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Sequences

Sequence NM_001001895

GTGCAGGCGAGCTTCTTGGCCTAAGGGCAGGAAGAGATGGCAGCGGGGGAGACGCAGCTCTACGCCAAGGTCTCCAACAAGCTCAAGAGCCGCAGCAGCC
CCTCGCTCCTGGAGCCCCTCCTGGCCATGGGCTTCCCGGTGCACACCGCGCTGAAAGCGTTGGCAGCCACGGGGAGGAAGACGGCGGAGGAGGCCTTGGC
CTGGCTGCATGATCATTGCAATGACCCTTCCCTAGACGACCCCATCCCCCAGGAGTATGCCCTTTTCCTCTGTCCAACGGGGCCCCTGCTGGAAAAACTT
CAAGAGTTCTGGAGAGAGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCATGAGGTCTTCCCACACGTGACACTCTGTGACTTCTTCACGTGTGAAGACC
AGAAGGTGGAATGCCTGTACGAGGCGCTGAAGAGAGCTGGAGACAGGCTCCTGGGCTCCTTCCCCACGGCCGTGCCTCTGGCTCTCCACTCCTCCATCAG
CTACCTCGGCTTCTTCGTCAGTGGCAGCCCCGCAGACGTCATCCGGGAATTCGCCATGACCTTCGCCACGGAAGCATCTCTCTTAGCAGACTGCTCCGTG
AAGCCTTGCACCAAACAGCTGCATCTGACCTTGGCCCACAAGTTCTACCCCCACCACCAGAGGACGCTGGAGCAGCTGGCCAGAGCCATCCCCCTGGGCC
ACAGCTGCCAGTGGACCGCAGCACTCTACTCCCGAGACATGCGCTTTGTGCACTACCAGACCCTGAGAGCCCTATTCCAGTACAAACCCCAGAACGTGGA
TGAGCTGACGCTAAGTCCTGGTGACTACATCTTTGTGGACCCCACGCAGCAGGACGAAGCCAGCGAGGGCTGGGTGATTGGGATCTCACAGCGGACGGGC
TGCCGGGGCTTCCTGCCGGAAAACTACACGGATCGAGCCAGTGAGTCTGACACGTGGGTGAAGCACAGGATGTACACCTTCAGTCTAGCCACAGACCTGA
ACTCCAGAAAGGATGGTGAAGCCAGCAGCAGATGCAGCGGGGAATTTCTTCCACAAACGGCAAGGAGTCTTAGCAGCTTACAGGCCTTGCAGGCTACCGT
TGCAAGGAAGAGCGTGCTGGTGGTTCGCCACGGGGAGAGAGTGGATCAGATCTTCGGGAAGGCATGGCTGCAGCAATGCTCCACTCCTGATGGGAAATAC
TACAGGCCAGACCTGAATTTCCCCTGCAGTCTGCCAAGACGGAGTCGTGGGATCAAAGACTTTGAAAACGATCCCCCATTATCATCGTGTGGCATTTTCC
AGTCCAGAATTGCAGGGGACGCGCTACTGGACAGTGGTATCAGAATCAGCTCTGTGTTTGCCTCCCCAGCCCTCCGCTGTGTGCAGACGGCCAAACTCAT
CCTGGAAGAACTCAAACTGGAGAAAAAAATCAAGATACGAGTGGAACCTGGAATCTTTGAATGGACAAAATGGGAAGCTGGCAAAACCACCCCAACCCTC
ATGAGCCTGGAAGAGCTGAAAGAGGCAAATTTCAACATTGACACTGATTACAGGCCCGCGTTTCCCCTGTCCGCCCTCATGCCGGCCGAGAGCTACCAGG
AGTACATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACCTGTCCACAGGACACGGGTGTCATCCTAATTGTGAGTCACGGCTCCACTCTGGA
CTCCTGCACGCGGCCACTGCTCGGGCTGCCGCCCCGGGAATGTGGGGATTTTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGTGCTTCTGTGAA
GAAAATAAAGAGGAAGGAAAATGGGAGTTGGTGAACCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAG
GCAACTGAGAGCCACGGTGATGTTGTCATAACCTCAGAGTGGAGAGGCAGAAACCATGTGCAGAGGCTGGGAGATGCTGCTGTTTCCAGAGGCGTCTTAG
TCTCACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATC
GTCCACCAGCCCAGCTGCGGGGAGCACAGGGCAGGTGGCTGGGTGAGGATGCCGCCCTGCAGCATGTACACCGAGTGTCTGCAGCTGGGGACACAACTGC
CCGGGACTCTAACTTCCAGGAATTAAAGACTCACCACACACGAAGGATCTAACCACTTCATTTTCCATGGTCTAATCATTAAATTCCCAATCGTTTTTTC
TTTTTCTGGGTCCATCACTCTTTAGCCATATCCACATGGGCTAAAACAGGTGTAATAGTCAATAAAATGGTCCCAGAA
  • refseq_UBASH3A.F1 (forward primer)
  • refseq_UBASH3A.R1 (reverse primer)
  • Single exon skipping

Frame 0

VQASFLA*GQEEMAAGETQLYAKVSNKLKSRSS
PSLLEPLLAMGFPVHTALKALAATGRKTAEEALA
WLHDHCNDPSLDDPIPQEYALFLCPTGPLLEKL
QEFWRESKRQCAKNRAHEVFPHVTLCDFFTCED
QKVECLYEALKRAGDRLLGSFPTAVPLALHSSIS
YLGFFVSGSPADVIREFAMTFATEASLLADCSV
KPCTKQLHLTLAHKFYPHHQRTLEQLARAIPLG
HSCQWTAALYSRDMRFVHYQTLRALFQYKPQNVD
ELTLSPGDYIFVDPTQQDEASEGWVIGISQRTG
CRGFLPENYTDRASESDTWVKHRMYTFSLATDL
NSRKDGEASSRCSGEFLPQTARSLSSLQALQATV
ARKSVLVVRHGERVDQIFGKAWLQQCSTPDGKY
YRPDLNFPCSLPRRSRGIKDFENDPPLSSCGIF
QSRIAGDALLDSGIRISSVFASPALRCVQTAKLI
LEELKLEKKIKIRVEPGIFEWTKWEAGKTTPTL
MSLEELKEANFNIDTDYRPAFPLSALMPAESYQ
EYMDRCTASMVQIVNTCPQDTGVILIVSHGSTLD
SCTRPLLGLPPRECGDFAQLVRKIPSLGMCFCE
ENKEEGKWELVNPPVKTLTHGANAAFNWRNWIS
GN*EPR*CCHNLRVERQKPCAEAGRCCCFQRRLS
LTQCDL*KHETHFYIPEYFPPAFAFVTPICGPI
VHQPSCGEHRAGGWVRMPPCSMYTECLQLGTQL
PGTLTSRN*RLTTHEGSNHFIFHGLIIKFPIVFS
FSGSITL*PYPHGLKQV**SIKWSQ

Frame 1

CRRASWPKGRKRWQRGRRSSTPRSPTSSRAAAA
PRSWSPSWPWASRCTPR*KRWQPRGGRRRRRPW
PGCMIIAMTLP*TTPSPRSMPFSSVQRGPCWKNF
KSSGERASASVQRTELMRSSHT*HSVTSSRVKT
RRWNACTRR*RELETGSWAPSPRPCLWLSTPPS
ATSASSSVAAPQTSSGNSP*PSPRKHLS*QTAP*
SLAPNSCI*PWPTSSTPTTRGRWSSWPEPSPWA
TAASGPQHSTPETCALCTTRP*EPYSSTNPRTW
MS*R*VLVTTSLWTPRSRTKPARAG*LGSHSGRA
AGASCRKTTRIEPVSLTRG*STGCTPSV*PQT*
TPERMVKPAADAAGNFFHKRQGVLAAYRPCRLP
LQGRACWWFATGREWIRSSGRHGCSNAPLLMGNT
TGQT*ISPAVCQDGVVGSKTLKTIPHYHRVAFS
SPELQGTRYWTVVSESALCLPPQPSAVCRRPNS
SWKNSNWRKKSRYEWNLESLNGQNGKLAKPPQPS
*AWKS*KRQISTLTLITGPRFPCPPSCRPRATR
STWTGARRAWCKSSTPVHRTRVSS*L*VTAPLW
TPARGHCSGCRPGNVGILPNS*ERSLPWACASVK
KIKRKENGSW*THR*RP*PTGRTQHLTGGTGSQ
ATESHGDVVITSEWRGRNHVQRLGDAAVSRGVL
VSPNVICRSTRRTFISRNISLRLSPL*LPSVDPS
STSPAAGSTGQVAG*GCRPAACTPSVCSWGHNC
PGL*LPGIKDSPHTKDLTTSFSMV*SLNSQSFF
LFLGPSLFSHIHMG*NRCNSQ*NGPR

Frame 2

AGELLGLRAGRDGSGGDAALRQGLQQAQEPQQP
LAPGAPPGHGLPGAHRAESVGSHGEEDGGGGLG
LAA*SLQ*PFPRRPHPPGVCPFPLSNGAPAGKT
SRVLEREQAPVCKEQSS*GLPTRDTL*LLHV*RP
EGGMPVRGAEESWRQAPGLLPHGRASGSPLLHQ
LPRLLRQWQPRRRHPGIRHDLRHGSISLSRLLR
EALHQTAASDLGPQVLPPPPEDAGAAGQSHPPGP
QLPVDRSTLLPRHALCALPDPESPIPVQTPERG
*ADAKSW*LHLCGPHAAGRSQRGLGDWDLTADG
LPGLPAGKLHGSSQ*V*HVGEAQDVHLQSSHRPE
LQKGW*SQQQMQRGISSTNGKES*QLTGLAGYR
CKEERAGGSPRGESGSDLREGMAAAMLHS*WEI
LQARPEFPLQSAKTESWDQRL*KRSPIIIVWHFP
VQNCRGRATGQWYQNQLCVCLPSPPLCADGQTH
PGRTQTGEKNQDTSGTWNL*MDKMGSWQNHPNP
HEPGRAERGKFQH*H*LQARVSPVRPHAGRELPG
VHGQVHGEHGANRQHLSTGHGCHPNCESRLHSG
LLHAATARAAAPGMWGFCPTREKDPFPGHVLL*
RK*RGRKMGVGEPTGEDPDPRGERSI*LEELDLR
QLRATVMLS*PQSGEAETMCRGWEMLLFPEAS*
SHPM*FVEARDALLYPGIFPSGFRLCNSHLWTH
RPPAQLRGAQGRWLGEDAALQHVHRVSAAGDTTA
RDSNFQELKTHHTRRI*PLHFPWSNH*IPNRFF
FFWVHHSLAISTWAKTGVIVNKMVPE

Sequence NM_018961

GTGCAGGCGAGCTTCTTGGCCTAAGGGCAGGAAGAGATGGCAGCGGGGGAGACGCAGCTCTACGCCAAGGTCTCCAACAAGCTCAAGAGCCGCAGCAGCC
CCTCGCTCCTGGAGCCCCTCCTGGCCATGGGCTTCCCGGTGCACACCGCGCTGAAAGCGTTGGCAGCCACGGGGAGGAAGACGGCGGAGGAGGCCTTGGC
CTGGCTGCATGATCATTGCAATGACCCTTCCCTAGACGACCCCATCCCCCAGGAGTATGCCCTTTTCCTCTGTCCAACGGGGCCCCTGCTGGAAAAACTT
CAAGAGTTCTGGAGAGAGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCATGAGGTCTTCCCACACGTGACACTCTGTGACTTCTTCACGTGTGAAGACC
AGAAGGTGGAATGCCTGTACGAGGCGCTGAAGAGAGCTGGAGACAGGCTCCTGGGCTCCTTCCCCACGGCCGTGCCTCTGGCTCTCCACTCCTCCATCAG
CTACCTCGGCTTCTTCGTCAGTGGCAGCCCCGCAGACGTCATCCGGGAATTCGCCATGACCTTCGCCACGGAAGCATCTCTCTTAGCAGGCACTTCCGTT
TCCCGCTTCTGGATTTTCAGCCAGGTGCCTGGACATGGCCCTAACCTGAGGCTGAGCAATTTAACTAGAGCCTCCTTCGTGAGCCACTACATCCTTCAAA
AATACTGCTCCGTGAAGCCTTGCACCAAACAGCTGCATCTGACCTTGGCCCACAAGTTCTACCCCCACCACCAGAGGACGCTGGAGCAGCTGGCCAGAGC
CATCCCCCTGGGCCACAGCTGCCAGTGGACCGCAGCACTCTACTCCCGAGACATGCGCTTTGTGCACTACCAGACCCTGAGAGCCCTATTCCAGTACAAA
CCCCAGAACGTGGATGAGCTGACGCTAAGTCCTGGTGACTACATCTTTGTGGACCCCACGCAGCAGGACGAAGCCAGCGAGGGCTGGGTGATTGGGATCT
CACAGCGGACGGGCTGCCGGGGCTTCCTGCCGGAAAACTACACGGATCGAGCCAGTGAGTCTGACACGTGGGTGAAGCACAGGATGTACACCTTCAGTCT
AGCCACAGACCTGAACTCCAGAAAGGATGGTGAAGCCAGCAGCAGATGCAGCGGGGAATTTCTTCCACAAACGGCAAGGAGTCTTAGCAGCTTACAGGCC
TTGCAGGCTACCGTTGCAAGGAAGAGCGTGCTGGTGGTTCGCCACGGGGAGAGAGTGGATCAGATCTTCGGGAAGGCATGGCTGCAGCAATGCTCCACTC
CTGATGGGAAATACTACAGGCCAGACCTGAATTTCCCCTGCAGTCTGCCAAGACGGAGTCGTGGGATCAAAGACTTTGAAAACGATCCCCCATTATCATC
GTGTGGCATTTTCCAGTCCAGAATTGCAGGGGACGCGCTACTGGACAGTGGTATCAGAATCAGCTCTGTGTTTGCCTCCCCAGCCCTCCGCTGTGTGCAG
ACGGCCAAACTCATCCTGGAAGAACTCAAACTGGAGAAAAAAATCAAGATACGAGTGGAACCTGGAATCTTTGAATGGACAAAATGGGAAGCTGGCAAAA
CCACCCCAACCCTCATGAGCCTGGAAGAGCTGAAAGAGGCAAATTTCAACATTGACACTGATTACAGGCCCGCGTTTCCCCTGTCCGCCCTCATGCCGGC
CGAGAGCTACCAGGAGTACATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACCTGTCCACAGGACACGGGTGTCATCCTAATTGTGAGTCAC
GGCTCCACTCTGGACTCCTGCACGCGGCCACTGCTCGGGCTGCCGCCCCGGGAATGTGGGGATTTTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGCA
TGTGCTTCTGTGAAGAAAATAAAGAGGAAGGAAAATGGGAGTTGGTGAACCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAG
GAACTGGATCTCAGGCAACTGAGAGCCACGGTGATGTTGTCATAACCTCAGAGTGGAGAGGCAGAAACCATGTGCAGAGGCTGGGAGATGCTGCTGTTTC
CAGAGGCGTCTTAGTCTCACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCA
TCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACAGGGCAGGTGGCTGGGTGAGGATGCCGCCCTGCAGCATGTACACCGAGTGTCTGCAGCT
GGGGACACAACTGCCCGGGACTCTAACTTCCAGGAATTAAAGACTCACCACACACGAAGGATCTAACCACTTCATTTTCCATGGTCTAATCATTAAATTC
CCAATCGTTTTTTCTTTTTCTGGGTCCATCACTCTTTAGCCATATCCACATGGGCTAAAACAGGTGTAATAGTCAATAAAATGGTCCCAGAA
  • refseq_UBASH3A.F1 (forward primer)
  • refseq_UBASH3A.R1 (reverse primer)
  • Single exon skipping

Frame 0

VQASFLA*GQEEMAAGETQLYAKVSNKLKSRSS
PSLLEPLLAMGFPVHTALKALAATGRKTAEEALA
WLHDHCNDPSLDDPIPQEYALFLCPTGPLLEKL
QEFWRESKRQCAKNRAHEVFPHVTLCDFFTCED
QKVECLYEALKRAGDRLLGSFPTAVPLALHSSIS
YLGFFVSGSPADVIREFAMTFATEASLLAGTSV
SRFWIFSQVPGHGPNLRLSNLTRASFVSHYILQ
KYCSVKPCTKQLHLTLAHKFYPHHQRTLEQLARA
IPLGHSCQWTAALYSRDMRFVHYQTLRALFQYK
PQNVDELTLSPGDYIFVDPTQQDEASEGWVIGI
SQRTGCRGFLPENYTDRASESDTWVKHRMYTFSL
ATDLNSRKDGEASSRCSGEFLPQTARSLSSLQA
LQATVARKSVLVVRHGERVDQIFGKAWLQQCST
PDGKYYRPDLNFPCSLPRRSRGIKDFENDPPLSS
CGIFQSRIAGDALLDSGIRISSVFASPALRCVQ
TAKLILEELKLEKKIKIRVEPGIFEWTKWEAGK
TTPTLMSLEELKEANFNIDTDYRPAFPLSALMPA
ESYQEYMDRCTASMVQIVNTCPQDTGVILIVSH
GSTLDSCTRPLLGLPPRECGDFAQLVRKIPSLG
MCFCEENKEEGKWELVNPPVKTLTHGANAAFNWR
NWISGN*EPR*CCHNLRVERQKPCAEAGRCCCF
QRRLSLTQCDL*KHETHFYIPEYFPPAFAFVTP
ICGPIVHQPSCGEHRAGGWVRMPPCSMYTECLQL
GTQLPGTLTSRN*RLTTHEGSNHFIFHGLIIKF
PIVFSFSGSITL*PYPHGLKQV**SIKWSQ

Frame 1

CRRASWPKGRKRWQRGRRSSTPRSPTSSRAAAA
PRSWSPSWPWASRCTPR*KRWQPRGGRRRRRPW
PGCMIIAMTLP*TTPSPRSMPFSSVQRGPCWKNF
KSSGERASASVQRTELMRSSHT*HSVTSSRVKT
RRWNACTRR*RELETGSWAPSPRPCLWLSTPPS
ATSASSSVAAPQTSSGNSP*PSPRKHLS*QALPF
PASGFSARCLDMALT*G*AI*LEPPS*ATTSFK
NTAP*SLAPNSCI*PWPTSSTPTTRGRWSSWPE
PSPWATAASGPQHSTPETCALCTTRP*EPYSSTN
PRTWMS*R*VLVTTSLWTPRSRTKPARAG*LGS
HSGRAAGASCRKTTRIEPVSLTRG*STGCTPSV
*PQT*TPERMVKPAADAAGNFFHKRQGVLAAYRP
CRLPLQGRACWWFATGREWIRSSGRHGCSNAPL
LMGNTTGQT*ISPAVCQDGVVGSKTLKTIPHYH
RVAFSSPELQGTRYWTVVSESALCLPPQPSAVCR
RPNSSWKNSNWRKKSRYEWNLESLNGQNGKLAK
PPQPS*AWKS*KRQISTLTLITGPRFPCPPSCR
PRATRSTWTGARRAWCKSSTPVHRTRVSS*L*VT
APLWTPARGHCSGCRPGNVGILPNS*ERSLPWA
CASVKKIKRKENGSW*THR*RP*PTGRTQHLTG
GTGSQATESHGDVVITSEWRGRNHVQRLGDAAVS
RGVLVSPNVICRSTRRTFISRNISLRLSPL*LP
SVDPSSTSPAAGSTGQVAG*GCRPAACTPSVCS
WGHNCPGL*LPGIKDSPHTKDLTTSFSMV*SLNS
QSFFLFLGPSLFSHIHMG*NRCNSQ*NGPR

Frame 2

AGELLGLRAGRDGSGGDAALRQGLQQAQEPQQP
LAPGAPPGHGLPGAHRAESVGSHGEEDGGGGLG
LAA*SLQ*PFPRRPHPPGVCPFPLSNGAPAGKT
SRVLEREQAPVCKEQSS*GLPTRDTL*LLHV*RP
EGGMPVRGAEESWRQAPGLLPHGRASGSPLLHQ
LPRLLRQWQPRRRHPGIRHDLRHGSISLSRHFR
FPLLDFQPGAWTWP*PEAEQFN*SLLREPLHPSK
ILLREALHQTAASDLGPQVLPPPPEDAGAAGQS
HPPGPQLPVDRSTLLPRHALCALPDPESPIPVQ
TPERG*ADAKSW*LHLCGPHAAGRSQRGLGDWDL
TADGLPGLPAGKLHGSSQ*V*HVGEAQDVHLQS
SHRPELQKGW*SQQQMQRGISSTNGKES*QLTG
LAGYRCKEERAGGSPRGESGSDLREGMAAAMLHS
*WEILQARPEFPLQSAKTESWDQRL*KRSPIII
VWHFPVQNCRGRATGQWYQNQLCVCLPSPPLCA
DGQTHPGRTQTGEKNQDTSGTWNL*MDKMGSWQN
HPNPHEPGRAERGKFQH*H*LQARVSPVRPHAG
RELPGVHGQVHGEHGANRQHLSTGHGCHPNCES
RLHSGLLHAATARAAAPGMWGFCPTREKDPFPGH
VLL*RK*RGRKMGVGEPTGEDPDPRGERSI*LE
ELDLRQLRATVMLS*PQSGEAETMCRGWEMLLF
PEAS*SHPM*FVEARDALLYPGIFPSGFRLCNSH
LWTHRPPAQLRGAQGRWLGEDAALQHVHRVSAA
GDTTARDSNFQELKTHHTRRI*PLHFPWSNH*I
PNRFFFFWVHHSLAISTWAKTGVIVNKMVPE

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