Back to Rnomics Platform
 Open Session
×
1 warning:
  • Access restricted to public data.
    Please sign in at Rnomics Platform to access your data.
Navigation
Home permalink
Sequences

Sequence ADAM9.eAug05

AAGCCAAGGCTGCCCCCAAAGATTGTTTCATTGAAGTGAATTCTAAAGGTGACAGATTTGGCAATTGTGGTTTCTCTGGCAATGAATACAAGAAGTGTGC
CACTGGGAATGCTTTGTGTGGAAAGCTTCAGTGTGAGAATGTACAAGAGATACCTGTATTTGGAATTGTGCCTGCTATTATTCAAACGCCTAGTCGAGGC
ACCAAATGTTGGGGTGTGGATTTCCAGCTAGGATCAGATGTTCCAGATCCTGGGATGGTTAACGAAGGCACAAAATGTGGTGCTGGAAAGATCTGTAGAA
ACTTCCAGTGTGTAGATGCTTCTGTTCTGAATTATGACTGTGATGTTCAGAAAAAGTGTCATGGACATGGGGTAGGTAATGTTTTCTTTTGAAATGAATA
CTGCATTGAGGGACGGACTTCTGGTCTTCTTCTTCCTAATTGTTCCCCTTATTGTCTGTGCTATTTTTATCTTCATCAAGAGGGATCAACTGTGGAGAAG
CTACTTCAGAAAGAAGAGATCACAAACATATGAGTCAGATGGCAAAAATCAAGCAAACCCTTCTAGACAGCCGGGGAGTGTTCCTCGACATGTTTCTCCA
GTGACACCTCCCAGAGAAGTTCCTATATATGCAAACAGATTTGCAGTACCAACCTATGCAGCCAAGCAACCTCAGCAGTTCCCATCA
  • ADAM9.F3 (forward primer)
  • ADAM9.R3 (reverse primer)
  • Exon skipping and alternative donor or acceptor

Frame 0

KPRLPPKIVSLK*ILKVTDLAIVVSLAMNTRSV
PLGMLCVESFSVRMYKRYLYLELCLLLFKRLVEA
PNVGVWISS*DQMFQILGWLTKAQNVVLERSVE
TSSV*MLLF*IMTVMFRKSVMDMG*VMFSFEMN
TALRDGLLVFFFLIVPLIVCAIFIFIKRDQLWRS
YFRKKRSQTYESDGKNQANPSRQPGSVPRHVSP
VTPPREVPIYANRFAVPTYAAKQPQQFPS

Frame 1

SQGCPQRLFH*SEF*R*QIWQLWFLWQ*IQEVC
HWECFVWKASV*ECTRDTCIWNCACYYSNA*SR
HQMLGCGFPARIRCSRSWDG*RRHKMWCWKDL*K
LPVCRCFCSEL*L*CSEKVSWTWGR*CFLLK*I
LH*GTDFWSSSS*LFPLLSVLFLSSSRGINCGE
ATSERRDHKHMSQMAKIKQTLLDSRGVFLDMFLQ
*HLPEKFLYMQTDLQYQPMQPSNLSSSH

Frame 2

AKAAPKDCFIEVNSKGDRFGNCGFSGNEYKKCA
TGNALCGKLQCENVQEIPVFGIVPAIIQTPSRG
TKCWGVDFQLGSDVPDPGMVNEGTKCGAGKICR
NFQCVDASVLNYDCDVQKKCHGHGVGNVFF*NEY
CIEGRTSGLLLPNCSPYCLCYFYLHQEGSTVEK
LLQKEEITNI*VRWQKSSKPF*TAGECSSTCFS
SDTSQRSSYICKQICSTNLCSQATSAVPI

Sequence ADAM9.aAug05

TAGGCGATGTCGGGAGCGAGCTCGGACCGAGGGCTCAGTTGCGTCAGTGCCGCGCGCGTGCTCGTCGGGCGCGCGTGCTCGTCGGGCGCGCGCGCTTCCC
GGCCAGACTTGGGGCCCCGGCAGGGTTGGAAAATGATGGAAGAGGCGGAGGTGGAGGCGACCGAGTGCTGAGAGGAACCTGCGGAATCGGCCGAGATGGG
GTCTGGCGCGCGCTTTCCCTCGGGGACCCTTCGTGTCCGGTGGTTGCTGTTGCTTGGCCTGGTGGGCCCAGTCCTCGGTGCGGCGCGGCCAGGCTTTCAA
CAGACCTCACATCTTTCTTCTTATGAAATTATAACTCCTTGGAGATTAACTAGAGAAAGAAGAGAAGCCCCTAGGCCCTATTCAAAACAAGTATCTTATG
TTATTCAGGCTGAAGGAAAAGAGCATATTATTCACTTGGAAAGGAACAAAGACCTTTTGCCTGAAGATTTTGTGGTTTATACTTACAACAAGGAAGGGAC
TTTAATCACTGACCATCCCAATATACAGAATCATTGTCATTATCGGGGCTATGTGGAGGGAGTTCATAATTCATCCATTGCTCTTAGCGACTGTTTTGGA
CTCAGAGGATTGCTGCATTTAGAGAATGCGAGTTATGGGATTGAACCCCTGCAGAACAGCTCTCATTTTGAGCACATCATTTATCGAATGGATGATGTCT
ACAAAGAGCCTCTGAAATGTGGAGTTTCCAACAAGGATATAGAGAAAGAAACTGCAAAGGATGAAGAGGAAGAGCCTCCCAGCATGACTCAGCTACTTCG
AAGAAGAAGAGCTGTCTTGCCACAGACCCGGTATGTGGAGCTGTTCATTGTCGTAGACAAGGAAAGGTATGACATGATGGGAAGAAATCAGACTGCTGTG
AGAGAAGAGATGATTCTCCTGGCAAACTACTTGGATAGTATGTATATTATGTTAAATATTCGAATTGTGCTAGTTGGACTGGAGATTTGGACCAATGGAA
ACCTGATCAACATAGTTGGGGGTGCTGGTGATGTGCTGGGGAACTTCGTGCAGTGGCGGGAAAAGTTTCTTATCACACGTCGGAGACATGACAGTGCACA
GCTAGTTCTAAAGAAAGGTTTTGGTGGAACTGCAGGAATGGCATTTGTGGGAACAGTGTGTTCAAGGAGCCACGCAGGCGGGATTAATGTGTTTGGACAA
ATCACTGTGGAGACATTTGCTTCCATTGTTGCTCATGAATTGGGTCATAATCTTGGAATGAATCACGATGATGGGAGAGATTGTTCCTGTGGAGCAAAGA
GCTGCATCATGAATTCAGGAGCATCGGGTTCCAGAAACTTTAGCAGTTGCAGTGCAGAGGACTTTGAGAAGTTAACTTTAAATAAAGGAGGAAACTGCCT
TCTTAATATTCCAAAGCCTGATGAAGCCTATAGTGCTCCCTCCTGTGGTAATAAGTTGGTGGACGCTGGGGAAGAGTGTGACTGTGGTACTCCAAAGGAA
TGTGAATTGGACCCTTGCTGCGAAGGAAGTACCTGTAAGCTTAAATCATTTGCTGAGTGTGCATATGGTGACTGTTGTAAAGACTGTCGGTTCCTTCCAG
GAGGTACTTTATGCCGAGGAAAAACCAGTGAGTGTGATGTTCCAGAGTACTGCAATGGTTCTTCTCAGTTCTGTCAGCCAGATGTTTTTATTCAGAATGG
ATATCCTTGCCAGAATAACAAAGCCTATTGCTACAACGGCATGTGCCAGTATTATGATGCTCAATGTCAAGTCATCTTTGGCTCAAAAGCCAAGGCTGCC
CCCAAAGATTGTTTCATTGAAGTGAATTCTAAAGGTGACAGATTTGGCAATTGTGGTTTCTCTGGCAATGAATACAAGAAGTGTGCCACTGGGAATGCTT
TGTGTGGAAAGCTTCAGTGTGAGAATGTACAAGAGATACCTGTATTTGGAATTGTGCCTGCTATTATTCAAACGCCTAGTCGAGGCACCAAATGTTGGGG
TGTGGATTTCCAGCTAGGATCAGATGTTCCAGATCCTGGGATGGTTAACGAAGGCACAAAATGTGGTGCTGGAAAGATCTGTAGAAACTTCCAGTGTGTA
GATGCTTCTGTTCTGAATTATGACTGTGATGTTCAGAAAAAGTGTCATGGACATGGGGTATGTAATAGCAATAAGAATTGTCACTGTGAAAATGGCTGGG
CTCCCCCAAATTGTGAGACTAAAGGATACGGAGGAAGTGTGGACAGTGGACCTACATACAATGAAATGAATACTGCATTGAGGGACGGACTTCTGGTCTT
CTTCTTCCTAATTGTTCCCCTTATTGTCTGTGCTATTTTTATCTTCATCAAGAGGGATCAACTGTGGAGAAGCTACTTCAGAAAGAAGAGATCACAAACA
TATGAGTCAGATGGCAAAAATCAAGCAAACCCTTCTAGACAGCCGGGGAGTGTTCCTCGACATGTTTCTCCAGTGACACCTCCCAGAGAAGTTCCTATAT
ATGCAAACAGATTTGCAGTACCAACCTATGCAGCCAAGCAACCTCAGCAGTTCCCATCAAGGCCACCTCCACCACAACCGAAAGTATCATCTCAGGGAAA
CTTAATTCCTGCCCGTCCTGCTCCTGCACCTCCTTTATATAGTTCCCTCACTTGATTTTTTTAACCTTCTTTTTGCAAATGTCTTCAGGGAACTGAGCTA
ATACTTTTTTTTTTTCTTGATGTTTTCTTGAAAAGCCTTTCTGTTGCAACTATGAATGAAAACAAAACACCACAAAACAGACTTCACTAACACAGAAAAA
CAGAAACTGAGTGTGAGAGTTGTGAAATACAAGGAAATGCAGTAAAGCCAGGGAATTTACAATAACATTTCCGTTTCCATCATTGAATAAGTCTTATTCA
GTCATCGGTGAGGTTAATGCACTAATCATGGATTTTTTGAACATGTTATTGCAGTGATTCTCAAATTAACTGTATTGGTGTAAGAGTTTTGTCATTAAGT
GTTTAAGTGTTATTCTGAATTTTCTACCTTAGTTATCATTAATGTAGTTCCTCATTGAACATGTGATAATCTAATACCTGTGAAAACTGACTAATCAGCT
GCCAATAATATCTAATATTTTTCATCATGCACGAATTAATAATCATCATACTCTAGAATCTTGTCTGTCACTCACTACATGAATAAGCAAATATTGTCTT
CAAAAGAATGCACAAGAACCACAATTAAGATGTCATATTATTTTGAAAGTACAAAATATACTAAAAGAGTGTGTGTGTATTCACGCAGTTACTCGCTTCC
ATTTTTATGACCTTTCAACTATAGGTAATAACTCTTAGAGAAATTAATTTAATATTAGAATTTCTATTATGAATCATGTGAAAGCATGACATTCGTTCAC
AATAGCACTATTTTAAATAAATTATAAGCTTTAAGGTACGAAGTATTTAATAGATCTAATCAAATATGTTGATTCATGGCTATAATAAAGCAGGAGCAAT
TATAAAATCTTCAATCAATTGAACTTTTACAAAACCACTTGAGAATTTCATGAGCACTTTAAAATCTGAACTTTCAAAGCTTGCTATTAAATCATTTAGA
ATGTTTACATTTACTAAGGTGTGCTGGGTCATGTAAAATATTAGACACTAATATTTTCATAGAAATTAGGCTGGAGAAAGAAGGAAGAAATGGTTTTCTT
AAATACCTACAAAAAAGTTACTGTGGTATCTATGAGTTATCATCTTAGCTGTGTTAAAAATGAATTTTTACTATGGCAGATATGGTATGGATCGTAAAAT
TTTAAGCACTAAAAATTTTTTCATAACCTTTCATAATAAAGTTTAATAATAGGTTTATTAACTGAATTTCATTAGTTTTTTAAAAGTGTTTTTGGTTTGT
GTATATATACATATACAAATACAACATTTACAATAAATAAAATACTTGAAATTCTCTTTTGTGTCTCCTAGTAGCTTCCTACTCAACTATTTATAATCTC
ATTAATTAAAAAGTTATAATTTTAGATAAAAATTCTAGTCAAATTTTTACAGATATTATCTCACTAATTTTCAGACTTTTGCCAAAGTGTGCACAATGGC
TTTTTGTTAATAAAGAACAGATTAGTTTTGAAGAAGGCAAAAATTTCAGTTTTCTGAAGACAGCATGTTATTTTAACAATCAAGTATACATATTAAAAAT
TGTGAGCAATCTCAAATGAAGGTCCATCGTTTCATTTTAAATCTCTAAATGAATTCATATAAGACTCAAACGTTTGTGCTGTTCACTCATGTAGCCTCAG
TTTTTGCAATTGTGATGCATATCACTGAAATTTTACAGTTGGTAATGTATTAACTATGTAACTTAACACTTGGAATTAAATAGTTCTTTGGATATTTGAC
TAGTTAAGTTTTTAAAAAGACTATTGGATCTGAACTTCTTTTATATATTTTTTAATATGCTTTATGTTTTTTACTTACTTGGTCATGGATGCCACTTCAA
AATTTGAAAATATTAAAGGACATCCTTTCTTTCTTCAAAAAGAATAAATAAGGGT
  • ADAM9.F3 (forward primer)
  • ADAM9.R3 (reverse primer)
  • Exon skipping and alternative donor or acceptor

Frame 0

*AMSGASSDRGLSCVSAARVLVGRACSSGARAS
RPDLGPRQGWKMMEEAEVEATEC*EEPAESAEMG
SGARFPSGTLRVRWLLLLGLVGPVLGAARPGFQ
QTSHLSSYEIITPWRLTRERREAPRPYSKQVSY
VIQAEGKEHIIHLERNKDLLPEDFVVYTYNKEGT
LITDHPNIQNHCHYRGYVEGVHNSSIALSDCFG
LRGLLHLENASYGIEPLQNSSHFEHIIYRMDDV
YKEPLKCGVSNKDIEKETAKDEEEEPPSMTQLLR
RRRAVLPQTRYVELFIVVDKERYDMMGRNQTAV
REEMILLANYLDSMYIMLNIRIVLVGLEIWTNG
NLINIVGGAGDVLGNFVQWREKFLITRRRHDSAQ
LVLKKGFGGTAGMAFVGTVCSRSHAGGINVFGQ
ITVETFASIVAHELGHNLGMNHDDGRDCSCGAK
SCIMNSGASGSRNFSSCSAEDFEKLTLNKGGNCL
LNIPKPDEAYSAPSCGNKLVDAGEECDCGTPKE
CELDPCCEGSTCKLKSFAECAYGDCCKDCRFLP
GGTLCRGKTSECDVPEYCNGSSQFCQPDVFIQNG
YPCQNNKAYCYNGMCQYYDAQCQVIFGSKAKAA
PKDCFIEVNSKGDRFGNCGFSGNEYKKCATGNA
LCGKLQCENVQEIPVFGIVPAIIQTPSRGTKCWG
VDFQLGSDVPDPGMVNEGTKCGAGKICRNFQCV
DASVLNYDCDVQKKCHGHGVCNSNKNCHCENGW
APPNCETKGYGGSVDSGPTYNEMNTALRDGLLVF
FFLIVPLIVCAIFIFIKRDQLWRSYFRKKRSQT
YESDGKNQANPSRQPGSVPRHVSPVTPPREVPI
YANRFAVPTYAAKQPQQFPSRPPPPQPKVSSQGN
LIPARPAPAPPLYSSLT*FF*PSFCKCLQGTEL
ILFFFLDVFLKSLSVATMNENKTPQNRLH*HRK
TETECESCEIQGNAVKPGNLQ*HFRFHH*ISLIQ
SSVRLMH*SWIF*TCYCSDSQINCIGVRVLSLS
V*VLF*IFYLSYH*CSSSLNM**SNTCEN*LIS
CQ*YLIFFIMHELIIIIL*NLVCHSLHE*ANIVF
KRMHKNHN*DVILF*KYKIY*KSVCVFTQLLAS
IFMTFQL*VITLREINLILEFLL*IM*KHDIRS
Q*HYFK*IISFKVRSI**I*SNMLIHGYNKAGAI
IKSSIN*TFTKPLENFMSTLKSELSKLAIKSFR
MFTFTKVCWVM*NIRH*YFHRN*AGERRKKWFS
*IPTKKLLWYL*VIILAVLKMNFYYGRYGMDRKI
LSTKNFFITFHNKV***VY*LNFISFLKVFLVC
VYIHIQIQHLQ*IKYLKFSFVSPSSFLLNYL*S
H*LKSYNFR*KF*SNFYRYYLTNFQTFAKVCTMA
FC**RTD*F*RRQKFQFSEDSMLF*QSSIHIKN
CEQSQMKVHRFILNL*MNSYKTQTFVLFTHVAS
VFAIVMHITEILQLVMY*LCNLTLGIK*FFGYLT
S*VFKKTIGSELLLYIF*YALCFLLTWSWMPLQ
NLKILKDILSFFKKNK*G

Frame 1

RRCRERARTEGSVASVPRACSSGARARRARALP
GQTWGPGRVGK*WKRRRWRRPSAERNLRNRPRW
GLARAFPRGPFVSGGCCCLAWWAQSSVRRGQAFN
RPHIFLLMKL*LLGD*LEKEEKPLGPIQNKYLM
LFRLKEKSILFTWKGTKTFCLKILWFILTTRKG
L*SLTIPIYRIIVIIGAMWREFIIHPLLLATVLD
SEDCCI*RMRVMGLNPCRTALILSTSFIEWMMS
TKSL*NVEFPTRI*RKKLQRMKRKSLPA*LSYF
EEEELSCHRPGMWSCSLS*TRKGMT*WEEIRLL*
EKR*FSWQTTWIVCILC*IFELC*LDWRFGPME
T*ST*LGVLVMCWGTSCSGGKSFLSHVGDMTVH
S*F*RKVLVELQEWHLWEQCVQGATQAGLMCLDK
SLWRHLLPLLLMNWVIILE*ITMMGEIVPVEQR
AAS*IQEHRVPETLAVAVQRTLRS*L*IKEETA
FLIFQSLMKPIVLPPVVISWWTLGKSVTVVLQRN
VNWTLAAKEVPVSLNHLLSVHMVTVVKTVGSFQ
EVLYAEEKPVSVMFQSTAMVLLSSVSQMFLFRM
DILARITKPIATTACASIMMLNVKSSLAQKPRLP
PKIVSLK*ILKVTDLAIVVSLAMNTRSVPLGML
CVESFSVRMYKRYLYLELCLLLFKRLVEAPNVG
VWISS*DQMFQILGWLTKAQNVVLERSVETSSV*
MLLF*IMTVMFRKSVMDMGYVIAIRIVTVKMAG
LPQIVRLKDTEEVWTVDLHTMK*ILH*GTDFWS
SSS*LFPLLSVLFLSSSRGINCGEATSERRDHKH
MSQMAKIKQTLLDSRGVFLDMFLQ*HLPEKFLY
MQTDLQYQPMQPSNLSSSHQGHLHHNRKYHLRE
T*FLPVLLLHLLYIVPSLDFFNLLFANVFRELS*
YFFFFLMFS*KAFLLQL*MKTKHHKTDFTNTEK
QKLSVRVVKYKEMQ*SQGIYNNISVSIIE*VLF
SHR*G*CTNHGFFEHVIAVILKLTVLV*EFCH*V
FKCYSEFSTLVIINVVPH*TCDNLIPVKTD*SA
ANNI*YFSSCTN**SSYSRILSVTHYMNKQILS
SKECTRTTIKMSYYFESTKYTKRVCVYSRSYSLP
FL*PFNYR**LLEKLI*Y*NFYYESCESMTFVH
NSTILNKL*ALRYEVFNRSNQIC*FMAIIKQEQ
L*NLQSIELLQNHLRIS*AL*NLNFQSLLLNHLE
CLHLLRCAGSCKILDTNIFIEIRLEKEGRNGFL
KYLQKSYCGIYELSS*LC*K*IFTMADMVWIVK
F*ALKIFS*PFIIKFNNRFIN*ISLVF*KCFWFV
YIYIYKYNIYNK*NT*NSLLCLLVASYSTIYNL
IN*KVIILDKNSSQIFTDIISLIFRLLPKCAQW
LFVNKEQISFEEGKNFSFLKTACYFNNQVYILKI
VSNLK*RSIVSF*ISK*IHIRLKRLCCSLM*PQ
FLQL*CISLKFYSW*CINYVT*HLELNSSLDI*
LVKFLKRLLDLNFFYIFFNMLYVFYLLGHGCHFK
I*KY*RTSFLSSKRINKG

Frame 2

GDVGSELGPRAQLRQCRARARRARVLVGRARFP
ARLGAPAGLENDGRGGGGGDRVLRGTCGIGRDG
VWRALSLGDPSCPVVAVAWPGGPSPRCGAARLS
TDLTSFFL*NYNSLEIN*RKKRSP*ALFKTSILC
YSG*RKRAYYSLGKEQRPFA*RFCGLYLQQGRD
FNH*PSQYTESLSLSGLCGGSS*FIHCS*RLFW
TQRIAAFRECELWD*TPAEQLSF*AHHLSNG*CL
QRASEMWSFQQGYRERNCKG*RGRASQHDSATS
KKKSCLATDPVCGAVHCRRQGKV*HDGKKSDCC
ERRDDSPGKLLG*YVYYVKYSNCASWTGDLDQWK
PDQHSWGCW*CAGELRAVAGKVSYHTSET*QCT
ASSKERFWWNCRNGICGNSVFKEPRRRD*CVWT
NHCGDICFHCCS*IGS*SWNESR*WERLFLWSKE
LHHEFRSIGFQKL*QLQCRGL*EVNFK*RRKLP
S*YSKA**SL*CSLLW**VGGRWGRV*LWYSKG
M*IGPLLRRKYL*A*IIC*VCIW*LL*RLSVPSR
RYFMPRKNQ*V*CSRVLQWFFSVLSARCFYSEW
ISLPE*QSLLLQRHVPVL*CSMSSHLWLKSQGC
PQRLFH*SEF*R*QIWQLWFLWQ*IQEVCHWECF
VWKASV*ECTRDTCIWNCACYYSNA*SRHQMLG
CGFPARIRCSRSWDG*RRHKMWCWKDL*KLPVC
RCFCSEL*L*CSEKVSWTWGM**Q*ELSL*KWLG
SPKL*D*RIRRKCGQWTYIQ*NEYCIEGRTSGL
LLPNCSPYCLCYFYLHQEGSTVEKLLQKEEITN
I*VRWQKSSKPF*TAGECSSTCFSSDTSQRSSYI
CKQICSTNLCSQATSAVPIKATSTTTESIISGK
LNSCPSCSCTSFI*FPHLIFLTFFLQMSSGN*A
NTFFFS*CFLEKPFCCNYE*KQNTTKQTSLTQKN
RN*V*EL*NTRKCSKAREFTITFPFPSLNKSYS
VIGEVNALIMDFLNMLLQ*FSN*LYWCKSFVIK
CLSVILNFLP*LSLM*FLIEHVII*YL*KLTNQL
PIISNIFHHARINNHHTLESCLSLTT*ISKYCL
QKNAQEPQLRCHIILKVQNILKECVCIHAVTRF
HFYDLSTIGNNS*RN*FNIRISIMNHVKA*HSFT
IALF*INYKL*GTKYLIDLIKYVDSWL**SRSN
YKIFNQLNFYKTT*EFHEHFKI*TFKACY*II*
NVYIY*GVLGHVKY*TLIFS*KLGWRKKEEMVFL
NTYKKVTVVSMSYHLSCVKNEFLLWQIWYGS*N
FKH*KFFHNLS**SLIIGLLTEFH*FFKSVFGL
CIYTYTNTTFTINKILEILFCVS**LPTQLFIIS
LIKKL*F*IKILVKFLQILSH*FSDFCQSVHNG
FLLIKNRLVLKKAKISVF*RQHVILTIKYTY*K
L*AISNEGPSFHFKSLNEFI*DSNVCAVHSCSLS
FCNCDAYH*NFTVGNVLTM*LNTWN*IVLWIFD
*LSF*KDYWI*TSFIYFLICFMFFTYLVMDATS
KFENIKGHPFFLQKE*IR

Copyright ©2008,2017, all rights reserved.