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PRPF mutations are associated with generalized defects in spliceosome formation and pre-mRNA splicing in patients with retinitis pigmentosa
PRPF8 knockdown in human cell lines Tanackovic et al.
Transcript map
: AXL siPRPF8 global_2|MCF7 (2007-07-13 96hrs)
- AXL_x151_x133_f / AXL_x151_x133_r (CM014100 A10) : Curve | Curve set
- AXL_x151_x133_f / AXL_x151_x133_r (CM014100 B9) : Curve | Curve set
- AXL_x151_x133_f / AXL_x151_x133_r (CM014100 B10) : Curve | Curve set
Exon
Length: 520
Transcript: AXL.aAug05
Length: 520
Transcript: AXL.aAug05
Exon
Length: 223
Transcript: AXL.aAug05
Length: 223
Transcript: AXL.aAug05
Exon
Length: 101
Transcript: AXL.aAug05
Length: 101
Transcript: AXL.aAug05
Exon
Length: 177
Transcript: AXL.aAug05
Length: 177
Transcript: AXL.aAug05
Exon
Length: 81
Transcript: AXL.aAug05
Length: 81
Transcript: AXL.aAug05
Exon
Length: 116
Transcript: AXL.aAug05
Length: 116
Transcript: AXL.aAug05
Exon
Length: 211
Transcript: AXL.aAug05
Length: 211
Transcript: AXL.aAug05
Exon
Length: 140
Transcript: AXL.aAug05
Length: 140
Transcript: AXL.aAug05
Exon
Length: 151
Transcript: AXL.aAug05
Length: 151
Transcript: AXL.aAug05
Exon
Length: 27
Transcript: AXL.aAug05
Length: 27
Transcript: AXL.aAug05
Exon
Length: 133
Transcript: AXL.aAug05
Length: 133
Transcript: AXL.aAug05
Exon
Length: 92
Transcript: AXL.aAug05
Length: 92
Transcript: AXL.aAug05
Exon
Length: 96
Transcript: AXL.aAug05
Length: 96
Transcript: AXL.aAug05
Exon
Length: 78
Transcript: AXL.aAug05
Length: 78
Transcript: AXL.aAug05
Exon
Length: 93
Transcript: AXL.aAug05
Length: 93
Transcript: AXL.aAug05
Exon
Length: 122
Transcript: AXL.aAug05
Length: 122
Transcript: AXL.aAug05
Exon
Length: 110
Transcript: AXL.aAug05
Length: 110
Transcript: AXL.aAug05
Exon
Length: 160
Transcript: AXL.aAug05
Length: 160
Transcript: AXL.aAug05
Exon
Length: 137
Transcript: AXL.aAug05
Length: 137
Transcript: AXL.aAug05
Exon
Length: 2215
Transcript: AXL.aAug05
Length: 2215
Transcript: AXL.aAug05
Intron
Length: 1158
Transcript: AXL.aAug05
Length: 1158
Transcript: AXL.aAug05
Intron
Length: 287
Transcript: AXL.aAug05
Length: 287
Transcript: AXL.aAug05
Intron
Length: 633
Transcript: AXL.aAug05
Length: 633
Transcript: AXL.aAug05
Intron
Length: 8910
Transcript: AXL.aAug05
Length: 8910
Transcript: AXL.aAug05
Intron
Length: 135
Transcript: AXL.aAug05
Length: 135
Transcript: AXL.aAug05
Intron
Length: 6645
Transcript: AXL.aAug05
Length: 6645
Transcript: AXL.aAug05
Intron
Length: 315
Transcript: AXL.aAug05
Length: 315
Transcript: AXL.aAug05
Intron
Length: 554
Transcript: AXL.aAug05
Length: 554
Transcript: AXL.aAug05
Intron
Length: 379
Transcript: AXL.aAug05
Length: 379
Transcript: AXL.aAug05
Intron
Length: 3162
Transcript: AXL.aAug05
Length: 3162
Transcript: AXL.aAug05
Intron
Length: 600
Transcript: AXL.aAug05
Length: 600
Transcript: AXL.aAug05
Intron
Length: 4806
Transcript: AXL.aAug05
Length: 4806
Transcript: AXL.aAug05
Intron
Length: 133
Transcript: AXL.aAug05
Length: 133
Transcript: AXL.aAug05
Intron
Length: 3530
Transcript: AXL.aAug05
Length: 3530
Transcript: AXL.aAug05
Intron
Length: 402
Transcript: AXL.aAug05
Length: 402
Transcript: AXL.aAug05
Intron
Length: 631
Transcript: AXL.aAug05
Length: 631
Transcript: AXL.aAug05
Intron
Length: 2743
Transcript: AXL.aAug05
Length: 2743
Transcript: AXL.aAug05
Intron
Length: 881
Transcript: AXL.aAug05
Length: 881
Transcript: AXL.aAug05
Intron
Length: 1923
Transcript: AXL.aAug05
Length: 1923
Transcript: AXL.aAug05
Reaction
Expected peak: 205
13.7M
AXL_x151_x133_f
AXL_x151_x133_r
Expected peak: 205
13.7M
AXL_x151_x133_f
AXL_x151_x133_r
Reaction
Expected peak: 205
2.2M
AXL_x151_x133_f
AXL_x151_x133_r
Expected peak: 205
2.2M
AXL_x151_x133_f
AXL_x151_x133_r
Reaction
Expected peak: 205
3.2M
AXL_x151_x133_f
AXL_x151_x133_r
Expected peak: 205
3.2M
AXL_x151_x133_f
AXL_x151_x133_r
Exon
Length: 250
Transcript: AXL.bAug05
Length: 250
Transcript: AXL.bAug05
Exon
Length: 223
Transcript: AXL.bAug05
Length: 223
Transcript: AXL.bAug05
Exon
Length: 101
Transcript: AXL.bAug05
Length: 101
Transcript: AXL.bAug05
Exon
Length: 177
Transcript: AXL.bAug05
Length: 177
Transcript: AXL.bAug05
Exon
Length: 81
Transcript: AXL.bAug05
Length: 81
Transcript: AXL.bAug05
Exon
Length: 116
Transcript: AXL.bAug05
Length: 116
Transcript: AXL.bAug05
Exon
Length: 211
Transcript: AXL.bAug05
Length: 211
Transcript: AXL.bAug05
Exon
Length: 140
Transcript: AXL.bAug05
Length: 140
Transcript: AXL.bAug05
Exon
Length: 151
Transcript: AXL.bAug05
Length: 151
Transcript: AXL.bAug05
Exon
Length: 27
Transcript: AXL.bAug05
Length: 27
Transcript: AXL.bAug05
Exon
Length: 133
Transcript: AXL.bAug05
Length: 133
Transcript: AXL.bAug05
Exon
Length: 92
Transcript: AXL.bAug05
Length: 92
Transcript: AXL.bAug05
Exon
Length: 96
Transcript: AXL.bAug05
Length: 96
Transcript: AXL.bAug05
Exon
Length: 78
Transcript: AXL.bAug05
Length: 78
Transcript: AXL.bAug05
Exon
Length: 93
Transcript: AXL.bAug05
Length: 93
Transcript: AXL.bAug05
Exon
Length: 122
Transcript: AXL.bAug05
Length: 122
Transcript: AXL.bAug05
Exon
Length: 110
Transcript: AXL.bAug05
Length: 110
Transcript: AXL.bAug05
Exon
Length: 160
Transcript: AXL.bAug05
Length: 160
Transcript: AXL.bAug05
Exon
Length: 137
Transcript: AXL.bAug05
Length: 137
Transcript: AXL.bAug05
Exon
Length: 732
Transcript: AXL.bAug05
Length: 732
Transcript: AXL.bAug05
Exon
Length: 775
Transcript: AXL.bAug05
Length: 775
Transcript: AXL.bAug05
Intron
Length: 1158
Transcript: AXL.bAug05
Length: 1158
Transcript: AXL.bAug05
Intron
Length: 287
Transcript: AXL.bAug05
Length: 287
Transcript: AXL.bAug05
Intron
Length: 633
Transcript: AXL.bAug05
Length: 633
Transcript: AXL.bAug05
Intron
Length: 8910
Transcript: AXL.bAug05
Length: 8910
Transcript: AXL.bAug05
Intron
Length: 135
Transcript: AXL.bAug05
Length: 135
Transcript: AXL.bAug05
Intron
Length: 6645
Transcript: AXL.bAug05
Length: 6645
Transcript: AXL.bAug05
Intron
Length: 315
Transcript: AXL.bAug05
Length: 315
Transcript: AXL.bAug05
Intron
Length: 554
Transcript: AXL.bAug05
Length: 554
Transcript: AXL.bAug05
Intron
Length: 379
Transcript: AXL.bAug05
Length: 379
Transcript: AXL.bAug05
Intron
Length: 3162
Transcript: AXL.bAug05
Length: 3162
Transcript: AXL.bAug05
Intron
Length: 600
Transcript: AXL.bAug05
Length: 600
Transcript: AXL.bAug05
Intron
Length: 4806
Transcript: AXL.bAug05
Length: 4806
Transcript: AXL.bAug05
Intron
Length: 133
Transcript: AXL.bAug05
Length: 133
Transcript: AXL.bAug05
Intron
Length: 3530
Transcript: AXL.bAug05
Length: 3530
Transcript: AXL.bAug05
Intron
Length: 402
Transcript: AXL.bAug05
Length: 402
Transcript: AXL.bAug05
Intron
Length: 631
Transcript: AXL.bAug05
Length: 631
Transcript: AXL.bAug05
Intron
Length: 2743
Transcript: AXL.bAug05
Length: 2743
Transcript: AXL.bAug05
Intron
Length: 881
Transcript: AXL.bAug05
Length: 881
Transcript: AXL.bAug05
Intron
Length: 1923
Transcript: AXL.bAug05
Length: 1923
Transcript: AXL.bAug05
Intron
Length: 544
Transcript: AXL.bAug05
Length: 544
Transcript: AXL.bAug05
Reaction
Expected peak: 205
13.7M
AXL_x151_x133_f
AXL_x151_x133_r
Expected peak: 205
13.7M
AXL_x151_x133_f
AXL_x151_x133_r
Reaction
Expected peak: 205
2.2M
AXL_x151_x133_f
AXL_x151_x133_r
Expected peak: 205
2.2M
AXL_x151_x133_f
AXL_x151_x133_r
Reaction
Expected peak: 205
3.2M
AXL_x151_x133_f
AXL_x151_x133_r
Expected peak: 205
3.2M
AXL_x151_x133_f
AXL_x151_x133_r
Exon
Length: 234
Transcript: AXL.cAug05
Length: 234
Transcript: AXL.cAug05
Exon
Length: 223
Transcript: AXL.cAug05
Length: 223
Transcript: AXL.cAug05
Exon
Length: 101
Transcript: AXL.cAug05
Length: 101
Transcript: AXL.cAug05
Exon
Length: 177
Transcript: AXL.cAug05
Length: 177
Transcript: AXL.cAug05
Exon
Length: 81
Transcript: AXL.cAug05
Length: 81
Transcript: AXL.cAug05
Exon
Length: 116
Transcript: AXL.cAug05
Length: 116
Transcript: AXL.cAug05
Exon
Length: 211
Transcript: AXL.cAug05
Length: 211
Transcript: AXL.cAug05
Exon
Length: 140
Transcript: AXL.cAug05
Length: 140
Transcript: AXL.cAug05
Exon
Length: 151
Transcript: AXL.cAug05
Length: 151
Transcript: AXL.cAug05
Exon
Length: 133
Transcript: AXL.cAug05
Length: 133
Transcript: AXL.cAug05
Exon
Length: 92
Transcript: AXL.cAug05
Length: 92
Transcript: AXL.cAug05
Exon
Length: 96
Transcript: AXL.cAug05
Length: 96
Transcript: AXL.cAug05
Exon
Length: 78
Transcript: AXL.cAug05
Length: 78
Transcript: AXL.cAug05
Exon
Length: 93
Transcript: AXL.cAug05
Length: 93
Transcript: AXL.cAug05
Exon
Length: 122
Transcript: AXL.cAug05
Length: 122
Transcript: AXL.cAug05
Exon
Length: 110
Transcript: AXL.cAug05
Length: 110
Transcript: AXL.cAug05
Exon
Length: 160
Transcript: AXL.cAug05
Length: 160
Transcript: AXL.cAug05
Exon
Length: 137
Transcript: AXL.cAug05
Length: 137
Transcript: AXL.cAug05
Exon
Length: 742
Transcript: AXL.cAug05
Length: 742
Transcript: AXL.cAug05
Intron
Length: 1158
Transcript: AXL.cAug05
Length: 1158
Transcript: AXL.cAug05
Intron
Length: 287
Transcript: AXL.cAug05
Length: 287
Transcript: AXL.cAug05
Intron
Length: 633
Transcript: AXL.cAug05
Length: 633
Transcript: AXL.cAug05
Intron
Length: 8910
Transcript: AXL.cAug05
Length: 8910
Transcript: AXL.cAug05
Intron
Length: 135
Transcript: AXL.cAug05
Length: 135
Transcript: AXL.cAug05
Intron
Length: 6645
Transcript: AXL.cAug05
Length: 6645
Transcript: AXL.cAug05
Intron
Length: 315
Transcript: AXL.cAug05
Length: 315
Transcript: AXL.cAug05
Intron
Length: 554
Transcript: AXL.cAug05
Length: 554
Transcript: AXL.cAug05
Intron
Length: 3568
Transcript: AXL.cAug05
Length: 3568
Transcript: AXL.cAug05
Intron
Length: 600
Transcript: AXL.cAug05
Length: 600
Transcript: AXL.cAug05
Intron
Length: 4806
Transcript: AXL.cAug05
Length: 4806
Transcript: AXL.cAug05
Intron
Length: 133
Transcript: AXL.cAug05
Length: 133
Transcript: AXL.cAug05
Intron
Length: 3530
Transcript: AXL.cAug05
Length: 3530
Transcript: AXL.cAug05
Intron
Length: 402
Transcript: AXL.cAug05
Length: 402
Transcript: AXL.cAug05
Intron
Length: 631
Transcript: AXL.cAug05
Length: 631
Transcript: AXL.cAug05
Intron
Length: 2743
Transcript: AXL.cAug05
Length: 2743
Transcript: AXL.cAug05
Intron
Length: 881
Transcript: AXL.cAug05
Length: 881
Transcript: AXL.cAug05
Intron
Length: 1923
Transcript: AXL.cAug05
Length: 1923
Transcript: AXL.cAug05
Reaction
Expected peak: 178
5.7M
AXL_x151_x133_f
AXL_x151_x133_r
Expected peak: 178
5.7M
AXL_x151_x133_f
AXL_x151_x133_r
Reaction
Expected peak: 178
0M
AXL_x151_x133_f
AXL_x151_x133_r
Expected peak: 178
0M
AXL_x151_x133_f
AXL_x151_x133_r
Reaction
Expected peak: 178
1.6M
AXL_x151_x133_f
AXL_x151_x133_r
Expected peak: 178
1.6M
AXL_x151_x133_f
AXL_x151_x133_r
Exon
Length: 332
Transcript: AXL.shed1.aAug05
Length: 332
Transcript: AXL.shed1.aAug05
Exon
Length: 407
Transcript: AXL.shed2.aAug05
Length: 407
Transcript: AXL.shed2.aAug05
AXL_x151_x133_r
AGAGCCAAGATGAGGACACA
AGAGCCAAGATGAGGACACA
AXL_x151_x133_f
ATCTGACAGTGTGTGTGGCA
ATCTGACAGTGTGTGTGGCA