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Sequences

Sequence NM_033150

ACGCAGAGCGCTGCTGGGCTGCCGGGTCTCCCGCTTCCCCCTCCTGCTCCAAGGGCCTCCTGCATGAGGGCGCGGTAGAGACCCGGACCCGCGCCGTGCT
CCTGCCGTTTCGCTGCGCTCCGCCCGGGCCCGGCTCAGCCAGGCCCCGCGGTGAGCCATGATTCGCCTCGGGGCTCCCCAGACGCTGGTGCTGCTGACGC
TGCTCGTCGCCGCTGTCCTTCGGTGTCAGGGCCAGGATGTCCGGCAACCAGGACCAAAGGGACAGAAAGGAGAACCTGGAGACATCAAGGATATTGTAGG
ACCCAAAGGACCTCCTGGGCCTCAGGGACCTGCAGGGGAACAAGGACCCAGAGGGGATCGTGGTGACAAAGGTGAAAAAGGTGCCCCTGGACCTCGTGGC
AGAGATGGAGAACCTGGGACCCCTGGAAATCCTGGCCCCCCTGGTCCTCCCGGCCCCCCTGGTCCCCCTGGTCTTGGTGGAAACTTTGCTGCCCAGATGG
CTGGAGGATTTGATGAAAAGGCTGGTGGCGCCCAGTTGGGAGTAATGCAAGGACCAATGGGCCCCATGGGACCTCGAGGACCTCCAGGCCCTGCAGGTGC
TCCTGGGCCTCAAGGATTTCAAGGCAATCCTGGTGAACCTGGTGAACCTGGTGTCTCTGGTCCCATGGGTCCCCGTGGTCCTCCTGGTCCCCCTGGAAAG
CCTGGTGATGATGGTGAAGCTGGAAAACCTGGAAAAGCTGGTGAAAGGGGTCCGCCTGGTCCTCAGGGTGCTCGTGGTTTCCCAGGAACCCCAGGCCTTC
CTGGTGTCAAAGGTCACAGAGGTTATCCAGGCCTGGACGGTGCTAAGGGAGAGGCGGGTGCTCCTGGTGTGAAGGGTGAGAGTGGTTCCCCGGGTGAGAA
CGGATCTCCGGGCCCAATGGGTCCTCGTGGCCTGCCTGGTGAAAGAGGACGGACTGGCCCTGCTGGCGCTGCGGGTGCCCGAGGCAACGATGGTCAGCCA
GGCCCCGCAGGGCCTCCGGGTCCTGTCGGTCCTGCTGGTGGTCCTGGCTTCCCTGGTGCTCCTGGAGCCAAGGGTGAAGCCGGCCCCACTGGTGCCCGTG
GTCCTGAAGGTGCTCAAGGTCCTCGCGGTGAACCTGGTACTCCTGGGTCCCCTGGGCCTGCTGGTGCCTCCGGTAACCCTGGAACAGATGGAATTCCTGG
AGCCAAAGGATCTGCTGGTGCTCCTGGCATTGCTGGTGCTCCTGGCTTCCCTGGGCCACGGGGCCCTCCTGGCCCTCAAGGTGCAACTGGTCCTCTGGGC
CCGAAAGGTCAGACGGGTGAACCTGGTATTGCTGGCTTCAAAGGTGAACAAGGCCCCAAGGGAGAACCTGGCCCTGCTGGCCCCCAGGGAGCCCCTGGAC
CCGCTGGTGAAGAAGGCAAGAGAGGTGCCCGTGGAGAGCCTGGTGGCGTTGGGCCCATCGGTCCCCCTGGAGAAAGAGGTGCTCCCGGCAACCGCGGTTT
CCCAGGTCAAGATGGTCTGGCAGGTCCCAAGGGAGCCCCTGGAGAGCGAGGGCCCAGTGGTCTTGCTGGCCCCAAGGGAGCCAACGGTGACCCTGGCCGT
CCTGGAGAACCTGGCCTTCCTGGAGCCCGGGGTCTCACTGGCCGCCCTGGTGATGCTGGTCCTCAAGGCAAAGTTGGCCCTTCTGGAGCCCCTGGTGAAG
ATGGTCGTCCTGGACCTCCAGGTCCTCAGGGGGCTCGTGGGCAGCCTGGTGTCATGGGTTTCCCTGGCCCCAAAGGTGCCAACGGTGAGCCTGGCAAAGC
TGGTGAGAAGGGACTGCCTGGTGCTCCTGGTCTGAGGGGTCTTCCTGGCAAAGATGGTGAGACAGGTGCTGCAGGACCCCCTGGCCCTGCTGGACCTGCT
GGTGAACGAGGCGAGCAGGGTGCTCCTGGGCCATCTGGGTTCCAGGGACTTCCTGGCCCTCCTGGTCCCCCAGGTGAAGGTGGAAAACCAGGTGACCAGG
GTGTTCCCGGTGAAGCTGGAGCCCCTGGCCTCGTGGGTCCCAGGGGTGAACGAGGTTTCCCAGGTGAACGTGGCTCTCCCGGTGCCCAGGGCCTCCAGGG
TCCCCGTGGCCTCCCCGGCACTCCTGGCACTGATGGTCCCAAAGGTGCATCTGGCCCAGCAGGCCCCCCTGGGGCTCAGGGCCCTCCAGGTCTTCAGGGA
ATGCCTGGCGAGAGGGGAGCAGCTGGTATCGCTGGGCCCAAAGGCGACAGGGGTGACGTTGGTGAGAAAGGCCCTGAGGGAGCCCCTGGAAAGGATGGTG
GACGAGGCCTGACAGGTCCCATTGGCCCCCCTGGCCCAGCTGGTGCTAATGGCGAGAAGGGAGAAGTTGGACCTCCTGGTCCTGCAGGAAGTGCTGGTGC
TCGTGGCGCTCCGGGTGAACGTGGAGAGACTGGGCCCCCCGGACCAGCGGGATTTGCTGGGCCTCCTGGTGCTGATGGCCAGCCTGGGGCCAAGGGTGAG
CAAGGAGAGGCCGGCCAGAAAGGCGATGCTGGTGCCCCTGGTCCTCAGGGCCCCTCTGGAGCACCTGGGCCTCAGGGTCCTACTGGAGTGACTGGTCCTA
AAGGAGCCCGAGGTGCCCAAGGCCCCCCGGGAGCCACTGGATTCCCTGGAGCTGCTGGCCGCGTTGGACCCCCAGGCTCCAATGGCAACCCTGGACCCCC
TGGTCCCCCTGGTCCTTCTGGAAAAGATGGTCCCAAAGGTGCTCGAGGAGACAGCGGCCCCCCTGGCCGAGCTGGTGAACCCGGCCTCCAAGGTCCTGCT
GGACCCCCTGGCGAGAAGGGAGAGCCTGGAGATGACGGTCCCTCTGGTGCCGAAGGTCCACCAGGTCCCCAGGGTCTGGCTGGTCAGAGAGGCATCGTCG
GTCTGCCTGGGCAACGTGGTGAGAGAGGATTCCCTGGCTTGCCTGGCCCGTCGGGTGAGCCCGGCAAGCAGGGTGCTCCTGGAGCATCTGGAGACAGAGG
TCCTCCTGGCCCCGTGGGTCCTCCTGGCCTGACGGGTCCTGCAGGTGAACCTGGACGAGAGGGAAGCCCCGGTGCTGATGGCCCCCCTGGCAGAGATGGC
GCTGCTGGAGTCAAGGGTGATCGTGGTGAGACTGGTGCTGTGGGAGCTCCTGGAGCCCCTGGGCCCCCTGGCTCCCCTGGCCCCGCTGGTCCAACTGGCA
AGCAAGGAGACAGAGGAGAAGCTGGTGCACAAGGCCCCATGGGACCCTCAGGACCAGCTGGAGCCCGGGGAATCCAGGGTCCTCAAGGCCCCAGAGGTGA
CAAAGGAGAGGCTGGAGAGCCTGGCGAGAGAGGCCTGAAGGGACACCGTGGCTTCACTGGTCTGCAGGGTCTGCCCGGCCCTCCTGGTCCTTCTGGAGAC
CAAGGTGCTTCTGGTCCTGCTGGTCCTTCTGGCCCTAGAGGTCCTCCTGGCCCCGTCGGTCCCTCTGGCAAAGATGGTGCTAATGGAATCCCTGGCCCCA
TTGGGCCTCCTGGTCCCCGTGGACGATCAGGCGAAACCGGCCCTGCTGGTCCTCCTGGAAATCCTGGACCCCCTGGTCCTCCAGGTCCCCCTGGCCCTGG
CATCGACATGTCCGCCTTTGCTGGCTTAGGCCCGAGAGAGAAGGGCCCCGACCCCCTGCAGTACATGCGGGCCGACCAGGCAGCCGGTGGCCTGAGACAG
CATGACGCCGAGGTGGATGCCACACTCAAGTCCCTCAACAACCAGATTGAGAGCATCCGCAGCCCCGAGGGCTCCCGCAAGAACCCTGCTCGCACCTGCA
GAGACCTGAAACTCTGCCACCCTGAGTGGAAGAGTGGAGACTACTGGATTGACCCCAACCAAGGCTGCACCTTGGACGCCATGAAGGTTTTCTGCAACAT
GGAGACTGGCGAGACTTGCGTCTACCCCAATCCAGCAAACGTTCCCAAGAAGAACTGGTGGAGCAGCAAGAGCAAGGAGAAGAAACACATCTGGTTTGGA
GAAACCATCAATGGTGGCTTCCATTTCAGCTATGGAGATGACAATCTGGCTCCCAACACTGCCAACGTCCAGATGACCTTCCTACGCCTGCTGTCCACGG
AAGGCTCCCAGAACATCACCTACCACTGCAAGAACAGCATTGCCTATCTGGACGAAGCAGCTGGCAACCTCAAGAAGGCCCTGCTCATCCAGGGCTCCAA
TGACGTGGAGATCCGGGCAGAGGGCAATAGCAGGTTCACGTACACTGCCCTGAAGGATGGCTGCACGAAACATACCGGTAAGTGGGGCAAGACTGTTATC
GAGTACCGGTCACAGAAGACCTCACGCCTCCCCATCATTGACATTGCACCCATGGACATAGGAGGGCCCGAGCAGGAATTCGGTGTGGACATAGGGCCGG
TCTGCTTCTTGTAAAAACCTGAACCCAGAAACAACACAATCCGTTGCAAACCCAAAGGACCCAAGTACTTTCCAATCTCAGTCACTCTAGGACTCTGCAC
TGAATGGCTGACCTGACCTGATGTCCATTCATCCCACCCTCTCACAGTTCGGACTTTTCTCCCCTCTCTTTCTAAGAGACCTGAACTGGGCAGACTGCAA
AATAAAATCTCGGTGTTCTATTTATTTATTGTCTTCCTGTAAGACCTTCGGGTCAAGGCAGAGGCAGGAAACTAACTGGTGTGAGTCAAATGCCCCCTGA
GTGACTGCCCCCAGCCCAGGCCAGAAGACCTCCCTTCAGGTGCCGGGCGCAGGAACTGTGTGTGTCCTACACAATGGTGCTATTCTGTGTCAAACACCTC
TGTATTTTTTAAAACATCAATTGATATTAAAAATGAAAAGATTATTGGAAAGT
  • refseq_COL2A1.F1 (forward primer)
  • refseq_COL2A1.R1 (reverse primer)
  • Single exon skipping

Frame 0

TQSAAGLPGLPLPPPAPRASCMRAR*RPGPAPC
SCRFAALRPGPAQPGPAVSHDSPRGSPDAGAADA
ARRRCPSVSGPGCPATRTKGTERRTWRHQGYCR
TQRTSWASGTCRGTRTQRGSW*QR*KRCPWTSW
QRWRTWDPWKSWPPWSSRPPWSPWSWWKLCCPDG
WRI**KGWWRPVGSNARTNGPHGTSRTSRPCRC
SWASRISRQSW*TW*TWCLWSHGSPWSSWSPWK
AW**W*SWKTWKSW*KGSAWSSGCSWFPRNPRPS
WCQRSQRLSRPGRC*GRGGCSWCEG*EWFPG*E
RISGPNGSSWPAW*KRTDWPCWRCGCPRQRWSA
RPRRASGSCRSCWWSWLPWCSWSQG*SRPHWCPW
S*RCSRSSR*TWYSWVPWACWCLR*PWNRWNSW
SQRICWCSWHCWCSWLPWATGPSWPSRCNWSSG
PERSDG*TWYCWLQR*TRPQGRTWPCWPPGSPWT
RW*RRQERCPWRAWWRWAHRSPWRKRCSRQPRF
PRSRWSGRSQGSPWRARAQWSCWPQGSQR*PWP
SWRTWPSWSPGSHWPPW*CWSSRQSWPFWSPW*R
WSSWTSRSSGGSWAAWCHGFPWPQRCQR*AWQS
W*EGTAWCSWSEGSSWQRW*DRCCRTPWPCWTC
W*TRRAGCSWAIWVPGTSWPSWSPR*RWKTR*PG
CSR*SWSPWPRGSQG*TRFPR*TWLSRCPGPPG
SPWPPRHSWH*WSQRCIWPSRPPWGSGPSRSSG
NAWREGSSWYRWAQRRQG*RW*ERP*GSPWKGWW
TRPDRSHWPPWPSWC*WREGRSWTSWSCRKCWC
SWRSG*TWRDWAPRTSGICWASWC*WPAWGQG*
ARRGRPERRCWCPWSSGPLWSTWASGSYWSDWS*
RSPRCPRPPGSHWIPWSCWPRWTPRLQWQPWTP
WSPWSFWKRWSQRCSRRQRPPWPSW*TRPPRSC
WTPWREGRAWR*RSLWCRRSTRSPGSGWSERHRR
SAWATW*ERIPWLAWPVG*ARQAGCSWSIWRQR
SSWPRGSSWPDGSCR*TWTRGKPRC*WPPWQRW
RCWSQG*SW*DWCCGSSWSPWAPWLPWPRWSNWQ
ARRQRRSWCTRPHGTLRTSWSPGNPGSSRPQR*
QRRGWRAWRERPEGTPWLHWSAGSARPSWSFWR
PRCFWSCWSFWP*RSSWPRRSLWQRWC*WNPWPH
WASWSPWTIRRNRPCWSSWKSWTPWSSRSPWPW
HRHVRLCWLRPEREGPRPPAVHAGRPGSRWPET
A*RRGGCHTQVPQQPD*EHPQPRGLPQEPCSHLQ
RPETLPP*VEEWRLLD*PQPRLHLGRHEGFLQH
GDWRDLRLPQSSKRSQEELVEQQEQGEETHLVW
RNHQWWLPFQLWR*QSGSQHCQRPDDLPTPAVHG
RLPEHHLPLQEQHCLSGRSSWQPQEGPAHPGLQ
*RGDPGRGQ*QVHVHCPEGWLHETYR*VGQDCY
RVPVTEDLTPPHH*HCTHGHRRARAGIRCGHRAG
LLLVKT*TQKQHNPLQTQRTQVLSNLSHSRTLH
*MADLT*CPFIPPSHSSDFSPLSF*ET*TGQTA
K*NLGVLFIYCLPVRPSGQGRGRKLTGVSQMPPE
*LPPAQARRPPFRCRAQELCVSYTMVLFCVKHL
CIF*NIN*Y*K*KDYWK

Frame 1

RRALLGCRVSRFPLLLQGPPA*GRGRDPDPRRA
PAVSLRSARARLSQAPR*AMIRLGAPQTLVLLT
LLVAAVLRCQGQDVRQPGPKGQKGEPGDIKDIVG
PKGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRG
RDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQM
AGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGA
PGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGK
PGDDGEAGKPGKAGERGPPGPQGARGFPGTPGL
PGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGEN
GSPGPMGPRGLPGERGRTGPAGAAGARGNDGQP
GPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGAR
GPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPG
AKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLG
PKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPG
PAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGF
PGQDGLAGPKGAPGERGPSGLAGPKGANGDPGR
PGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGE
DGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKA
GEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPA
GERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQ
GVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQG
PRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQG
MPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDG
GRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGA
RGAPGERGETGPPGPAGFAGPPGADGQPGAKGE
QGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGP
KGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPP
GPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPA
GPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIV
GLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRG
PPGPVGPPGLTGPAGEPGREGSPGADGPPGRDG
AAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTG
KQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGD
KGEAGEPGERGLKGHRGFTGLQGLPGPPGPSGD
QGASGPAGPSGPRGPPGPVGPSGKDGANGIPGP
IGPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPG
IDMSAFAGLGPREKGPDPLQYMRADQAAGGLRQ
HDAEVDATLKSLNNQIESIRSPEGSRKNPARTC
RDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNM
ETGETCVYPNPANVPKKNWWSSKSKEKKHIWFG
ETINGGFHFSYGDDNLAPNTANVQMTFLRLLST
EGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSN
DVEIRAEGNSRFTYTALKDGCTKHTGKWGKTVI
EYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGP
VCFL*KPEPRNNTIRCKPKGPKYFPISVTLGLCT
EWLT*PDVHSSHPLTVRTFLPSLSKRPELGRLQ
NKISVFYLFIVFL*DLRVKAEAGN*LV*VKCPL
SDCPQPRPEDLPSGAGRRNCVCPTQWCYSVSNTS
VFFKTSIDIKNEKIIGK

Frame 2

AERCWAAGSPASPSCSKGLLHEGAVETRTRAVL
LPFRCAPPGPGSARPRGEP*FASGLPRRWCC*R
CSSPLSFGVRARMSGNQDQRDRKENLETSRIL*
DPKDLLGLRDLQGNKDPEGIVVTKVKKVPLDLVA
EMENLGPLEILAPLVLPAPLVPLVLVETLLPRW
LEDLMKRLVAPSWE*CKDQWAPWDLEDLQALQV
LLGLKDFKAILVNLVNLVSLVPWVPVVLLVPLES
LVMMVKLENLEKLVKGVRLVLRVLVVSQEPQAF
LVSKVTEVIQAWTVLRERRVLLV*RVRVVPRVR
TDLRAQWVLVACLVKEDGLALLALRVPEATMVSQ
APQGLRVLSVLLVVLASLVLLEPRVKPAPLVPV
VLKVLKVLAVNLVLLGPLGLLVPPVTLEQMEFL
EPKDLLVLLALLVLLASLGHGALLALKVQLVLWA
RKVRRVNLVLLASKVNKAPRENLALLAPREPLD
PLVKKAREVPVESLVALGPSVPLEKEVLPATAV
SQVKMVWQVPREPLESEGPVVLLAPREPTVTLAV
LENLAFLEPGVSLAALVMLVLKAKLALLEPLVK
MVVLDLQVLRGLVGSLVSWVSLAPKVPTVSLAK
LVRRDCLVLLV*GVFLAKMVRQVLQDPLALLDLL
VNEASRVLLGHLGSRDFLALLVPQVKVENQVTR
VFPVKLEPLASWVPGVNEVSQVNVALPVPRASR
VPVASPALLALMVPKVHLAQQAPLGLRALQVFRE
CLARGEQLVSLGPKATGVTLVRKALREPLERMV
DEA*QVPLAPLAQLVLMARREKLDLLVLQEVLV
LVALRVNVERLGPPDQRDLLGLLVLMASLGPRVS
KERPARKAMLVPLVLRAPLEHLGLRVLLE*LVL
KEPEVPKAPREPLDSLELLAALDPQAPMATLDP
LVPLVLLEKMVPKVLEETAAPLAELVNPASKVLL
DPLARRESLEMTVPLVPKVHQVPRVWLVREASS
VCLGNVVREDSLACLARRVSPASRVLLEHLETE
VLLAPWVLLA*RVLQVNLDEREAPVLMAPLAEMA
LLESRVIVVRLVLWELLEPLGPLAPLAPLVQLA
SKETEEKLVHKAPWDPQDQLEPGESRVLKAPEV
TKERLESLAREA*RDTVASLVCRVCPALLVLLET
KVLLVLLVLLALEVLLAPSVPLAKMVLMESLAP
LGLLVPVDDQAKPALLVLLEILDPLVLQVPLAL
ASTCPPLLA*ARERRAPTPCSTCGPTRQPVA*DS
MTPRWMPHSSPSTTRLRASAAPRAPARTLLAPA
ET*NSATLSGRVETTGLTPTKAAPWTP*RFSAT
WRLARLASTPIQQTFPRRTGGAARARRRNTSGLE
KPSMVASISAMEMTIWLPTLPTSR*PSYACCPR
KAPRTSPTTARTALPIWTKQLATSRRPCSSRAP
MTWRSGQRAIAGSRTLP*RMAARNIPVSGARLLS
STGHRRPHASPSLTLHPWT*EGPSRNSVWT*GR
SASCKNLNPETTQSVANPKDPSTFQSQSL*DSA
LNG*PDLMSIHPTLSQFGLFSPLFLRDLNWADCK
IKSRCSIYLLSSCKTFGSRQRQETNWCESNAP*
VTAPSPGQKTSLQVPGAGTVCVLHNGAILCQTP
LYFLKHQLILKMKRLLES

Sequence NM_001844

ACGCAGAGCGCTGCTGGGCTGCCGGGTCTCCCGCTTCCCCCTCCTGCTCCAAGGGCCTCCTGCATGAGGGCGCGGTAGAGACCCGGACCCGCGCCGTGCT
CCTGCCGTTTCGCTGCGCTCCGCCCGGGCCCGGCTCAGCCAGGCCCCGCGGTGAGCCATGATTCGCCTCGGGGCTCCCCAGACGCTGGTGCTGCTGACGC
TGCTCGTCGCCGCTGTCCTTCGGTGTCAGGGCCAGGATGTCCAGGAGGCTGGCAGCTGTGTGCAGGATGGGCAGAGGTATAATGATAAGGATGTGTGGAA
GCCGGAGCCCTGCCGGATCTGTGTCTGTGACACTGGGACTGTCCTCTGCGACGACATAATCTGTGAAGACGTGAAAGACTGCCTCAGCCCTGAGATCCCC
TTCGGAGAGTGCTGCCCCATCTGCCCAACTGACCTCGCCACTGCCAGTG
GGCAACCAGGACCAAAGGGACAGAAAGGAGAACCTGGAGACATCAAGGATA
TTGTAGGACCCAAAGGACCTCCTGGGCCTCAGGGACCTGCAGGGGAACAAGGACCCAGAGGGGATCGTGGTGACAAAGGTGAAAAAGGTGCCCCTGGACC
TCGTGGCAGAGATGGAGAACCTGGGACCCCTGGAAATCCTGGCCCCCCTGGTCCTCCCGGCCCCCCTGGTCCCCCTGGTCTTGGTGGAAACTTTGCTGCC
CAGATGGCTGGAGGATTTGATGAAAAGGCTGGTGGCGCCCAGTTGGGAGTAATGCAAGGACCAATGGGCCCCATGGGACCTCGAGGACCTCCAGGCCCTG
CAGGTGCTCCTGGGCCTCAAGGATTTCAAGGCAATCCTGGTGAACCTGGTGAACCTGGTGTCTCTGGTCCCATGGGTCCCCGTGGTCCTCCTGGTCCCCC
TGGAAAGCCTGGTGATGATGGTGAAGCTGGAAAACCTGGAAAAGCTGGTGAAAGGGGTCCGCCTGGTCCTCAGGGTGCTCGTGGTTTCCCAGGAACCCCA
GGCCTTCCTGGTGTCAAAGGTCACAGAGGTTATCCAGGCCTGGACGGTGCTAAGGGAGAGGCGGGTGCTCCTGGTGTGAAGGGTGAGAGTGGTTCCCCGG
GTGAGAACGGATCTCCGGGCCCAATGGGTCCTCGTGGCCTGCCTGGTGAAAGAGGACGGACTGGCCCTGCTGGCGCTGCGGGTGCCCGAGGCAACGATGG
TCAGCCAGGCCCCGCAGGGCCTCCGGGTCCTGTCGGTCCTGCTGGTGGTCCTGGCTTCCCTGGTGCTCCTGGAGCCAAGGGTGAAGCCGGCCCCACTGGT
GCCCGTGGTCCTGAAGGTGCTCAAGGTCCTCGCGGTGAACCTGGTACTCCTGGGTCCCCTGGGCCTGCTGGTGCCTCCGGTAACCCTGGAACAGATGGAA
TTCCTGGAGCCAAAGGATCTGCTGGTGCTCCTGGCATTGCTGGTGCTCCTGGCTTCCCTGGGCCACGGGGCCCTCCTGGCCCTCAAGGTGCAACTGGTCC
TCTGGGCCCGAAAGGTCAGACGGGTGAACCTGGTATTGCTGGCTTCAAAGGTGAACAAGGCCCCAAGGGAGAACCTGGCCCTGCTGGCCCCCAGGGAGCC
CCTGGACCCGCTGGTGAAGAAGGCAAGAGAGGTGCCCGTGGAGAGCCTGGTGGCGTTGGGCCCATCGGTCCCCCTGGAGAAAGAGGTGCTCCCGGCAACC
GCGGTTTCCCAGGTCAAGATGGTCTGGCAGGTCCCAAGGGAGCCCCTGGAGAGCGAGGGCCCAGTGGTCTTGCTGGCCCCAAGGGAGCCAACGGTGACCC
TGGCCGTCCTGGAGAACCTGGCCTTCCTGGAGCCCGGGGTCTCACTGGCCGCCCTGGTGATGCTGGTCCTCAAGGCAAAGTTGGCCCTTCTGGAGCCCCT
GGTGAAGATGGTCGTCCTGGACCTCCAGGTCCTCAGGGGGCTCGTGGGCAGCCTGGTGTCATGGGTTTCCCTGGCCCCAAAGGTGCCAACGGTGAGCCTG
GCAAAGCTGGTGAGAAGGGACTGCCTGGTGCTCCTGGTCTGAGGGGTCTTCCTGGCAAAGATGGTGAGACAGGTGCTGCAGGACCCCCTGGCCCTGCTGG
ACCTGCTGGTGAACGAGGCGAGCAGGGTGCTCCTGGGCCATCTGGGTTCCAGGGACTTCCTGGCCCTCCTGGTCCCCCAGGTGAAGGTGGAAAACCAGGT
GACCAGGGTGTTCCCGGTGAAGCTGGAGCCCCTGGCCTCGTGGGTCCCAGGGGTGAACGAGGTTTCCCAGGTGAACGTGGCTCTCCCGGTGCCCAGGGCC
TCCAGGGTCCCCGTGGCCTCCCCGGCACTCCTGGCACTGATGGTCCCAAAGGTGCATCTGGCCCAGCAGGCCCCCCTGGGGCTCAGGGCCCTCCAGGTCT
TCAGGGAATGCCTGGCGAGAGGGGAGCAGCTGGTATCGCTGGGCCCAAAGGCGACAGGGGTGACGTTGGTGAGAAAGGCCCTGAGGGAGCCCCTGGAAAG
GATGGTGGACGAGGCCTGACAGGTCCCATTGGCCCCCCTGGCCCAGCTGGTGCTAATGGCGAGAAGGGAGAAGTTGGACCTCCTGGTCCTGCAGGAAGTG
CTGGTGCTCGTGGCGCTCCGGGTGAACGTGGAGAGACTGGGCCCCCCGGACCAGCGGGATTTGCTGGGCCTCCTGGTGCTGATGGCCAGCCTGGGGCCAA
GGGTGAGCAAGGAGAGGCCGGCCAGAAAGGCGATGCTGGTGCCCCTGGTCCTCAGGGCCCCTCTGGAGCACCTGGGCCTCAGGGTCCTACTGGAGTGACT
GGTCCTAAAGGAGCCCGAGGTGCCCAAGGCCCCCCGGGAGCCACTGGATTCCCTGGAGCTGCTGGCCGCGTTGGACCCCCAGGCTCCAATGGCAACCCTG
GACCCCCTGGTCCCCCTGGTCCTTCTGGAAAAGATGGTCCCAAAGGTGCTCGAGGAGACAGCGGCCCCCCTGGCCGAGCTGGTGAACCCGGCCTCCAAGG
TCCTGCTGGACCCCCTGGCGAGAAGGGAGAGCCTGGAGATGACGGTCCCTCTGGTGCCGAAGGTCCACCAGGTCCCCAGGGTCTGGCTGGTCAGAGAGGC
ATCGTCGGTCTGCCTGGGCAACGTGGTGAGAGAGGATTCCCTGGCTTGCCTGGCCCGTCGGGTGAGCCCGGCAAGCAGGGTGCTCCTGGAGCATCTGGAG
ACAGAGGTCCTCCTGGCCCCGTGGGTCCTCCTGGCCTGACGGGTCCTGCAGGTGAACCTGGACGAGAGGGAAGCCCCGGTGCTGATGGCCCCCCTGGCAG
AGATGGCGCTGCTGGAGTCAAGGGTGATCGTGGTGAGACTGGTGCTGTGGGAGCTCCTGGAGCCCCTGGGCCCCCTGGCTCCCCTGGCCCCGCTGGTCCA
ACTGGCAAGCAAGGAGACAGAGGAGAAGCTGGTGCACAAGGCCCCATGGGACCCTCAGGACCAGCTGGAGCCCGGGGAATCCAGGGTCCTCAAGGCCCCA
GAGGTGACAAAGGAGAGGCTGGAGAGCCTGGCGAGAGAGGCCTGAAGGGACACCGTGGCTTCACTGGTCTGCAGGGTCTGCCCGGCCCTCCTGGTCCTTC
TGGAGACCAAGGTGCTTCTGGTCCTGCTGGTCCTTCTGGCCCTAGAGGTCCTCCTGGCCCCGTCGGTCCCTCTGGCAAAGATGGTGCTAATGGAATCCCT
GGCCCCATTGGGCCTCCTGGTCCCCGTGGACGATCAGGCGAAACCGGCCCTGCTGGTCCTCCTGGAAATCCTGGACCCCCTGGTCCTCCAGGTCCCCCTG
GCCCTGGCATCGACATGTCCGCCTTTGCTGGCTTAGGCCCGAGAGAGAAGGGCCCCGACCCCCTGCAGTACATGCGGGCCGACCAGGCAGCCGGTGGCCT
GAGACAGCATGACGCCGAGGTGGATGCCACACTCAAGTCCCTCAACAACCAGATTGAGAGCATCCGCAGCCCCGAGGGCTCCCGCAAGAACCCTGCTCGC
ACCTGCAGAGACCTGAAACTCTGCCACCCTGAGTGGAAGAGTGGAGACTACTGGATTGACCCCAACCAAGGCTGCACCTTGGACGCCATGAAGGTTTTCT
GCAACATGGAGACTGGCGAGACTTGCGTCTACCCCAATCCAGCAAACGTTCCCAAGAAGAACTGGTGGAGCAGCAAGAGCAAGGAGAAGAAACACATCTG
GTTTGGAGAAACCATCAATGGTGGCTTCCATTTCAGCTATGGAGATGACAATCTGGCTCCCAACACTGCCAACGTCCAGATGACCTTCCTACGCCTGCTG
TCCACGGAAGGCTCCCAGAACATCACCTACCACTGCAAGAACAGCATTGCCTATCTGGACGAAGCAGCTGGCAACCTCAAGAAGGCCCTGCTCATCCAGG
GCTCCAATGACGTGGAGATCCGGGCAGAGGGCAATAGCAGGTTCACGTACACTGCCCTGAAGGATGGCTGCACGAAACATACCGGTAAGTGGGGCAAGAC
TGTTATCGAGTACCGGTCACAGAAGACCTCACGCCTCCCCATCATTGACATTGCACCCATGGACATAGGAGGGCCCGAGCAGGAATTCGGTGTGGACATA
GGGCCGGTCTGCTTCTTGTAAAAACCTGAACCCAGAAACAACACAATCCGTTGCAAACCCAAAGGACCCAAGTACTTTCCAATCTCAGTCACTCTAGGAC
TCTGCACTGAATGGCTGACCTGACCTGATGTCCATTCATCCCACCCTCTCACAGTTCGGACTTTTCTCCCCTCTCTTTCTAAGAGACCTGAACTGGGCAG
ACTGCAAAATAAAATCTCGGTGTTCTATTTATTTATTGTCTTCCTGTAAGACCTTCGGGTCAAGGCAGAGGCAGGAAACTAACTGGTGTGAGTCAAATGC
CCCCTGAGTGACTGCCCCCAGCCCAGGCCAGAAGACCTCCCTTCAGGTGCCGGGCGCAGGAACTGTGTGTGTCCTACACAATGGTGCTATTCTGTGTCAA
ACACCTCTGTATTTTTTAAAACATCAATTGATATTAAAAATGAAAAGATTATTGGAAAGT
  • refseq_COL2A1.F1 (forward primer)
  • refseq_COL2A1.R1 (reverse primer)
  • Single exon skipping

Frame 0

TQSAAGLPGLPLPPPAPRASCMRAR*RPGPAPC
SCRFAALRPGPAQPGPAVSHDSPRGSPDAGAADA
ARRRCPSVSGPGCPGGWQLCAGWAEV***GCVE
AGALPDLCL*HWDCPLRRHNL*RRERLPQP*DP
LRRVLPHLPN*PRHCQW
ATRTKGTERRTWRHQGY
CRTQRTSWASGTCRGTRTQRGSW*QR*KRCPWT
SWQRWRTWDPWKSWPPWSSRPPWSPWSWWKLCC
PDGWRI**KGWWRPVGSNARTNGPHGTSRTSRPC
RCSWASRISRQSW*TW*TWCLWSHGSPWSSWSP
WKAW**W*SWKTWKSW*KGSAWSSGCSWFPRNP
RPSWCQRSQRLSRPGRC*GRGGCSWCEG*EWFPG
*ERISGPNGSSWPAW*KRTDWPCWRCGCPRQRW
SARPRRASGSCRSCWWSWLPWCSWSQG*SRPHW
CPWS*RCSRSSR*TWYSWVPWACWCLR*PWNRWN
SWSQRICWCSWHCWCSWLPWATGPSWPSRCNWS
SGPERSDG*TWYCWLQR*TRPQGRTWPCWPPGS
PWTRW*RRQERCPWRAWWRWAHRSPWRKRCSRQP
RFPRSRWSGRSQGSPWRARAQWSCWPQGSQR*P
WPSWRTWPSWSPGSHWPPW*CWSSRQSWPFWSP
W*RWSSWTSRSSGGSWAAWCHGFPWPQRCQR*AW
QSW*EGTAWCSWSEGSSWQRW*DRCCRTPWPCW
TCW*TRRAGCSWAIWVPGTSWPSWSPR*RWKTR
*PGCSR*SWSPWPRGSQG*TRFPR*TWLSRCPGP
PGSPWPPRHSWH*WSQRCIWPSRPPWGSGPSRS
SGNAWREGSSWYRWAQRRQG*RW*ERP*GSPWK
GWWTRPDRSHWPPWPSWC*WREGRSWTSWSCRKC
WCSWRSG*TWRDWAPRTSGICWASWC*WPAWGQ
G*ARRGRPERRCWCPWSSGPLWSTWASGSYWSD
WS*RSPRCPRPPGSHWIPWSCWPRWTPRLQWQPW
TPWSPWSFWKRWSQRCSRRQRPPWPSW*TRPPR
SCWTPWREGRAWR*RSLWCRRSTRSPGSGWSER
HRRSAWATW*ERIPWLAWPVG*ARQAGCSWSIWR
QRSSWPRGSSWPDGSCR*TWTRGKPRC*WPPWQ
RWRCWSQG*SW*DWCCGSSWSPWAPWLPWPRWS
NWQARRQRRSWCTRPHGTLRTSWSPGNPGSSRPQ
R*QRRGWRAWRERPEGTPWLHWSAGSARPSWSF
WRPRCFWSCWSFWP*RSSWPRRSLWQRWC*WNP
WPHWASWSPWTIRRNRPCWSSWKSWTPWSSRSPW
PWHRHVRLCWLRPEREGPRPPAVHAGRPGSRWP
ETA*RRGGCHTQVPQQPD*EHPQPRGLPQEPCS
HLQRPETLPP*VEEWRLLD*PQPRLHLGRHEGFL
QHGDWRDLRLPQSSKRSQEELVEQQEQGEETHL
VWRNHQWWLPFQLWR*QSGSQHCQRPDDLPTPA
VHGRLPEHHLPLQEQHCLSGRSSWQPQEGPAHPG
LQ*RGDPGRGQ*QVHVHCPEGWLHETYR*VGQD
CYRVPVTEDLTPPHH*HCTHGHRRARAGIRCGH
RAGLLLVKT*TQKQHNPLQTQRTQVLSNLSHSRT
LH*MADLT*CPFIPPSHSSDFSPLSF*ET*TGQ
TAK*NLGVLFIYCLPVRPSGQGRGRKLTGVSQM
PPE*LPPAQARRPPFRCRAQELCVSYTMVLFCVK
HLCIF*NIN*Y*K*KDYWK

Frame 1

RRALLGCRVSRFPLLLQGPPA*GRGRDPDPRRA
PAVSLRSARARLSQAPR*AMIRLGAPQTLVLLT
LLVAAVLRCQGQDVQEAGSCVQDGQRYNDKDVWK
PEPCRICVCDTGTVLCDDIICEDVKDCLSPEIP
FGECCPICPTDLATAS
GQPGPKGQKGEPGDIKD
IVGPKGPPGPQGPAGEQGPRGDRGDKGEKGAPGP
RGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAA
QMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGP
AGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPP
GKPGDDGEAGKPGKAGERGPPGPQGARGFPGTP
GLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSP
GENGSPGPMGPRGLPGERGRTGPAGAAGARGNDG
QPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTG
ARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDG
IPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGP
LGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGA
PGPAGEEGKRGARGEPGGVGPIGPPGERGAPGN
RGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDP
GRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAP
GEDGRPGPPGPQGARGQPGVMGFPGPKGANGEP
GKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAG
PAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPG
DQGVPGEAGAPGLVGPRGERGFPGERGSPGAQG
LQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGL
QGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGK
DGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGS
AGARGAPGERGETGPPGPAGFAGPPGADGQPGAK
GEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVT
GPKGARGAQGPPGATGFPGAAGRVGPPGSNGNP
GPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQG
PAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRG
IVGLPGQRGERGFPGLPGPSGEPGKQGAPGASG
DRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGR
DGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGP
TGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGP
RGDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPS
GDQGASGPAGPSGPRGPPGPVGPSGKDGANGIP
GPIGPPGPRGRSGETGPAGPPGNPGPPGPPGPP
GPGIDMSAFAGLGPREKGPDPLQYMRADQAAGGL
RQHDAEVDATLKSLNNQIESIRSPEGSRKNPAR
TCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVF
CNMETGETCVYPNPANVPKKNWWSSKSKEKKHIW
FGETINGGFHFSYGDDNLAPNTANVQMTFLRLL
STEGSQNITYHCKNSIAYLDEAAGNLKKALLIQ
GSNDVEIRAEGNSRFTYTALKDGCTKHTGKWGKT
VIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDI
GPVCFL*KPEPRNNTIRCKPKGPKYFPISVTLG
LCTEWLT*PDVHSSHPLTVRTFLPSLSKRPELGR
LQNKISVFYLFIVFL*DLRVKAEAGN*LV*VKC
PLSDCPQPRPEDLPSGAGRRNCVCPTQWCYSVS
NTSVFFKTSIDIKNEKIIGK

Frame 2

AERCWAAGSPASPSCSKGLLHEGAVETRTRAVL
LPFRCAPPGPGSARPRGEP*FASGLPRRWCC*R
CSSPLSFGVRARMSRRLAAVCRMGRGIMIRMCG
SRSPAGSVSVTLGLSSATT*SVKT*KTASALRSP
SESAAPSAQLTSPLPV
GNQDQRDRKENLETSRI
L*DPKDLLGLRDLQGNKDPEGIVVTKVKKVPLD
LVAEMENLGPLEILAPLVLPAPLVPLVLVETLLP
RWLEDLMKRLVAPSWE*CKDQWAPWDLEDLQAL
QVLLGLKDFKAILVNLVNLVSLVPWVPVVLLVP
LESLVMMVKLENLEKLVKGVRLVLRVLVVSQEPQ
AFLVSKVTEVIQAWTVLRERRVLLV*RVRVVPR
VRTDLRAQWVLVACLVKEDGLALLALRVPEATM
VSQAPQGLRVLSVLLVVLASLVLLEPRVKPAPLV
PVVLKVLKVLAVNLVLLGPLGLLVPPVTLEQME
FLEPKDLLVLLALLVLLASLGHGALLALKVQLV
LWARKVRRVNLVLLASKVNKAPRENLALLAPREP
LDPLVKKAREVPVESLVALGPSVPLEKEVLPAT
AVSQVKMVWQVPREPLESEGPVVLLAPREPTVT
LAVLENLAFLEPGVSLAALVMLVLKAKLALLEPL
VKMVVLDLQVLRGLVGSLVSWVSLAPKVPTVSL
AKLVRRDCLVLLV*GVFLAKMVRQVLQDPLALL
DLLVNEASRVLLGHLGSRDFLALLVPQVKVENQV
TRVFPVKLEPLASWVPGVNEVSQVNVALPVPRA
SRVPVASPALLALMVPKVHLAQQAPLGLRALQV
FRECLARGEQLVSLGPKATGVTLVRKALREPLER
MVDEA*QVPLAPLAQLVLMARREKLDLLVLQEV
LVLVALRVNVERLGPPDQRDLLGLLVLMASLGP
RVSKERPARKAMLVPLVLRAPLEHLGLRVLLE*L
VLKEPEVPKAPREPLDSLELLAALDPQAPMATL
DPLVPLVLLEKMVPKVLEETAAPLAELVNPASK
VLLDPLARRESLEMTVPLVPKVHQVPRVWLVREA
SSVCLGNVVREDSLACLARRVSPASRVLLEHLE
TEVLLAPWVLLA*RVLQVNLDEREAPVLMAPLA
EMALLESRVIVVRLVLWELLEPLGPLAPLAPLVQ
LASKETEEKLVHKAPWDPQDQLEPGESRVLKAP
EVTKERLESLAREA*RDTVASLVCRVCPALLVL
LETKVLLVLLVLLALEVLLAPSVPLAKMVLMESL
APLGLLVPVDDQAKPALLVLLEILDPLVLQVPL
ALASTCPPLLA*ARERRAPTPCSTCGPTRQPVA
*DSMTPRWMPHSSPSTTRLRASAAPRAPARTLLA
PAET*NSATLSGRVETTGLTPTKAAPWTP*RFS
ATWRLARLASTPIQQTFPRRTGGAARARRRNTS
GLEKPSMVASISAMEMTIWLPTLPTSR*PSYACC
PRKAPRTSPTTARTALPIWTKQLATSRRPCSSR
APMTWRSGQRAIAGSRTLP*RMAARNIPVSGAR
LLSSTGHRRPHASPSLTLHPWT*EGPSRNSVWT*
GRSASCKNLNPETTQSVANPKDPSTFQSQSL*D
SALNG*PDLMSIHPTLSQFGLFSPLFLRDLNWA
DCKIKSRCSIYLLSSCKTFGSRQRQETNWCESNA
P*VTAPSPGQKTSLQVPGAGTVCVLHNGAILCQ
TPLYFLKHQLILKMKRLLES

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