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Multiple and specific mRNA processing targets for the major human hnRNP proteins
Multiple and Specific mRNA Processing Targets for the Major Human hnRNP Proteins
Transcript map
: BCL2L1
Exon
Length: 265
Transcript: BCL2L1.aAug05
Length: 265
Transcript: BCL2L1.aAug05
Exon
Length: 676
Transcript: BCL2L1.aAug05
Length: 676
Transcript: BCL2L1.aAug05
Exon
Length: 332
Transcript: BCL2L1.aAug05
Length: 332
Transcript: BCL2L1.aAug05
Intron
Length: 1404
Transcript: BCL2L1.aAug05
Length: 1404
Transcript: BCL2L1.aAug05
Intron
Length: 55568
Transcript: BCL2L1.aAug05
Length: 55568
Transcript: BCL2L1.aAug05
Reaction
Expected peak: 456
Associated peak: 451,456,457,460,461,465,466,467,468,469,470,471,472,473,474,475,476,477,478,479,481,482
Repeated 211 time
Molarity: 47.32M
Forward: BCLX-3
Reverse: BCLX-2
Expected peak: 456
Associated peak: 451,456,457,460,461,465,466,467,468,469,470,471,472,473,474,475,476,477,478,479,481,482
Repeated 211 time
Molarity: 47.32M
Forward: BCLX-3
Reverse: BCLX-2
Exon
Length: 89
Transcript: BCL2L1.bAug05
Length: 89
Transcript: BCL2L1.bAug05
Exon
Length: 676
Transcript: BCL2L1.bAug05
Length: 676
Transcript: BCL2L1.bAug05
Exon
Length: 332
Transcript: BCL2L1.bAug05
Length: 332
Transcript: BCL2L1.bAug05
Exon
Length: 73
Transcript: BCL2L1.bAug05
Length: 73
Transcript: BCL2L1.bAug05
Intron
Length: 1533
Transcript: BCL2L1.bAug05
Length: 1533
Transcript: BCL2L1.bAug05
Intron
Length: 55568
Transcript: BCL2L1.bAug05
Length: 55568
Transcript: BCL2L1.bAug05
Intron
Length: 1222
Transcript: BCL2L1.bAug05
Length: 1222
Transcript: BCL2L1.bAug05
Reaction
Expected peak: 456
Associated peak: 451,456,457,460,461,465,466,467,468,469,470,471,472,473,474,475,476,477,478,479,481,482
Repeated 211 time
Molarity: 47.32M
Forward: BCLX-3
Reverse: BCLX-2
Expected peak: 456
Associated peak: 451,456,457,460,461,465,466,467,468,469,470,471,472,473,474,475,476,477,478,479,481,482
Repeated 211 time
Molarity: 47.32M
Forward: BCLX-3
Reverse: BCLX-2
Exon
Length: 482
Transcript: BCL2L1.cAug05
Length: 482
Transcript: BCL2L1.cAug05
Exon
Length: 676
Transcript: BCL2L1.cAug05
Length: 676
Transcript: BCL2L1.cAug05
Exon
Length: 1627
Transcript: BCL2L1.cAug05
Length: 1627
Transcript: BCL2L1.cAug05
Intron
Length: 287
Transcript: BCL2L1.cAug05
Length: 287
Transcript: BCL2L1.cAug05
Intron
Length: 55568
Transcript: BCL2L1.cAug05
Length: 55568
Transcript: BCL2L1.cAug05
Reaction
Expected peak: 152
Associated peak: 158,159,160,161,162,163,176,177
Repeated 138 time
Molarity: 32.77M
Forward: BCL2L1.u.f.5
Reverse: BCL2L1.u.r.5
Expected peak: 152
Associated peak: 158,159,160,161,162,163,176,177
Repeated 138 time
Molarity: 32.77M
Forward: BCL2L1.u.f.5
Reverse: BCL2L1.u.r.5
Reaction
Expected peak: 456
Associated peak: 451,456,457,460,461,465,466,467,468,469,470,471,472,473,474,475,476,477,478,479,481,482
Repeated 211 time
Molarity: 47.32M
Forward: BCLX-3
Reverse: BCLX-2
Expected peak: 456
Associated peak: 451,456,457,460,461,465,466,467,468,469,470,471,472,473,474,475,476,477,478,479,481,482
Repeated 211 time
Molarity: 47.32M
Forward: BCLX-3
Reverse: BCLX-2
Exon
Length: 281
Transcript: BCL2L1.dAug05
Length: 281
Transcript: BCL2L1.dAug05
Exon
Length: 694
Transcript: BCL2L1.dAug05
Length: 694
Transcript: BCL2L1.dAug05
Exon
Length: 1638
Transcript: BCL2L1.dAug05
Length: 1638
Transcript: BCL2L1.dAug05
Intron
Length: 269
Transcript: BCL2L1.dAug05
Length: 269
Transcript: BCL2L1.dAug05
Intron
Length: 55568
Transcript: BCL2L1.dAug05
Length: 55568
Transcript: BCL2L1.dAug05
Reaction
Expected peak: 170
Associated peak: 176,177,178,179,180,181,185,186,187
Repeated 138 time
Molarity: 30.15M
Forward: BCL2L1.u.f.5
Reverse: BCL2L1.u.r.5
Expected peak: 170
Associated peak: 176,177,178,179,180,181,185,186,187
Repeated 138 time
Molarity: 30.15M
Forward: BCL2L1.u.f.5
Reverse: BCL2L1.u.r.5
Reaction
Expected peak: 456
Associated peak: 451,456,457,460,461,465,466,467,468,469,470,471,472,473,474,475,476,477,478,479,481,482
Repeated 211 time
Molarity: 47.32M
Forward: BCLX-3
Reverse: BCLX-2
Expected peak: 456
Associated peak: 451,456,457,460,461,465,466,467,468,469,470,471,472,473,474,475,476,477,478,479,481,482
Repeated 211 time
Molarity: 47.32M
Forward: BCLX-3
Reverse: BCLX-2
Exon
Length: 220
Transcript: BCL2L1.eAug05
Length: 220
Transcript: BCL2L1.eAug05
Exon
Length: 694
Transcript: BCL2L1.eAug05
Length: 694
Transcript: BCL2L1.eAug05
Exon
Length: 157
Transcript: BCL2L1.eAug05
Length: 157
Transcript: BCL2L1.eAug05
Exon
Length: 712
Transcript: BCL2L1.eAug05
Length: 712
Transcript: BCL2L1.eAug05
Intron
Length: 1386
Transcript: BCL2L1.eAug05
Length: 1386
Transcript: BCL2L1.eAug05
Intron
Length: 54507
Transcript: BCL2L1.eAug05
Length: 54507
Transcript: BCL2L1.eAug05
Intron
Length: 904
Transcript: BCL2L1.eAug05
Length: 904
Transcript: BCL2L1.eAug05
Reaction
Expected peak: 613
Associated peak: 576,581,595,598,600,602,604,606,607,608,609,611,615,617,619,620,621,624,625,627,629,633,634,636,637,638,641,642,643,646,648,650,651,654,656,657,658,661,663,664,668,669,672,673
Repeated 211 time
Molarity: 0.53M
Forward: BCLX-3
Reverse: BCLX-2
Expected peak: 613
Associated peak: 576,581,595,598,600,602,604,606,607,608,609,611,615,617,619,620,621,624,625,627,629,633,634,636,637,638,641,642,643,646,648,650,651,654,656,657,658,661,663,664,668,669,672,673
Repeated 211 time
Molarity: 0.53M
Forward: BCLX-3
Reverse: BCLX-2
Exon
Length: 88
Transcript: BCL2L1.fAug05
Length: 88
Transcript: BCL2L1.fAug05
Exon
Length: 694
Transcript: BCL2L1.fAug05
Length: 694
Transcript: BCL2L1.fAug05
Intron
Length: 1515
Transcript: BCL2L1.fAug05
Length: 1515
Transcript: BCL2L1.fAug05
Exon
Length: 120
Transcript: BCL2L1.gAug05
Length: 120
Transcript: BCL2L1.gAug05
Exon
Length: 676
Transcript: BCL2L1.gAug05
Length: 676
Transcript: BCL2L1.gAug05
Intron
Length: 86
Transcript: BCL2L1.gAug05
Length: 86
Transcript: BCL2L1.gAug05
Reaction
Expected peak: 353
Associated peak: None
Repeated 138 time
Molarity: 0.00M
Forward: BCL2L1.u.f.5
Reverse: BCL2L1.u.r.5
Expected peak: 353
Associated peak: None
Repeated 138 time
Molarity: 0.00M
Forward: BCL2L1.u.f.5
Reverse: BCL2L1.u.r.5
Exon
Length: 1026
Transcript: BCL2L1.hAug05
Length: 1026
Transcript: BCL2L1.hAug05
Exon
Length: 505
Transcript: BCL2L1.hAug05
Length: 505
Transcript: BCL2L1.hAug05
Exon
Length: 1627
Transcript: BCL2L1.hAug05
Length: 1627
Transcript: BCL2L1.hAug05
Intron
Length: 269
Transcript: BCL2L1.hAug05
Length: 269
Transcript: BCL2L1.hAug05
Intron
Length: 55757
Transcript: BCL2L1.hAug05
Length: 55757
Transcript: BCL2L1.hAug05
Reaction
Expected peak: 170
Associated peak: 176,177,178,179,180,181,185,186,187
Repeated 138 time
Molarity: 30.15M
Forward: BCL2L1.u.f.5
Reverse: BCL2L1.u.r.5
Expected peak: 170
Associated peak: 176,177,178,179,180,181,185,186,187
Repeated 138 time
Molarity: 30.15M
Forward: BCL2L1.u.f.5
Reverse: BCL2L1.u.r.5
Reaction
Expected peak: 267
Associated peak: 266,270,271,272,273,274,275,276,277,278,279
Repeated 211 time
Molarity: 14.55M
Forward: BCLX-3
Reverse: BCLX-2
Expected peak: 267
Associated peak: 266,270,271,272,273,274,275,276,277,278,279
Repeated 211 time
Molarity: 14.55M
Forward: BCLX-3
Reverse: BCLX-2
Exon
Length: 137
Transcript: BCL2L1.iAug05
Length: 137
Transcript: BCL2L1.iAug05
Exon
Length: 883
Transcript: BCL2L1.iAug05
Length: 883
Transcript: BCL2L1.iAug05
Intron
Length: 53596
Transcript: BCL2L1.iAug05
Length: 53596
Transcript: BCL2L1.iAug05
Exon
Length: 105
Transcript: BCL2L1.jAug05
Length: 105
Transcript: BCL2L1.jAug05
Exon
Length: 276
Transcript: BCL2L1.jAug05
Length: 276
Transcript: BCL2L1.jAug05
Intron
Length: 95
Transcript: BCL2L1.jAug05
Length: 95
Transcript: BCL2L1.jAug05
Reaction
Expected peak: 344
Associated peak: None
Repeated 138 time
Molarity: 0.00M
Forward: BCL2L1.u.f.5
Reverse: BCL2L1.u.r.5
Expected peak: 344
Associated peak: None
Repeated 138 time
Molarity: 0.00M
Forward: BCL2L1.u.f.5
Reverse: BCL2L1.u.r.5
Exon
Length: 387
Transcript: BCL2L1.shed1.aAug05
Length: 387
Transcript: BCL2L1.shed1.aAug05
Exon
Length: 1205
Transcript: BCL2L1.shed2.aAug05
Length: 1205
Transcript: BCL2L1.shed2.aAug05
Reaction
Expected peak: 439
Associated peak: 454
Repeated 138 time
Molarity: 0.01M
Forward: BCL2L1.u.f.5
Reverse: BCL2L1.u.r.5
Expected peak: 439
Associated peak: 454
Repeated 138 time
Molarity: 0.01M
Forward: BCL2L1.u.f.5
Reverse: BCL2L1.u.r.5
BCL2L1.u.f.5
TCCTCTCCCGACCTGTGATA
TCCTCTCCCGACCTGTGATA
BCL2L1.u.r.5
CCAAAACACCTGCTCACTCA
CCAAAACACCTGCTCACTCA
BCLX-3
ATGGCAGCAGTAAAGCAAGCG
ATGGCAGCAGTAAAGCAAGCG
BCLX-2
TCATTTCCGACTGAAGAGTGA
TCATTTCCGACTGAAGAGTGA