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Sequences

Sequence LTA.fAug05

CGTCAGCACCCCAAGATGCATCTTGCCCACAGCACCCTCAAACCTGCTGCTCACCTCATTGGAGACCCCAGCAAGCAGAACTCACTGCTCTGGAGAGCAA ACACGGACCGTGCCTTCCTCCAGGATGGTTTCTCCTTGAGCAACAATTCTCTCCTGGTCCCCACCAGTGGCATCTACTTCGTCTACTCCCAGGGGTCGTC ACCACCTCTCCTTTGGCCATTCCAACAGCTCAAGTCTTCCCTGATCAAGTCACCGGAGCTTTCAAAGAAGGAATTCTAGGCATCCCAGGGGACCACACCT CCCTGAACCATCCCTGATGTCTGTCTGGCTGAGGATTTCAAGCCTGCCTAGGAATTCCCAGCCCAAAGCTGTTGGTCTGTCCCACCAGCTAGGTGGGGCC TAGATCCACACACAGAGGAAGAGCAGGCACATGGAGGAGCTTGGGGGATGACTAGAGGCAGGGAGGGGACTATTTATGAAGGCAAAAAAATTAAATTATT TATTTATGGAGGATGGAGAGAGGGGAATAATAGAAGAACATCCAAGGAGAAACAGAGACAGGCCCAAGAGATGAAGAGTGAGAGGGCATGCGCACAAGGC TGACCAAGAGAGAAAGAAGTAGGCATGAGGGATCACAGGGCCCCAGAAGGCAGGGAAAGGCTCTGAAAGCCAGCTGCCGACCAGAGCCCCACACGGAGGC ATCTGCACCCTCGATGAAGCCCAATAAACCTCTTTTCTCTGA

LTA.F6 (forward primer)
LTA.R5 (reverse primer)
Intron retention

Frame 0

RQHPKMHLAHSTLKPAAHLIGDPSKQNSLLWRA NTDRAFLQDGFSLSNNSLLVPTSGIYFVYSQGSS PPLLWPFQQLKSSLIKSPELSKKEF*ASQGTTP P*TIPDVCLAEDFKPA*EFPAQSCWSVPPARWG LDPHTEEEQAHGGAWGMTRGREGTIYEGKKIKLF IYGGWREGNNRRTSKEKQRQAQEMKSERACAQG *PREKEVGMRDHRAPEGRERL*KPAADQSPTRR HLHPR*SPINLFSL

Frame 1

VSTPRCILPTAPSNLLLTSLETPASRTHCSGEQ TRTVPSSRMVSP*ATILSWSPPVASTSSTPRGR HHLSFGHSNSSSLP*SSHRSFQRRNSRHPRGPHL PEPSLMSVWLRISSLPRNSQPKAVGLSHQLGGA *IHTQRKSRHMEELGG*LEAGRGLFMKAKKLNY LFMEDGERGIIEEHPRRNRDRPKR*RVRGHAHKA DQERKK*A*GITGPQKAGKGSESQLPTRAPHGG ICTLDEAQ*TSFL*

Frame 2

SAPQDASCPQHPQTCCSPHWRPQQAELTALESK HGPCLPPGWFLLEQQFSPGPHQWHLLRLLPGVV TTSPLAIPTAQVFPDQVTGAFKEGILGIPGDHT SLNHP*CLSG*GFQACLGIPSPKLLVCPTS*VGP RSTHRGRAGTWRSLGDD*RQGGDYL*RQKN*II YLWRMERGE**KNIQGETETGPRDEE*EGMRTR LTKRERSRHEGSQGPRRQGKALKASCRPEPHTEA SAPSMKPNKPLFS

Sequence LTA.eAug05

GGCCCAGGGGCTCCGCACAGCAGGTGAGGCTCTCCTGCCCCATCTCCTTGGGCTGCCCGTGCTTCGTGCTTTGGACTACCGCCCAGCAGTGTCCTGCCCT CTGCCTGGGCCTCGGTCCCTCCTGCACCTGCTGCCTGGATCCCCGGCCTGCCTGGGCCTGGGCCTTGGTTCTCCCCATGACACCACCTGAACGTCTCTTC CTCCCAAGGGTGTGTGGCACCACCCTACACCTCCTCCTTCTGGGGCTGCTGCTGGTTCTGCTGCCTGGGGCCCAGGTGAGGCAGCAGGAGAATGGGGGCT GCTGGGGTGGCTCAGCCAAACCTTGAGCCCTAGAGCCCCCCTCAACTCTGTTCTCCCCTAGGGGCTCCCTGGTGTTGGCCTCACACCTTCAGCTGCCCAG ACTGCCCGTCAGCACCCCAAGATGCATCTTGCCCACAGCACCCTCAAACCTGCTGCTCACCTCATTGGAGACCCCAGCAAGCAGAACTCACTGCTCTGGA GAGCAAACACGGACCGTGCCTTCCTCCAGGATGGTTTCTCCTTGAGCAACAATTCTCTCCTGGTCCCCACCAGTGGCATCTACTTCGTCTACTCCCAGGT GGTCTTCTCTGGGAAAGCCTACTCTCCCAAGGCCACCTCCTCCCCACTCTACCTGGCCCATGAGGTCCAGCTCTTCTCCTCCCAGTACCCCTTCCATGTG CCTCTCCTCAGCTCCCAGAAGATGGTGTATCCAGGGCTGCAGGAACCCTGGCTGCACTCGATGTACCACGGGGCTGCGTTCCAGCTCACCCAGGGAGACC AGCTATCCACCCACACAGATGGCATCCCCCACCTAGTCCTCAGCCCTAGTACTGTCTTCTTTGGAGCCTTCGCTCTGTAGAACTTGGAAAAATCCAGAAA GAAAAAATAATTGATTTCAAGACCTTCTCCCCATTCTGCCTCCATTCTGACCATTTCAGGGGTCGTCACCACCTCTCCTTTGGCCATTCCAACAGCTCAA GTCTTCCCTGATCAAGTCACCGGAGCTTTCAAAGAAGGAATTCTAGGCATCCCAGGGGACCACACCTCCCTGAACCATCCCTGATGTCTGTCTGGCTGAG GATTTCAAGCCTGCCTAGGAATTCCCAGCCCAAAGCTGTTGGTCTGTCCCACCAGCTAGGTGGGGCCTAGATCCACACACAGAGGAAGAGCAGGCACATG GAGGAGCTTGGGGGATGACTAGAGGCAGGGAGGGGACTATTTATGAAGGCAAAAAAATTAAATTATTTATTTATGGAGGATGGAGAGAGGGGAATAATAG AAGAACATCCAAGGAGAAACAGAGACAGGCCCAAGAGATGAAGAGTGAGAGGGCATGCGCACAAGGCTGACCAAGAGAGAAAGAAGTAGGCATGAGGGAT CACAGGGCCCCAGAAGGCAGGGAAAGGCTCTGAAAGCCAGCTGCCGACCAGAGCCCCACACGGAGGCATCTGCACCCTCGATGAAGCCCAATAAACCTCT TTTCTCTGA

LTA.F6 (forward primer)
LTA.R5 (reverse primer)
Intron retention

Frame 0

GPGAPHSR*GSPAPSPWAARASCFGLPPSSVLP SAWASVPPAPAAWIPGLPGPGPWFSP*HHLNVSS SQGCVAPPYTSSFWGCCWFCCLGPR*GSRRMGA AGVAQPNLEP*SPPQLCSPLGAPWCWPHTFSCP DCPSAPQDASCPQHPQTCCSPHWRPQQAELTALE SKHGPCLPPGWFLLEQQFSPGPHQWHLLRLLPG GLLWESLLSQGHLLPTLPGP*GPALLLPVPLPC ASPQLPEDGVSRAAGTLAALDVPRGCVPAHPGRP AIHPHRWHPPPSPQP*YCLLWSLRSVELGKIQK EKIIDFKTFSPFCLHSDHFRGRHHLSFGHSNSS SLP*SSHRSFQRRNSRHPRGPHLPEPSLMSVWLR ISSLPRNSQPKAVGLSHQLGGA*IHTQRKSRHM EELGG*LEAGRGLFMKAKKLNYLFMEDGERGII EEHPRRNRDRPKR*RVRGHAHKADQERKK*A*GI TGPQKAGKGSESQLPTRAPHGGICTLDEAQ*TS FL*

Frame 1

AQGLRTAGEALLPHLLGLPVLRALDYRPAVSCP LPGPRSLLHLLPGSPACLGLGLGSPHDTT*TSL PPKGVWHHPTPPPSGAAAGSAAWGPGEAAGEWGL LGWLSQTLSPRAPLNSVLP*GLPGVGLTPSAAQ TARQHPKMHLAHSTLKPAAHLIGDPSKQNSLLW RANTDRAFLQDGFSLSNNSLLVPTSGIYFVYSQV VFSGKAYSPKATSSPLYLAHEVQLFSSQYPFHV PLLSSQKMVYPGLQEPWLHSMYHGAAFQLTQGD QLSTHTDGIPHLVLSPSTVFFGAFAL*NLEKSRK KK*LISRPSPHSASILTISGVVTTSPLAIPTAQ VFPDQVTGAFKEGILGIPGDHTSLNHP*CLSG* GFQACLGIPSPKLLVCPTS*VGPRSTHRGRAGTW RSLGDD*RQGGDYL*RQKN*IIYLWRMERGE** KNIQGETETGPRDEE*EGMRTRLTKRERSRHEG SQGPRRQGKALKASCRPEPHTEASAPSMKPNKPL FS

Frame 2

PRGSAQQVRLSCPISLGCPCFVLWTTAQQCPAL CLGLGPSCTCCLDPRPAWAWALVLPMTPPERLF LPRVCGTTLHLLLLGLLLVLLPGAQVRQQENGG CWGGSAKP*ALEPPSTLFSPRGSLVLASHLQLPR LPVSTPRCILPTAPSNLLLTSLETPASRTHCSG EQTRTVPSSRMVSP*ATILSWSPPVASTSSTPR WSSLGKPTLPRPPPPHSTWPMRSSSSPPSTPSMC LSSAPRRWCIQGCRNPGCTRCTTGLRSSSPRET SYPPTQMASPT*SSALVLSSLEPSLCRTWKNPE RKNN*FQDLLPILPPF*PFQGSSPPLLWPFQQLK SSLIKSPELSKKEF*ASQGTTPP*TIPDVCLAE DFKPA*EFPAQSCWSVPPARWGLDPHTEEEQAH GGAWGMTRGREGTIYEGKKIKLFIYGGWREGNNR RTSKEKQRQAQEMKSERACAQG*PREKEVGMRD HRAPEGRERL*KPAADQSPTRRHLHPR*SPINL FSL

Sequence LTA.cAug05

CTGTACTCAGCCAAGGGTGCAGAGATGTTATATATGATTGCTCTTCAGGGAACCGGGCCTCCAGCTCACACCCCAGCTGCTCAACCACCTCCTCTCTGAA TTGACTGTCCCTTCTTTGGAACTCTAGGCCTGACCCCACTCCCTGGCCCTCCCAGCCCACGATTCCCCTGACCCGACTCCCTTTCCCAGAACTCAGTCGC CTGAACCCCCAGCCTGTGGTTCTCTCCTAGGCCTCAGCCTTTCCTGCCTTTGACTGAAACAGCAGTATCTTCTAAGCCCTGGGGGCTTCCCCGGGCCCCA GCCCCGACCTAGAACCCGCCCGCTGCCTGCCACGCTGCCACTGCCGCTTCCTCTATAAAGGGACCTGAGCGTCCGGGCCCAGGGGCTCCGCACAGCAGGT TCTCCCCATGACACCACCTGAACGTCTCTTCCTCCCAAGGGTGTGTGGCACCACCCTACACCTCCTCCTTCTGGGGCTGCTGCTGGTTCTGCTGCCTGGG GCCCAGGTGAGGCAGCAGGAGAATGGGGGCTGCTGGGGTGGCTCAGCCAAACCTTGAGCCCTAGAGCCCCCCTCAACTCTGTTCTCCCCTAGGGGCTCCC TGGTGTTGGCCTCACACCTTCAGCTGCCCAGACTGCCCGTCAGCACCCCAAGATGCATCTTGCCCACAGCACCCTCAAACCTGCTGCTCACCTCATTGGA GACCCCAGCAAGCAGAACTCACTGCTCTGGAGAGCAAACACGGACCGTGCCTTCCTCCAGGATGGTTTCTCCTTGAGCAACAATTCTCTCCTGGTCCCCA CCAGTGGCATCTACTTCGTCTACTCCCAGGTGGTCTTCTCTGGGAAAGCCTACTCTCCCAAGGCCACCTCCTCCCCACTCTACCTGGCCCATGAGGTCCA GCTCTTCTCCTCCCAGTACCCCTTCCATGTGCCTCTCCTCAGCTCCCAGAAGATGGTGTATCCAGGGCTGCAGGAACCCTGGCTGCACTCGATGTACCAC GGGGCTGCGTTCCAGCTCACCCAGGGAGACCAGCTATCCACCCACACAGATGGCATCCCCCACCTAGTCCTCAGCCCTAGTACTGTCTTCTTTGGAGCCT TCGCTCTGTAGAACTTGGAAAAATCCAGAAAGAAAAAATAATTGATTTCAAGACCTTCTCCCCATTCTGCCTCCATTCTGACCATTTCAGGGGTCGTCAC CACCTCTCCTTTGGCCATTCCAACAGCTCAAGTCTTCCCTGATCAAGTCACCGGAGCTTTCAAAGAAGGAATTCTAGGCATCCCAGGGGACCACACCTCC CTGAACCATCCCTGATGTCTGTCTGGCTGAGGATTTCAAGCCTGCCTAGGAATTCCCAGCCCAAAGCTGTTGGTCTGTCCCACCAGCTAGGTGGGGCCTA GATCCACACACAGAGGAAGAGCAGGCACATGGAGGAGCTTGGGGGATGACTAGAGGCAGGGAGGGGACTATTTATGAAGGCAAAAAAATTAAATTATTTA TTTATGGAGGATGGAGAGAGGGGAATAATAGAAGAACATCCAAGGAGAAACAGAGACAGGCCCAAGAGATGAAGAGTGAGAGGGCATGCGCACAAGGCTG ACCAAGAGAGAAAGAAGTAGGCATGAGGGATCACAGGGCCCCAGAAGGCAGGGAAAGGCTCTGAAAGCCAGCTGCCGACCAGAGCCCCACACGGAGGCAT CTGCACCCTCGATGAAGCCCAATAAACCTCTTTTCTCTGA

LTA.F6 (forward primer)
LTA.R5 (reverse primer)
Intron retention

Frame 0

LYSAKGAEMLYMIALQGTGPPAHTPAAQPPPL* IDCPFFGTLGLTPLPGPPSPRFP*PDSLSQNSVA *TPSLWFSPRPQPFLPLTETAVSSKPWGLPRAP APT*NPPAACHAATAASSIKGPERPGPGAPHSR FSP*HHLNVSSSQGCVAPPYTSSFWGCCWFCCLG PR*GSRRMGAAGVAQPNLEP*SPPQLCSPLGAP WCWPHTFSCPDCPSAPQDASCPQHPQTCCSPHW RPQQAELTALESKHGPCLPPGWFLLEQQFSPGPH QWHLLRLLPGGLLWESLLSQGHLLPTLPGP*GP ALLLPVPLPCASPQLPEDGVSRAAGTLAALDVP RGCVPAHPGRPAIHPHRWHPPPSPQP*YCLLWSL RSVELGKIQKEKIIDFKTFSPFCLHSDHFRGRH HLSFGHSNSSSLP*SSHRSFQRRNSRHPRGPHL PEPSLMSVWLRISSLPRNSQPKAVGLSHQLGGA* IHTQRKSRHMEELGG*LEAGRGLFMKAKKLNYL FMEDGERGIIEEHPRRNRDRPKR*RVRGHAHKA DQERKK*A*GITGPQKAGKGSESQLPTRAPHGGI CTLDEAQ*TSFL*

Frame 1

CTQPRVQRCYI*LLFREPGLQLTPQLLNHLLSE LTVPSLEL*A*PHSLALPAHDSPDPTPFPRTQS PEPPACGSLLGLSLSCL*LKQQYLLSPGGFPGPQ PRPRTRPLPATLPLPLPL*RDLSVRAQGLRTAG SPHDTT*TSLPPKGVWHHPTPPPSGAAAGSAAW GPGEAAGEWGLLGWLSQTLSPRAPLNSVLP*GLP GVGLTPSAAQTARQHPKMHLAHSTLKPAAHLIG DPSKQNSLLWRANTDRAFLQDGFSLSNNSLLVP TSGIYFVYSQVVFSGKAYSPKATSSPLYLAHEVQ LFSSQYPFHVPLLSSQKMVYPGLQEPWLHSMYH GAAFQLTQGDQLSTHTDGIPHLVLSPSTVFFGA FAL*NLEKSRKKK*LISRPSPHSASILTISGVVT TSPLAIPTAQVFPDQVTGAFKEGILGIPGDHTS LNHP*CLSG*GFQACLGIPSPKLLVCPTS*VGP RSTHRGRAGTWRSLGDD*RQGGDYL*RQKN*IIY LWRMERGE**KNIQGETETGPRDEE*EGMRTRL TKRERSRHEGSQGPRRQGKALKASCRPEPHTEA SAPSMKPNKPLFS

Frame 2

VLSQGCRDVIYDCSSGNRASSSHPSCSTTSSLN *LSLLWNSRPDPTPWPSQPTIPLTRLPFPELSR LNPQPVVLS*ASAFPAFD*NSSIF*ALGASPGP SPDLEPARCLPRCHCRFLYKGT*ASGPRGSAQQV LPMTPPERLFLPRVCGTTLHLLLLGLLLVLLPG AQVRQQENGGCWGGSAKP*ALEPPSTLFSPRGS LVLASHLQLPRLPVSTPRCILPTAPSNLLLTSLE TPASRTHCSGEQTRTVPSSRMVSP*ATILSWSP PVASTSSTPRWSSLGKPTLPRPPPPHSTWPMRS SSSPPSTPSMCLSSAPRRWCIQGCRNPGCTRCTT GLRSSSPRETSYPPTQMASPT*SSALVLSSLEP SLCRTWKNPERKNN*FQDLLPILPPF*PFQGSS PPLLWPFQQLKSSLIKSPELSKKEF*ASQGTTPP *TIPDVCLAEDFKPA*EFPAQSCWSVPPARWGL DPHTEEEQAHGGAWGMTRGREGTIYEGKKIKLF IYGGWREGNNRRTSKEKQRQAQEMKSERACAQG* PREKEVGMRDHRAPEGRERL*KPAADQSPTRRH LHPR*SPINLFSL

Sequence LTA.bAug05

CTGTACTCAGCCAAGGGTGCAGAGATGTTATATATGATTGCTCTTCAGGGAACCGGGCCTCCAGCTCACACCCCAGCTGCTCAACCACCTCCTCTCTGAA TTGACTGTCCCTTCTTTGGAACTCTAGGCCTGACCCCACTCCCTGGCCCTCCCAGCCCACGATTCCCCTGACCCGACTCCCTTTCCCAGAACTCAGTCGC CTGAACCCCCAGCCTGTGGTTCTCTCCTAGGCCTCAGCCTTTCCTGCCTTTGACTGAAACAGCAGTATCTTCTAAGCCCTGGGGGCTTCCCCGGGCCCCA GCCCCGACCTAGAACCCGCCCGCTGCCTGCCACGCTGCCACTGCCGCTTCCTCTATAAAGGGACCTGAGCGTCCGGGCCCAGGGGCTCCGCACAGCAGGT TCTCCCCATGACACCACCTGAACGTCTCTTCCTCCCAAGGGTGTGTGGCACCACCCTACACCTCCTCCTTCTGGGGCTGCTGCTGGTTCTGCTGCCTGGG GCCCAGGGGCTCCCTGGTGTTGGCCTCACACCTTCAGCTGCCCAGACTGCCCGTCAGCACCCCAAGATGCATCTTGCCCACAGCACCCTCAAACCTGCTG CTCACCTCATTGGAGACCCCAGCAAGCAGAACTCACTGCTCTGGAGAGCAAACACGGACCGTGCCTTCCTCCAGGATGGTTTCTCCTTGAGCAACAATTC TCTCCTGGTCCCCACCAGTGGCATCTACTTCGTCTACTCCCAGGTGGTCTTCTCTGGGAAAGCCTACTCTCCCAAGGCCACCTCCTCCCCACTCTACCTG GCCCATGAGGTCCAGCTCTTCTCCTCCCAGTACCCCTTCCATGTGCCTCTCCTCAGCTCCCAGAAGATGGTGTATCCAGGGCTGCAGGAACCCTGGCTGC ACTCGATGTACCACGGGGCTGCGTTCCAGCTCACCCAGGGAGACCAGCTATCCACCCACACAGATGGCATCCCCCACCTAGTCCTCAGCCCTAGTACTGT CTTCTTTGGAGCCTTCGCTCTGTAGAACTTGGAAAAATCCAGAAAGAAAAAATAATTGATTTCAAGACCTTCTCCCCATTCTGCCTCCATTCTGACCATT TCAGGGGTCGTCACCACCTCTCCTTTGGCCATTCCAACAGCTCAAGTCTTCCCTGATCAAGTCACCGGAGCTTTCAAAGAAGGAATTCTAGGCATCCCAG GGGACCACACCTCCCTGAACCATCCCTGATGTCTGTCTGGCTGAGGATTTCAAGCCTGCCTAGGAATTCCCAGCCCAAAGCTGTTGGTCTGTCCCACCAG CTAGGTGGGGCCTAGATCCACACACAGAGGAAGAGCAGGCACATGGAGGAGCTTGGGGGATGACTAGAGGCAGGGAGGGGACTATTTATGAAGGCAAAAA AATTAAATTATTTATTTATGGAGGATGGAGAGAGGGGAATAATAGAAGAACATCCAAGGAGAAACAGAGACAGGCCCAAGAGATGAAGAGTGAGAGGGCA TGCGCACAAGGCTGACCAAGAGAGAAAGAAGTAGGCATGAGGGATCACAGGGCCCCAGAAGGCAGGGAAAGGCTCTGAAAGCCAGCTGCCGACCAGAGCC CCACACGGAGGCATCTGCACCCTCGATGAAGCCCAATAAACCTCTTTTCTCTGA

LTA.F6 (forward primer)
LTA.R5 (reverse primer)
Intron retention

Frame 0

LYSAKGAEMLYMIALQGTGPPAHTPAAQPPPL* IDCPFFGTLGLTPLPGPPSPRFP*PDSLSQNSVA *TPSLWFSPRPQPFLPLTETAVSSKPWGLPRAP APT*NPPAACHAATAASSIKGPERPGPGAPHSR FSP*HHLNVSSSQGCVAPPYTSSFWGCCWFCCLG PRGSLVLASHLQLPRLPVSTPRCILPTAPSNLL LTSLETPASRTHCSGEQTRTVPSSRMVSP*ATI LSWSPPVASTSSTPRWSSLGKPTLPRPPPPHSTW PMRSSSSPPSTPSMCLSSAPRRWCIQGCRNPGC TRCTTGLRSSSPRETSYPPTQMASPT*SSALVL SSLEPSLCRTWKNPERKNN*FQDLLPILPPF*PF QGSSPPLLWPFQQLKSSLIKSPELSKKEF*ASQ GTTPP*TIPDVCLAEDFKPA*EFPAQSCWSVPP ARWGLDPHTEEEQAHGGAWGMTRGREGTIYEGKK IKLFIYGGWREGNNRRTSKEKQRQAQEMKSERA CAQG*PREKEVGMRDHRAPEGRERL*KPAADQS PTRRHLHPR*SPINLFSL

Frame 1

CTQPRVQRCYI*LLFREPGLQLTPQLLNHLLSE LTVPSLEL*A*PHSLALPAHDSPDPTPFPRTQS PEPPACGSLLGLSLSCL*LKQQYLLSPGGFPGPQ PRPRTRPLPATLPLPLPL*RDLSVRAQGLRTAG SPHDTT*TSLPPKGVWHHPTPPPSGAAAGSAAW GPGAPWCWPHTFSCPDCPSAPQDASCPQHPQTCC SPHWRPQQAELTALESKHGPCLPPGWFLLEQQF SPGPHQWHLLRLLPGGLLWESLLSQGHLLPTLP GP*GPALLLPVPLPCASPQLPEDGVSRAAGTLAA LDVPRGCVPAHPGRPAIHPHRWHPPPSPQP*YC LLWSLRSVELGKIQKEKIIDFKTFSPFCLHSDH FRGRHHLSFGHSNSSSLP*SSHRSFQRRNSRHPR GPHLPEPSLMSVWLRISSLPRNSQPKAVGLSHQ LGGA*IHTQRKSRHMEELGG*LEAGRGLFMKAK KLNYLFMEDGERGIIEEHPRRNRDRPKR*RVRGH AHKADQERKK*A*GITGPQKAGKGSESQLPTRA PHGGICTLDEAQ*TSFL*

Frame 2

VLSQGCRDVIYDCSSGNRASSSHPSCSTTSSLN *LSLLWNSRPDPTPWPSQPTIPLTRLPFPELSR LNPQPVVLS*ASAFPAFD*NSSIF*ALGASPGP SPDLEPARCLPRCHCRFLYKGT*ASGPRGSAQQV LPMTPPERLFLPRVCGTTLHLLLLGLLLVLLPG AQGLPGVGLTPSAAQTARQHPKMHLAHSTLKPA AHLIGDPSKQNSLLWRANTDRAFLQDGFSLSNNS LLVPTSGIYFVYSQVVFSGKAYSPKATSSPLYL AHEVQLFSSQYPFHVPLLSSQKMVYPGLQEPWL HSMYHGAAFQLTQGDQLSTHTDGIPHLVLSPSTV FFGAFAL*NLEKSRKKK*LISRPSPHSASILTI SGVVTTSPLAIPTAQVFPDQVTGAFKEGILGIP GDHTSLNHP*CLSG*GFQACLGIPSPKLLVCPTS *VGPRSTHRGRAGTWRSLGDD*RQGGDYL*RQK N*IIYLWRMERGE**KNIQGETETGPRDEE*EG MRTRLTKRERSRHEGSQGPRRQGKALKASCRPEP HTEASAPSMKPNKPLFS

Sequence LTA.aAug05

GGCCCAGGGGCTCCGCACAGCAGGTGAGGCTCTCCTGCCCCATCTCCTTGGGCTGCCCGTGCTTCGTGCTTTGGACTACCGCCCAGCAGTGTCCTGCCCT CTGCCTGGGCCTCGGTCCCTCCTGCACCTGCTGCCTGGATCCCCGGCCTGCCTGGGCCTGGGCCTTGGTTCTCCCCATGACACCACCTGAACGTCTCTTC CTCCCAAGGGTGTGTGGCACCACCCTACACCTCCTCCTTCTGGGGCTGCTGCTGGTTCTGCTGCCTGGGGCCCAGGGGCTCCCTGGTGTTGGCCTCACAC CTTCAGCTGCCCAGACTGCCCGTCAGCACCCCAAGATGCATCTTGCCCACAGCACCCTCAAACCTGCTGCTCACCTCATTGGAGACCCCAGCAAGCAGAA CTCACTGCTCTGGAGAGCAAACACGGACCGTGCCTTCCTCCAGGATGGTTTCTCCTTGAGCAACAATTCTCTCCTGGTCCCCACCAGTGGCATCTACTTC GTCTACTCCCAGGTGGTCTTCTCTGGGAAAGCCTACTCTCCCAAGGCCACCTCCTCCCCACTCTACCTGGCCCATGAGGTCCAGCTCTTCTCCTCCCAGT ACCCCTTCCATGTGCCTCTCCTCAGCTCCCAGAAGATGGTGTATCCAGGGCTGCAGGAACCCTGGCTGCACTCGATGTACCACGGGGCTGCGTTCCAGCT CACCCAGGGAGACCAGCTATCCACCCACACAGATGGCATCCCCCACCTAGTCCTCAGCCCTAGTACTGTCTTCTTTGGAGCCTTCGCTCTGTAGAACTTG GAAAAATCCAGAAAGAAAAAATAATTGATTTCAAGACCTTCTCCCCATTCTGCCTCCATTCTGACCATTTCAGGGGTCGTCACCACCTCTCCTTTGGCCA TTCCAACAGCTCAAGTCTTCCCTGATCAAGTCACCGGAGCTTTCAAAGAAGGAATTCTAGGCATCCCAGGGGACCACACCTCCCTGAACCATCCCTGATG TCTGTCTGGCTGAGGATTTCAAGCCTGCCTAGGAATTCCCAGCCCAAAGCTGTTGGTCTGTCCCACCAGCTAGGTGGGGCCTAGATCCACACACAGAGGA AGAGCAGGCACATGGAGGAGCTTGGGGGATGACTAGAGGCAGGGAGGGGACTATTTATGAAGGCAAAAAAATTAAATTATTTATTTATGGAGGATGGAGA GAGGGGAATAATAGAAGAACATCCAAGGAGAAACAGAGACAGGCCCAAGAGATGAAGAGTGAGAGGGCATGCGCACAAGGCTGACCAAGAGAGAAAGAAG TAGGCATGAGGGATCACAGGGCCCCAGAAGGCAGGGAAAGGCTCTGAAAGCCAGCTGCCGACCAGAGCCCCACACGGAGGCATCTGCACCCTCGATGAAG CCCAATAAACCTCTTTTCTCTGA

LTA.F6 (forward primer)
LTA.R5 (reverse primer)
Intron retention

Frame 0

GPGAPHSR*GSPAPSPWAARASCFGLPPSSVLP SAWASVPPAPAAWIPGLPGPGPWFSP*HHLNVSS SQGCVAPPYTSSFWGCCWFCCLGPRGSLVLASH LQLPRLPVSTPRCILPTAPSNLLLTSLETPASR THCSGEQTRTVPSSRMVSP*ATILSWSPPVASTS STPRWSSLGKPTLPRPPPPHSTWPMRSSSSPPS TPSMCLSSAPRRWCIQGCRNPGCTRCTTGLRSS SPRETSYPPTQMASPT*SSALVLSSLEPSLCRTW KNPERKNN*FQDLLPILPPF*PFQGSSPPLLWP FQQLKSSLIKSPELSKKEF*ASQGTTPP*TIPD VCLAEDFKPA*EFPAQSCWSVPPARWGLDPHTEE EQAHGGAWGMTRGREGTIYEGKKIKLFIYGGWR EGNNRRTSKEKQRQAQEMKSERACAQG*PREKE VGMRDHRAPEGRERL*KPAADQSPTRRHLHPR*S PINLFSL

Frame 1

AQGLRTAGEALLPHLLGLPVLRALDYRPAVSCP LPGPRSLLHLLPGSPACLGLGLGSPHDTT*TSL PPKGVWHHPTPPPSGAAAGSAAWGPGAPWCWPHT FSCPDCPSAPQDASCPQHPQTCCSPHWRPQQAE LTALESKHGPCLPPGWFLLEQQFSPGPHQWHLL RLLPGGLLWESLLSQGHLLPTLPGP*GPALLLPV PLPCASPQLPEDGVSRAAGTLAALDVPRGCVPA HPGRPAIHPHRWHPPPSPQP*YCLLWSLRSVEL GKIQKEKIIDFKTFSPFCLHSDHFRGRHHLSFGH SNSSSLP*SSHRSFQRRNSRHPRGPHLPEPSLM SVWLRISSLPRNSQPKAVGLSHQLGGA*IHTQR KSRHMEELGG*LEAGRGLFMKAKKLNYLFMEDGE RGIIEEHPRRNRDRPKR*RVRGHAHKADQERKK *A*GITGPQKAGKGSESQLPTRAPHGGICTLDE AQ*TSFL*

Frame 2

PRGSAQQVRLSCPISLGCPCFVLWTTAQQCPAL CLGLGPSCTCCLDPRPAWAWALVLPMTPPERLF LPRVCGTTLHLLLLGLLLVLLPGAQGLPGVGLT PSAAQTARQHPKMHLAHSTLKPAAHLIGDPSKQN SLLWRANTDRAFLQDGFSLSNNSLLVPTSGIYF VYSQVVFSGKAYSPKATSSPLYLAHEVQLFSSQ YPFHVPLLSSQKMVYPGLQEPWLHSMYHGAAFQL TQGDQLSTHTDGIPHLVLSPSTVFFGAFAL*NL EKSRKKK*LISRPSPHSASILTISGVVTTSPLA IPTAQVFPDQVTGAFKEGILGIPGDHTSLNHP*C LSG*GFQACLGIPSPKLLVCPTS*VGPRSTHRG RAGTWRSLGDD*RQGGDYL*RQKN*IIYLWRME RGE**KNIQGETETGPRDEE*EGMRTRLTKRERS RHEGSQGPRRQGKALKASCRPEPHTEASAPSMK PNKPLFS