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Home Public data LGFUS Public Data PRPF mutations are associated with generalized defects in spliceosome formation and pre-mRNA splicing in patients with retinitis pigmentosa PRPF8 knockdown in human cell lines Tanackovic et al. permalink
PRPF8 knockdown in human cell lines Tanackovic et al. ⚙
Transcript map : AXIN1 siPRPF8 global_2|MCF7 (2007-07-13 96hrs)
Exon
Length: 291
Transcript: AXIN1.aAug05
Exon
Length: 959
Transcript: AXIN1.aAug05
Exon
Length: 141
Transcript: AXIN1.aAug05
Exon
Length: 97
Transcript: AXIN1.aAug05
Exon
Length: 138
Transcript: AXIN1.aAug05
Exon
Length: 530
Transcript: AXIN1.aAug05
Exon
Length: 171
Transcript: AXIN1.aAug05
Exon
Length: 231
Transcript: AXIN1.aAug05
Exon
Length: 108
Transcript: AXIN1.aAug05
Exon
Length: 168
Transcript: AXIN1.aAug05
Exon
Length: 809
Transcript: AXIN1.aAug05
Intron
Length: 5262
Transcript: AXIN1.aAug05
Intron
Length: 31464
Transcript: AXIN1.aAug05
Intron
Length: 4473
Transcript: AXIN1.aAug05
Intron
Length: 5531
Transcript: AXIN1.aAug05
Intron
Length: 6052
Transcript: AXIN1.aAug05
Intron
Length: 495
Transcript: AXIN1.aAug05
Intron
Length: 3337
Transcript: AXIN1.aAug05
Intron
Length: 2190
Transcript: AXIN1.aAug05
Intron
Length: 1582
Transcript: AXIN1.aAug05
Intron
Length: 1191
Transcript: AXIN1.aAug05
Reaction
Expected peak: 420
1.1M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 420
1.1M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 420
1.1M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 420
1.1M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 420
0.3M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 420
0.3M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 420
0.3M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 420
0.3M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 420
4.4M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 420
4.4M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 420
4.4M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 420
4.4M
AXIN1.u.f.11
AXIN1.R5
Exon
Length: 96
Transcript: AXIN1.bAug05
Exon
Length: 959
Transcript: AXIN1.bAug05
Exon
Length: 141
Transcript: AXIN1.bAug05
Exon
Length: 97
Transcript: AXIN1.bAug05
Exon
Length: 138
Transcript: AXIN1.bAug05
Exon
Length: 530
Transcript: AXIN1.bAug05
Exon
Length: 171
Transcript: AXIN1.bAug05
Exon
Length: 231
Transcript: AXIN1.bAug05
Exon
Length: 168
Transcript: AXIN1.bAug05
Exon
Length: 809
Transcript: AXIN1.bAug05
Intron
Length: 5262
Transcript: AXIN1.bAug05
Intron
Length: 31464
Transcript: AXIN1.bAug05
Intron
Length: 4473
Transcript: AXIN1.bAug05
Intron
Length: 5531
Transcript: AXIN1.bAug05
Intron
Length: 6052
Transcript: AXIN1.bAug05
Intron
Length: 495
Transcript: AXIN1.bAug05
Intron
Length: 3337
Transcript: AXIN1.bAug05
Intron
Length: 3880
Transcript: AXIN1.bAug05
Intron
Length: 1191
Transcript: AXIN1.bAug05
Reaction
Expected peak: 312
16.6M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 312
16.6M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 312
16.6M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 312
16.6M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 312
12.1M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 312
12.1M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 312
12.1M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 312
12.1M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 312
17.1M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 312
17.1M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 312
17.1M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 312
17.1M
AXIN1.u.f.11
AXIN1.R5
Exon
Length: 945
Transcript: AXIN1.cAug05
Exon
Length: 141
Transcript: AXIN1.cAug05
Exon
Length: 97
Transcript: AXIN1.cAug05
Exon
Length: 138
Transcript: AXIN1.cAug05
Exon
Length: 530
Transcript: AXIN1.cAug05
Exon
Length: 171
Transcript: AXIN1.cAug05
Exon
Length: 4279
Transcript: AXIN1.cAug05
Exon
Length: 809
Transcript: AXIN1.cAug05
Intron
Length: 31464
Transcript: AXIN1.cAug05
Intron
Length: 4473
Transcript: AXIN1.cAug05
Intron
Length: 5531
Transcript: AXIN1.cAug05
Intron
Length: 6052
Transcript: AXIN1.cAug05
Intron
Length: 495
Transcript: AXIN1.cAug05
Intron
Length: 3337
Transcript: AXIN1.cAug05
Intron
Length: 1191
Transcript: AXIN1.cAug05
Reaction
Expected peak: 4192
0M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 4192
0M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 4192
0M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 4192
0M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 4192
0M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 4192
0M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 4192
0M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 4192
0M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 4192
0M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 4192
0M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 4192
0M
AXIN1.u.f.11
AXIN1.R5
Reaction
Expected peak: 4192
0M
AXIN1.u.f.11
AXIN1.R5
Exon
Length: 78
Transcript: AXIN1.dAug05
Exon
Length: 141
Transcript: AXIN1.dAug05
Exon
Length: 97
Transcript: AXIN1.dAug05
Exon
Length: 138
Transcript: AXIN1.dAug05
Exon
Length: 325
Transcript: AXIN1.dAug05
Intron
Length: 37685
Transcript: AXIN1.dAug05
Intron
Length: 4473
Transcript: AXIN1.dAug05
Intron
Length: 5531
Transcript: AXIN1.dAug05
Intron
Length: 6052
Transcript: AXIN1.dAug05
Exon
Length: 49
Transcript: AXIN1.eAug05
Exon
Length: 168
Transcript: AXIN1.eAug05
Exon
Length: 117
Transcript: AXIN1.eAug05
Intron
Length: 3880
Transcript: AXIN1.eAug05
Intron
Length: 1133
Transcript: AXIN1.eAug05
Exon
Length: 352
Transcript: AXIN1.shed1.aAug05
Exon
Length: 201
Transcript: AXIN1.shed2.aAug05
AXIN1.u.f.11
CATGCAGTGGATCATTGAGG
AXIN1.R5
ACCTTCCTCTGCGATCTTGTC

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