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PRPF mutations are associated with generalized defects in spliceosome formation and pre-mRNA splicing in patients with retinitis pigmentosa
PRPF8 knockdown in human cell lines Tanackovic et al.
Transcript map
: BMP4 siPRPF8 global_2|MCF7 (2007-07-13 96hrs)
- BMP4.u.f.4 / BMP4.u.r.5 (CM014229 E12) : Curve | Curve set
- BMP4.u.f.4 / BMP4.u.r.5 (CM014229 E12) : Curve | Curve set
- BMP4.u.f.4 / BMP4.u.r.5 (CM014229 F11) : Curve | Curve set
- BMP4.u.f.4 / BMP4.u.r.5 (CM014229 F11) : Curve | Curve set
- BMP4.u.f.4 / BMP4.u.r.5 (CM014229 F12) : Curve | Curve set
- BMP4.u.f.4 / BMP4.u.r.5 (CM014229 F12) : Curve | Curve set
Exon
Length: 136
Transcript: BMP4.aAug05
Length: 136
Transcript: BMP4.aAug05
Exon
Length: 125
Transcript: BMP4.aAug05
Length: 125
Transcript: BMP4.aAug05
Exon
Length: 377
Transcript: BMP4.aAug05
Length: 377
Transcript: BMP4.aAug05
Exon
Length: 1153
Transcript: BMP4.aAug05
Length: 1153
Transcript: BMP4.aAug05
Intron
Length: 3358
Transcript: BMP4.aAug05
Length: 3358
Transcript: BMP4.aAug05
Intron
Length: 1046
Transcript: BMP4.aAug05
Length: 1046
Transcript: BMP4.aAug05
Intron
Length: 964
Transcript: BMP4.aAug05
Length: 964
Transcript: BMP4.aAug05
Reaction
Expected peak: 128
21.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 128
21.7M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 128
21.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 128
21.7M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 128
21.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 128
21.7M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 128
21.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 128
21.7M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 128
14.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 128
14.7M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 128
14.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 128
14.7M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 128
14.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 128
14.7M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 128
14.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 128
14.7M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 128
20.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 128
20.7M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 128
20.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 128
20.7M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 128
20.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 128
20.7M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 128
20.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 128
20.7M
BMP4.u.f.4
BMP4.u.r.5
Exon
Length: 345
Transcript: BMP4.bAug05
Length: 345
Transcript: BMP4.bAug05
Exon
Length: 125
Transcript: BMP4.bAug05
Length: 125
Transcript: BMP4.bAug05
Exon
Length: 377
Transcript: BMP4.bAug05
Length: 377
Transcript: BMP4.bAug05
Exon
Length: 1150
Transcript: BMP4.bAug05
Length: 1150
Transcript: BMP4.bAug05
Intron
Length: 3149
Transcript: BMP4.bAug05
Length: 3149
Transcript: BMP4.bAug05
Intron
Length: 1046
Transcript: BMP4.bAug05
Length: 1046
Transcript: BMP4.bAug05
Intron
Length: 964
Transcript: BMP4.bAug05
Length: 964
Transcript: BMP4.bAug05
Reaction
Expected peak: 337
3.6M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 337
3.6M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 337
3.6M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 337
3.6M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 337
3.6M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 337
3.6M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 337
3.6M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 337
3.6M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 337
3.2M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 337
3.2M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 337
3.2M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 337
3.2M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 337
3.2M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 337
3.2M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 337
3.2M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 337
3.2M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 337
9.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 337
9.7M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 337
9.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 337
9.7M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 337
9.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 337
9.7M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 337
9.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 337
9.7M
BMP4.u.f.4
BMP4.u.r.5
Exon
Length: 184
Transcript: BMP4.cAug05
Length: 184
Transcript: BMP4.cAug05
Exon
Length: 377
Transcript: BMP4.cAug05
Length: 377
Transcript: BMP4.cAug05
Exon
Length: 1151
Transcript: BMP4.cAug05
Length: 1151
Transcript: BMP4.cAug05
Intron
Length: 1046
Transcript: BMP4.cAug05
Length: 1046
Transcript: BMP4.cAug05
Intron
Length: 964
Transcript: BMP4.cAug05
Length: 964
Transcript: BMP4.cAug05
Exon
Length: 60
Transcript: BMP4.dAug05
Length: 60
Transcript: BMP4.dAug05
Exon
Length: 125
Transcript: BMP4.dAug05
Length: 125
Transcript: BMP4.dAug05
Exon
Length: 324
Transcript: BMP4.dAug05
Length: 324
Transcript: BMP4.dAug05
Exon
Length: 634
Transcript: BMP4.dAug05
Length: 634
Transcript: BMP4.dAug05
Intron
Length: 3358
Transcript: BMP4.dAug05
Length: 3358
Transcript: BMP4.dAug05
Intron
Length: 1099
Transcript: BMP4.dAug05
Length: 1099
Transcript: BMP4.dAug05
Intron
Length: 964
Transcript: BMP4.dAug05
Length: 964
Transcript: BMP4.dAug05
Reaction
Expected peak: 128
21.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 128
21.7M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 128
21.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 128
21.7M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 128
21.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 128
21.7M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 128
21.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 128
21.7M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 128
14.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 128
14.7M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 128
14.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 128
14.7M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 128
14.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 128
14.7M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 128
14.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 128
14.7M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 128
20.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 128
20.7M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 128
20.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 128
20.7M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 128
20.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 128
20.7M
BMP4.u.f.4
BMP4.u.r.5
Reaction
Expected peak: 128
20.7M
BMP4.u.f.4
BMP4.u.r.5
Expected peak: 128
20.7M
BMP4.u.f.4
BMP4.u.r.5
Exon
Length: 154
Transcript: BMP4.eAug05
Length: 154
Transcript: BMP4.eAug05
Exon
Length: 324
Transcript: BMP4.eAug05
Length: 324
Transcript: BMP4.eAug05
Exon
Length: 281
Transcript: BMP4.eAug05
Length: 281
Transcript: BMP4.eAug05
Intron
Length: 1099
Transcript: BMP4.eAug05
Length: 1099
Transcript: BMP4.eAug05
Intron
Length: 964
Transcript: BMP4.eAug05
Length: 964
Transcript: BMP4.eAug05
Exon
Length: 42
Transcript: BMP4.fAug05
Length: 42
Transcript: BMP4.fAug05
Exon
Length: 125
Transcript: BMP4.fAug05
Length: 125
Transcript: BMP4.fAug05
Exon
Length: 377
Transcript: BMP4.fAug05
Length: 377
Transcript: BMP4.fAug05
Exon
Length: 154
Transcript: BMP4.fAug05
Length: 154
Transcript: BMP4.fAug05
Intron
Length: 5319
Transcript: BMP4.fAug05
Length: 5319
Transcript: BMP4.fAug05
Intron
Length: 1046
Transcript: BMP4.fAug05
Length: 1046
Transcript: BMP4.fAug05
Intron
Length: 964
Transcript: BMP4.fAug05
Length: 964
Transcript: BMP4.fAug05
Exon
Length: 99
Transcript: BMP4.gAug05
Length: 99
Transcript: BMP4.gAug05
Exon
Length: 1306
Transcript: BMP4.gAug05
Length: 1306
Transcript: BMP4.gAug05
Exon
Length: 80
Transcript: BMP4.gAug05
Length: 80
Transcript: BMP4.gAug05
Intron
Length: 578
Transcript: BMP4.gAug05
Length: 578
Transcript: BMP4.gAug05
Intron
Length: 34
Transcript: BMP4.gAug05
Length: 34
Transcript: BMP4.gAug05
Exon
Length: 457
Transcript: BMP4.shed1.aAug05
Length: 457
Transcript: BMP4.shed1.aAug05
Exon
Length: 990
Transcript: BMP4.shed2.aAug05
Length: 990
Transcript: BMP4.shed2.aAug05
Exon
Length: 584
Transcript: BMP4.shed3.aAug05
Length: 584
Transcript: BMP4.shed3.aAug05
BMP4.u.f.4
CGAGAAGGCAGAGGAGGAG
CGAGAAGGCAGAGGAGGAG
BMP4.u.r.5
CAAACTTGCTGGAAAGGCTC
CAAACTTGCTGGAAAGGCTC