128,129,130,131,132
Repeated 55 time
Molarity: 9.18M
Forward: APP.F9
Reverse: APP.R1
Expected peak: 118
Associated peak: 128,129,130,131,132
Repeated 55 time
Molarity: 9.18M
Forward: APP.F9
Reverse: APP.R1
Exon
Length: 33
Transcript: APP.eAug05
Length: 33
Transcript: APP.eAug05
Exon
Length: 203
Transcript: APP.eAug05
Length: 203
Transcript: APP.eAug05
Exon
Length: 57
Transcript: APP.eAug05
Length: 57
Transcript: APP.eAug05
Exon
Length: 134
Transcript: APP.eAug05
Length: 134
Transcript: APP.eAug05
Exon
Length: 75
Transcript: APP.eAug05
Length: 75
Transcript: APP.eAug05
Exon
Length: 159
Transcript: APP.eAug05
Length: 159
Transcript: APP.eAug05
Exon
Length: 129
Transcript: APP.eAug05
Length: 129
Transcript: APP.eAug05
Exon
Length: 100
Transcript: APP.eAug05
Length: 100
Transcript: APP.eAug05
Exon
Length: 222
Transcript: APP.eAug05
Length: 222
Transcript: APP.eAug05
Exon
Length: 101
Transcript: APP.eAug05
Length: 101
Transcript: APP.eAug05
Exon
Length: 147
Transcript: APP.eAug05
Length: 147
Transcript: APP.eAug05
Exon
Length: 136
Transcript: APP.eAug05
Length: 136
Transcript: APP.eAug05
Exon
Length: 184
Transcript: APP.eAug05
Length: 184
Transcript: APP.eAug05
Intron
Length: 28957
Transcript: APP.eAug05
Length: 28957
Transcript: APP.eAug05
Intron
Length: 24424
Transcript: APP.eAug05
Length: 24424
Transcript: APP.eAug05
Intron
Length: 14884
Transcript: APP.eAug05
Length: 14884
Transcript: APP.eAug05
Intron
Length: 6315
Transcript: APP.eAug05
Length: 6315
Transcript: APP.eAug05
Intron
Length: 725
Transcript: APP.eAug05
Length: 725
Transcript: APP.eAug05
Intron
Length: 19313
Transcript: APP.eAug05
Length: 19313
Transcript: APP.eAug05
Intron
Length: 937
Transcript: APP.eAug05
Length: 937
Transcript: APP.eAug05
Intron
Length: 42629
Transcript: APP.eAug05
Length: 42629
Transcript: APP.eAug05
Intron
Length: 14067
Transcript: APP.eAug05
Length: 14067
Transcript: APP.eAug05
Intron
Length: 5704
Transcript: APP.eAug05
Length: 5704
Transcript: APP.eAug05
Intron
Length: 9951
Transcript: APP.eAug05
Length: 9951
Transcript: APP.eAug05
Intron
Length: 54
Transcript: APP.eAug05
Length: 54
Transcript: APP.eAug05
Reaction
Expected peak: 175
Associated peak: None
Repeated 55 time
Molarity: 0.00M
Forward: APP.F9
Reverse: APP.R1
Expected peak: 175
Associated peak: None
Repeated 55 time
Molarity: 0.00M
Forward: APP.F9
Reverse: APP.R1
Exon
Length: 118
Transcript: APP.fAug05
Length: 118
Transcript: APP.fAug05
Exon
Length: 113
Transcript: APP.fAug05
Length: 113
Transcript: APP.fAug05
Exon
Length: 194
Transcript: APP.fAug05
Length: 194
Transcript: APP.fAug05
Exon
Length: 203
Transcript: APP.fAug05
Length: 203
Transcript: APP.fAug05
Exon
Length: 168
Transcript: APP.fAug05
Length: 168
Transcript: APP.fAug05
Exon
Length: 134
Transcript: APP.fAug05
Length: 134
Transcript: APP.fAug05
Exon
Length: 75
Transcript: APP.fAug05
Length: 75
Transcript: APP.fAug05
Exon
Length: 159
Transcript: APP.fAug05
Length: 159
Transcript: APP.fAug05
Exon
Length: 129
Transcript: APP.fAug05
Length: 129
Transcript: APP.fAug05
Exon
Length: 100
Transcript: APP.fAug05
Length: 100
Transcript: APP.fAug05
Exon
Length: 544
Transcript: APP.fAug05
Length: 544
Transcript: APP.fAug05
Intron
Length: 36594
Transcript: APP.fAug05
Length: 36594
Transcript: APP.fAug05
Intron
Length: 2042
Transcript: APP.fAug05
Length: 2042
Transcript: APP.fAug05
Intron
Length: 28957
Transcript: APP.fAug05
Length: 28957
Transcript: APP.fAug05
Intron
Length: 21658
Transcript: APP.fAug05
Length: 21658
Transcript: APP.fAug05
Intron
Length: 17539
Transcript: APP.fAug05
Length: 17539
Transcript: APP.fAug05
Intron
Length: 6315
Transcript: APP.fAug05
Length: 6315
Transcript: APP.fAug05
Intron
Length: 725
Transcript: APP.fAug05
Length: 725
Transcript: APP.fAug05
Intron
Length: 19313
Transcript: APP.fAug05
Length: 19313
Transcript: APP.fAug05
Intron
Length: 937
Transcript: APP.fAug05
Length: 937
Transcript: APP.fAug05
Intron
Length: 8613
Transcript: APP.fAug05
Length: 8613
Transcript: APP.fAug05
Reaction
Expected peak: 286
Associated peak: 295,296,297,298,299,300
Repeated 55 time
Molarity: 29.93M
Forward: APP.F9
Reverse: APP.R1
Expected peak: 286
Associated peak: 295,296,297,298,299,300
Repeated 55 time
Molarity: 29.93M
Forward: APP.F9
Reverse: APP.R1
Exon
Length: 183
Transcript: APP.gAug05
Length: 183
Transcript: APP.gAug05
Exon
Length: 168
Transcript: APP.gAug05
Length: 168
Transcript: APP.gAug05
Exon
Length: 130
Transcript: APP.gAug05
Length: 130
Transcript: APP.gAug05
Exon
Length: 113
Transcript: APP.gAug05
Length: 113
Transcript: APP.gAug05
Exon
Length: 194
Transcript: APP.gAug05
Length: 194
Transcript: APP.gAug05
Exon
Length: 203
Transcript: APP.gAug05
Length: 203
Transcript: APP.gAug05
Exon
Length: 305
Transcript: APP.gAug05
Length: 305
Transcript: APP.gAug05
Intron
Length: 58418
Transcript: APP.gAug05
Length: 58418
Transcript: APP.gAug05
Intron
Length: 21907
Transcript: APP.gAug05
Length: 21907
Transcript: APP.gAug05
Intron
Length: 36594
Transcript: APP.gAug05
Length: 36594
Transcript: APP.gAug05
Intron
Length: 2042
Transcript: APP.gAug05
Length: 2042
Transcript: APP.gAug05
Intron
Length: 28957
Transcript: APP.gAug05
Length: 28957
Transcript: APP.gAug05
Intron
Length: 11927
Transcript: APP.gAug05
Length: 11927
Transcript: APP.gAug05
Exon
Length: 105
Transcript: APP.hAug05
Length: 105
Transcript: APP.hAug05
Exon
Length: 129
Transcript: APP.hAug05
Length: 129
Transcript: APP.hAug05
Exon
Length: 100
Transcript: APP.hAug05
Length: 100
Transcript: APP.hAug05
Exon
Length: 222
Transcript: APP.hAug05
Length: 222
Transcript: APP.hAug05
Exon
Length: 54
Transcript: APP.hAug05
Length: 54
Transcript: APP.hAug05
Exon
Length: 101
Transcript: APP.hAug05
Length: 101
Transcript: APP.hAug05
Exon
Length: 147
Transcript: APP.hAug05
Length: 147
Transcript: APP.hAug05
Exon
Length: 136
Transcript: APP.hAug05
Length: 136
Transcript: APP.hAug05
Exon
Length: 27
Transcript: APP.hAug05
Length: 27
Transcript: APP.hAug05
Intron
Length: 14637
Transcript: APP.hAug05
Length: 14637
Transcript: APP.hAug05
Intron
Length: 937
Transcript: APP.hAug05
Length: 937
Transcript: APP.hAug05
Intron
Length: 42629
Transcript: APP.hAug05
Length: 42629
Transcript: APP.hAug05
Intron
Length: 6663
Transcript: APP.hAug05
Length: 6663
Transcript: APP.hAug05
Intron
Length: 7350
Transcript: APP.hAug05
Length: 7350
Transcript: APP.hAug05
Intron
Length: 5704
Transcript: APP.hAug05
Length: 5704
Transcript: APP.hAug05
Intron
Length: 9951
Transcript: APP.hAug05
Length: 9951
Transcript: APP.hAug05
Intron
Length: 54
Transcript: APP.hAug05
Length: 54
Transcript: APP.hAug05
Exon
Length: 203
Transcript: APP.iAug05
Length: 203
Transcript: APP.iAug05
Exon
Length: 168
Transcript: APP.iAug05
Length: 168
Transcript: APP.iAug05
Exon
Length: 229
Transcript: APP.iAug05
Length: 229
Transcript: APP.iAug05
Intron
Length: 21658
Transcript: APP.iAug05
Length: 21658
Transcript: APP.iAug05
Intron
Length: 2598
Transcript: APP.iAug05
Length: 2598
Transcript: APP.iAug05
Exon
Length: 112
Transcript: APP.jAug05
Length: 112
Transcript: APP.jAug05
Exon
Length: 57
Transcript: APP.jAug05
Length: 57
Transcript: APP.jAug05
Exon
Length: 134
Transcript: APP.jAug05
Length: 134
Transcript: APP.jAug05
Exon
Length: 75
Transcript: APP.jAug05
Length: 75
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Transcript: APP.shed1.aAug05
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Transcript: APP.shed2.aAug05
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Transcript: APP.shed2.aAug05
APP.F9
ACCACCACCACCACAGAGTC
ACCACCACCACCACAGAGTC
APP.R1
GGGCATGTTCATTCTCATCC
GGGCATGTTCATTCTCATCC