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Multiple and Specific mRNA Processing Targets for the Major Human hnRNP Proteins 
Transcript map : APAF1
Exon
Length: 536
Transcript: APAF1.aAug05
Exon
Length: 179
Transcript: APAF1.aAug05
Exon
Length: 190
Transcript: APAF1.aAug05
Exon
Length: 198
Transcript: APAF1.aAug05
Exon
Length: 184
Transcript: APAF1.aAug05
Exon
Length: 113
Transcript: APAF1.aAug05
Exon
Length: 132
Transcript: APAF1.aAug05
Exon
Length: 239
Transcript: APAF1.aAug05
Exon
Length: 168
Transcript: APAF1.aAug05
Exon
Length: 132
Transcript: APAF1.aAug05
Exon
Length: 114
Transcript: APAF1.aAug05
Exon
Length: 185
Transcript: APAF1.aAug05
Exon
Length: 127
Transcript: APAF1.aAug05
Exon
Length: 126
Transcript: APAF1.aAug05
Exon
Length: 132
Transcript: APAF1.aAug05
Exon
Length: 126
Transcript: APAF1.aAug05
Exon
Length: 162
Transcript: APAF1.aAug05
Exon
Length: 129
Transcript: APAF1.aAug05
Exon
Length: 126
Transcript: APAF1.aAug05
Exon
Length: 120
Transcript: APAF1.aAug05
Exon
Length: 117
Transcript: APAF1.aAug05
Exon
Length: 126
Transcript: APAF1.aAug05
Exon
Length: 120
Transcript: APAF1.aAug05
Exon
Length: 126
Transcript: APAF1.aAug05
Exon
Length: 126
Transcript: APAF1.aAug05
Exon
Length: 144
Transcript: APAF1.aAug05
Exon
Length: 3013
Transcript: APAF1.aAug05
Intron
Length: 2483
Transcript: APAF1.aAug05
Intron
Length: 128
Transcript: APAF1.aAug05
Intron
Length: 671
Transcript: APAF1.aAug05
Intron
Length: 9475
Transcript: APAF1.aAug05
Intron
Length: 3112
Transcript: APAF1.aAug05
Intron
Length: 106
Transcript: APAF1.aAug05
Intron
Length: 2746
Transcript: APAF1.aAug05
Intron
Length: 398
Transcript: APAF1.aAug05
Intron
Length: 1155
Transcript: APAF1.aAug05
Intron
Length: 3328
Transcript: APAF1.aAug05
Intron
Length: 448
Transcript: APAF1.aAug05
Intron
Length: 5705
Transcript: APAF1.aAug05
Intron
Length: 2725
Transcript: APAF1.aAug05
Intron
Length: 2740
Transcript: APAF1.aAug05
Intron
Length: 3473
Transcript: APAF1.aAug05
Intron
Length: 12534
Transcript: APAF1.aAug05
Intron
Length: 3801
Transcript: APAF1.aAug05
Intron
Length: 2985
Transcript: APAF1.aAug05
Intron
Length: 1974
Transcript: APAF1.aAug05
Intron
Length: 3614
Transcript: APAF1.aAug05
Intron
Length: 2991
Transcript: APAF1.aAug05
Intron
Length: 7640
Transcript: APAF1.aAug05
Intron
Length: 326
Transcript: APAF1.aAug05
Intron
Length: 1650
Transcript: APAF1.aAug05
Intron
Length: 1632
Transcript: APAF1.aAug05
Intron
Length: 5103
Transcript: APAF1.aAug05
Reaction
Expected peak: 267
Associated peak: 273,274,275,276,277,278,279,280,281
Repeated 138 time
Molarity: 18.62M
Forward: APAF1.F8
Reverse: APAF1.R8
Reaction
Expected peak: 897
Associated peak: 808,809,812,813,814,817,819,821,822,823,824,827,828,830,831,833,836,837,839,840,842,843,844,845,846,847,848,849,850,851,852,853,855,856,857,858,860,862,863,865,867,869,870,871,873,875,876,880
Repeated 211 time
Molarity: 12.49M
Forward: APAF1-3
Reverse: APAF1-4
Exon
Length: 536
Transcript: APAF1.bAug05
Exon
Length: 179
Transcript: APAF1.bAug05
Exon
Length: 157
Transcript: APAF1.bAug05
Exon
Length: 198
Transcript: APAF1.bAug05
Exon
Length: 184
Transcript: APAF1.bAug05
Exon
Length: 113
Transcript: APAF1.bAug05
Exon
Length: 132
Transcript: APAF1.bAug05
Exon
Length: 239
Transcript: APAF1.bAug05
Exon
Length: 168
Transcript: APAF1.bAug05
Exon
Length: 132
Transcript: APAF1.bAug05
Exon
Length: 114
Transcript: APAF1.bAug05
Exon
Length: 185
Transcript: APAF1.bAug05
Exon
Length: 127
Transcript: APAF1.bAug05
Exon
Length: 126
Transcript: APAF1.bAug05
Exon
Length: 132
Transcript: APAF1.bAug05
Exon
Length: 126
Transcript: APAF1.bAug05
Exon
Length: 162
Transcript: APAF1.bAug05
Exon
Length: 129
Transcript: APAF1.bAug05
Exon
Length: 126
Transcript: APAF1.bAug05
Exon
Length: 120
Transcript: APAF1.bAug05
Exon
Length: 117
Transcript: APAF1.bAug05
Exon
Length: 126
Transcript: APAF1.bAug05
Exon
Length: 120
Transcript: APAF1.bAug05
Exon
Length: 126
Transcript: APAF1.bAug05
Exon
Length: 126
Transcript: APAF1.bAug05
Exon
Length: 144
Transcript: APAF1.bAug05
Exon
Length: 3013
Transcript: APAF1.bAug05
Intron
Length: 2483
Transcript: APAF1.bAug05
Intron
Length: 128
Transcript: APAF1.bAug05
Intron
Length: 704
Transcript: APAF1.bAug05
Intron
Length: 9475
Transcript: APAF1.bAug05
Intron
Length: 3112
Transcript: APAF1.bAug05
Intron
Length: 106
Transcript: APAF1.bAug05
Intron
Length: 2746
Transcript: APAF1.bAug05
Intron
Length: 398
Transcript: APAF1.bAug05
Intron
Length: 1155
Transcript: APAF1.bAug05
Intron
Length: 3328
Transcript: APAF1.bAug05
Intron
Length: 448
Transcript: APAF1.bAug05
Intron
Length: 5705
Transcript: APAF1.bAug05
Intron
Length: 2725
Transcript: APAF1.bAug05
Intron
Length: 2740
Transcript: APAF1.bAug05
Intron
Length: 3473
Transcript: APAF1.bAug05
Intron
Length: 12534
Transcript: APAF1.bAug05
Intron
Length: 3801
Transcript: APAF1.bAug05
Intron
Length: 2985
Transcript: APAF1.bAug05
Intron
Length: 1974
Transcript: APAF1.bAug05
Intron
Length: 3614
Transcript: APAF1.bAug05
Intron
Length: 2991
Transcript: APAF1.bAug05
Intron
Length: 7640
Transcript: APAF1.bAug05
Intron
Length: 326
Transcript: APAF1.bAug05
Intron
Length: 1650
Transcript: APAF1.bAug05
Intron
Length: 1632
Transcript: APAF1.bAug05
Intron
Length: 5103
Transcript: APAF1.bAug05
Reaction
Expected peak: 267
Associated peak: 273,274,275,276,277,278,279,280,281
Repeated 138 time
Molarity: 18.62M
Forward: APAF1.F8
Reverse: APAF1.R8
Reaction
Expected peak: 897
Associated peak: 808,809,812,813,814,817,819,821,822,823,824,827,828,830,831,833,836,837,839,840,842,843,844,845,846,847,848,849,850,851,852,853,855,856,857,858,860,862,863,865,867,869,870,871,873,875,876,880
Repeated 211 time
Molarity: 12.49M
Forward: APAF1-3
Reverse: APAF1-4
Exon
Length: 536
Transcript: APAF1.cAug05
Exon
Length: 179
Transcript: APAF1.cAug05
Exon
Length: 190
Transcript: APAF1.cAug05
Exon
Length: 198
Transcript: APAF1.cAug05
Exon
Length: 184
Transcript: APAF1.cAug05
Exon
Length: 113
Transcript: APAF1.cAug05
Exon
Length: 132
Transcript: APAF1.cAug05
Exon
Length: 239
Transcript: APAF1.cAug05
Exon
Length: 168
Transcript: APAF1.cAug05
Exon
Length: 132
Transcript: APAF1.cAug05
Exon
Length: 114
Transcript: APAF1.cAug05
Exon
Length: 185
Transcript: APAF1.cAug05
Exon
Length: 127
Transcript: APAF1.cAug05
Exon
Length: 126
Transcript: APAF1.cAug05
Exon
Length: 132
Transcript: APAF1.cAug05
Exon
Length: 126
Transcript: APAF1.cAug05
Exon
Length: 162
Transcript: APAF1.cAug05
Exon
Length: 126
Transcript: APAF1.cAug05
Exon
Length: 120
Transcript: APAF1.cAug05
Exon
Length: 117
Transcript: APAF1.cAug05
Exon
Length: 126
Transcript: APAF1.cAug05
Exon
Length: 120
Transcript: APAF1.cAug05
Exon
Length: 126
Transcript: APAF1.cAug05
Exon
Length: 126
Transcript: APAF1.cAug05
Exon
Length: 144
Transcript: APAF1.cAug05
Exon
Length: 3013
Transcript: APAF1.cAug05
Intron
Length: 2483
Transcript: APAF1.cAug05
Intron
Length: 128
Transcript: APAF1.cAug05
Intron
Length: 671
Transcript: APAF1.cAug05
Intron
Length: 9475
Transcript: APAF1.cAug05
Intron
Length: 3112
Transcript: APAF1.cAug05
Intron
Length: 106
Transcript: APAF1.cAug05
Intron
Length: 2746
Transcript: APAF1.cAug05
Intron
Length: 398
Transcript: APAF1.cAug05
Intron
Length: 1155
Transcript: APAF1.cAug05
Intron
Length: 3328
Transcript: APAF1.cAug05
Intron
Length: 448
Transcript: APAF1.cAug05
Intron
Length: 5705
Transcript: APAF1.cAug05
Intron
Length: 2725
Transcript: APAF1.cAug05
Intron
Length: 2740
Transcript: APAF1.cAug05
Intron
Length: 3473
Transcript: APAF1.cAug05
Intron
Length: 12534
Transcript: APAF1.cAug05
Intron
Length: 6915
Transcript: APAF1.cAug05
Intron
Length: 1974
Transcript: APAF1.cAug05
Intron
Length: 3614
Transcript: APAF1.cAug05
Intron
Length: 2991
Transcript: APAF1.cAug05
Intron
Length: 7640
Transcript: APAF1.cAug05
Intron
Length: 326
Transcript: APAF1.cAug05
Intron
Length: 1650
Transcript: APAF1.cAug05
Intron
Length: 1632
Transcript: APAF1.cAug05
Intron
Length: 5103
Transcript: APAF1.cAug05
Reaction
Expected peak: 138
Associated peak: 143,144,145,146,147,148,149,150
Repeated 138 time
Molarity: 22.50M
Forward: APAF1.F8
Reverse: APAF1.R8
Reaction
Expected peak: 768
Associated peak: 696,700,708,709,710,711,716,717,718,719,720,721,723,724,725,726,727,728,729,731,732,733,734,735,736,739,740,741,742,743,744,745,747,748,749,750,751,754,755,756,757,758,768,784,797,800,806,807
Repeated 211 time
Molarity: 11.90M
Forward: APAF1-3
Reverse: APAF1-4
Exon
Length: 536
Transcript: APAF1.dAug05
Exon
Length: 179
Transcript: APAF1.dAug05
Exon
Length: 157
Transcript: APAF1.dAug05
Exon
Length: 198
Transcript: APAF1.dAug05
Exon
Length: 184
Transcript: APAF1.dAug05
Exon
Length: 113
Transcript: APAF1.dAug05
Exon
Length: 132
Transcript: APAF1.dAug05
Exon
Length: 239
Transcript: APAF1.dAug05
Exon
Length: 168
Transcript: APAF1.dAug05
Exon
Length: 132
Transcript: APAF1.dAug05
Exon
Length: 114
Transcript: APAF1.dAug05
Exon
Length: 185
Transcript: APAF1.dAug05
Exon
Length: 127
Transcript: APAF1.dAug05
Exon
Length: 126
Transcript: APAF1.dAug05
Exon
Length: 132
Transcript: APAF1.dAug05
Exon
Length: 126
Transcript: APAF1.dAug05
Exon
Length: 162
Transcript: APAF1.dAug05
Exon
Length: 126
Transcript: APAF1.dAug05
Exon
Length: 120
Transcript: APAF1.dAug05
Exon
Length: 117
Transcript: APAF1.dAug05
Exon
Length: 126
Transcript: APAF1.dAug05
Exon
Length: 120
Transcript: APAF1.dAug05
Exon
Length: 126
Transcript: APAF1.dAug05
Exon
Length: 126
Transcript: APAF1.dAug05
Exon
Length: 144
Transcript: APAF1.dAug05
Exon
Length: 3013
Transcript: APAF1.dAug05
Intron
Length: 2483
Transcript: APAF1.dAug05
Intron
Length: 128
Transcript: APAF1.dAug05
Intron
Length: 704
Transcript: APAF1.dAug05
Intron
Length: 9475
Transcript: APAF1.dAug05
Intron
Length: 3112
Transcript: APAF1.dAug05
Intron
Length: 106
Transcript: APAF1.dAug05
Intron
Length: 2746
Transcript: APAF1.dAug05
Intron
Length: 398
Transcript: APAF1.dAug05
Intron
Length: 1155
Transcript: APAF1.dAug05
Intron
Length: 3328
Transcript: APAF1.dAug05
Intron
Length: 448
Transcript: APAF1.dAug05
Intron
Length: 5705
Transcript: APAF1.dAug05
Intron
Length: 2725
Transcript: APAF1.dAug05
Intron
Length: 2740
Transcript: APAF1.dAug05
Intron
Length: 3473
Transcript: APAF1.dAug05
Intron
Length: 12534
Transcript: APAF1.dAug05
Intron
Length: 6915
Transcript: APAF1.dAug05
Intron
Length: 1974
Transcript: APAF1.dAug05
Intron
Length: 3614
Transcript: APAF1.dAug05
Intron
Length: 2991
Transcript: APAF1.dAug05
Intron
Length: 7640
Transcript: APAF1.dAug05
Intron
Length: 326
Transcript: APAF1.dAug05
Intron
Length: 1650
Transcript: APAF1.dAug05
Intron
Length: 1632
Transcript: APAF1.dAug05
Intron
Length: 5103
Transcript: APAF1.dAug05
Reaction
Expected peak: 138
Associated peak: 143,144,145,146,147,148,149,150
Repeated 138 time
Molarity: 22.50M
Forward: APAF1.F8
Reverse: APAF1.R8
Reaction
Expected peak: 768
Associated peak: 696,700,708,709,710,711,716,717,718,719,720,721,723,724,725,726,727,728,729,731,732,733,734,735,736,739,740,741,742,743,744,745,747,748,749,750,751,754,755,756,757,758,768,784,797,800,806,807
Repeated 211 time
Molarity: 11.90M
Forward: APAF1-3
Reverse: APAF1-4
Exon
Length: 138
Transcript: APAF1.eAug05
Exon
Length: 190
Transcript: APAF1.eAug05
Exon
Length: 198
Transcript: APAF1.eAug05
Exon
Length: 184
Transcript: APAF1.eAug05
Exon
Length: 113
Transcript: APAF1.eAug05
Exon
Length: 132
Transcript: APAF1.eAug05
Exon
Length: 239
Transcript: APAF1.eAug05
Exon
Length: 168
Transcript: APAF1.eAug05
Exon
Length: 132
Transcript: APAF1.eAug05
Exon
Length: 114
Transcript: APAF1.eAug05
Exon
Length: 185
Transcript: APAF1.eAug05
Exon
Length: 127
Transcript: APAF1.eAug05
Exon
Length: 126
Transcript: APAF1.eAug05
Exon
Length: 132
Transcript: APAF1.eAug05
Exon
Length: 126
Transcript: APAF1.eAug05
Exon
Length: 162
Transcript: APAF1.eAug05
Exon
Length: 126
Transcript: APAF1.eAug05
Exon
Length: 120
Transcript: APAF1.eAug05
Exon
Length: 117
Transcript: APAF1.eAug05
Exon
Length: 126
Transcript: APAF1.eAug05
Exon
Length: 120
Transcript: APAF1.eAug05
Exon
Length: 126
Transcript: APAF1.eAug05
Exon
Length: 144
Transcript: APAF1.eAug05
Exon
Length: 147
Transcript: APAF1.eAug05
Intron
Length: 128
Transcript: APAF1.eAug05
Intron
Length: 671
Transcript: APAF1.eAug05
Intron
Length: 9475
Transcript: APAF1.eAug05
Intron
Length: 3112
Transcript: APAF1.eAug05
Intron
Length: 106
Transcript: APAF1.eAug05
Intron
Length: 2746
Transcript: APAF1.eAug05
Intron
Length: 398
Transcript: APAF1.eAug05
Intron
Length: 1155
Transcript: APAF1.eAug05
Intron
Length: 3328
Transcript: APAF1.eAug05
Intron
Length: 448
Transcript: APAF1.eAug05
Intron
Length: 5705
Transcript: APAF1.eAug05
Intron
Length: 2725
Transcript: APAF1.eAug05
Intron
Length: 2740
Transcript: APAF1.eAug05
Intron
Length: 3473
Transcript: APAF1.eAug05
Intron
Length: 12534
Transcript: APAF1.eAug05
Intron
Length: 6915
Transcript: APAF1.eAug05
Intron
Length: 1974
Transcript: APAF1.eAug05
Intron
Length: 3614
Transcript: APAF1.eAug05
Intron
Length: 2991
Transcript: APAF1.eAug05
Intron
Length: 7640
Transcript: APAF1.eAug05
Intron
Length: 326
Transcript: APAF1.eAug05
Intron
Length: 3408
Transcript: APAF1.eAug05
Intron
Length: 5103
Transcript: APAF1.eAug05
Reaction
Expected peak: 138
Associated peak: 143,144,145,146,147,148,149,150
Repeated 138 time
Molarity: 22.50M
Forward: APAF1.F8
Reverse: APAF1.R8
Reaction
Expected peak: 768
Associated peak: 696,700,708,709,710,711,716,717,718,719,720,721,723,724,725,726,727,728,729,731,732,733,734,735,736,739,740,741,742,743,744,745,747,748,749,750,751,754,755,756,757,758,768,784,797,800,806,807
Repeated 211 time
Molarity: 11.90M
Forward: APAF1-3
Reverse: APAF1-4
Exon
Length: 677
Transcript: APAF1.fAug05
Exon
Length: 179
Transcript: APAF1.fAug05
Exon
Length: 190
Transcript: APAF1.fAug05
Exon
Length: 198
Transcript: APAF1.fAug05
Exon
Length: 184
Transcript: APAF1.fAug05
Exon
Length: 113
Transcript: APAF1.fAug05
Exon
Length: 132
Transcript: APAF1.fAug05
Exon
Length: 3013
Transcript: APAF1.fAug05
Intron
Length: 2483
Transcript: APAF1.fAug05
Intron
Length: 128
Transcript: APAF1.fAug05
Intron
Length: 671
Transcript: APAF1.fAug05
Intron
Length: 9475
Transcript: APAF1.fAug05
Intron
Length: 3112
Transcript: APAF1.fAug05
Intron
Length: 106
Transcript: APAF1.fAug05
Intron
Length: 69613
Transcript: APAF1.fAug05
Exon
Length: 44
Transcript: APAF1.gAug05
Exon
Length: 126
Transcript: APAF1.gAug05
Exon
Length: 126
Transcript: APAF1.gAug05
Exon
Length: 19
Transcript: APAF1.gAug05
Exon
Length: 38
Transcript: APAF1.gAug05
Exon
Length: 499
Transcript: APAF1.gAug05
Intron
Length: 326
Transcript: APAF1.gAug05
Intron
Length: 1650
Transcript: APAF1.gAug05
Intron
Length: 1632
Transcript: APAF1.gAug05
Intron
Length: 87
Transcript: APAF1.gAug05
Intron
Length: 5103
Transcript: APAF1.gAug05
Exon
Length: 226
Transcript: APAF1.hAug05
Exon
Length: 464
Transcript: APAF1.hAug05
Intron
Length: 448
Transcript: APAF1.hAug05
Exon
Length: 100
Transcript: APAF1.iAug05
Exon
Length: 443
Transcript: APAF1.iAug05
Intron
Length: 3614
Transcript: APAF1.iAug05
Exon
Length: 406
Transcript: APAF1.shed1.aAug05
Exon
Length: 639
Transcript: APAF1.shed2.aAug05
Exon
Length: 682
Transcript: APAF1.shed3.aAug05
Exon
Length: 653
Transcript: APAF1.shed4.aAug05
APAF1-4
GAAAGTACTGTACCCTGGTG
APAF1.R8
CATCACACCATGAACCCAAC
APAF1-3
GGACCCTCAAGAGGATATG
APAF1.F8
GTGAAGTGTTGTTCGTGGTCTG
Gene primer pair list : Primer pairs
Forward Reverse Occurences View
APAF1-3 APAF1-4 211 View
APAF1.F8 APAF1.R8 138 View

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