×
1 warning:
  • Access restricted to public data.
    Please sign in at Rnomics Platform to access your data.
Navigation
Sequences

Sequence BNIP1.bAug05

CCTGCCGCTGCCCGTAGCCGGCGTCCCCAACATGGCGGCTCCCCAAGACGTCCACGTCCGGATCTGTAACCAAGAGATTGTCAAATTTGACCTGGAGGTG
AAGGCGCTTATTCAGGATATCCGTGATTGTTCAGGACCCTTAAGTGCTCTTACTGAACTGAATACTAAAGTAAAAGAGAAATTTCAACAGTTGCGTCACA
GAATACAGCCAGTTCTCTATCAAAGGGCATTTATTTGGACTGCTTCCACATTTTTTTTTAAGCTAACTTATTCCCTGACAGACTTTTCTTCAACTCAGCA
TGACTTCAACTCTCCAACTACACCTGTTACCTTCAGTGACCTGGAGCAGTTGGCTAAAGAGCAAGACAAAGAATCAGAGAAACAACTTCTACTCCAGGAA
GTGGAGAATCACAAAAAGCAGATGCTCAGGAAAACCACCAAAGAGAGCCTGGCCCAGACATCCAGTACCATCACTGAGAGCCTCATGGGGATCAGCAGGA
TGATGGCCCAGCAGGTCCAGCAGAGCGAGGAGGCCATGCAGTCTCTAGTCACTTCTTCACGAACGATCCTGGATGCAAATGAAGAATTTAAGTCCATGTC
GGGCACCATCCAGCTGGGCCGGAAGCTTATCACAAAATACAATCGCCGGGAGCTGACGGACAAGCTTCTCATCTTCCTTGCGCTAGCCCTGTTTCTTGCT
ACGGTCCTCTATATTGTGAAAAAGCGGCTCTTTCCATTTTTGTGAGATCCCAAAGGTGCCAGTTCTGGCCCTTTCAGCTCCTGTTTCAGGATCTGTCCTG
GTTCCTGAGCTCTAGGCTGCTAAGCTGAGCCACACACCCCTCCGTTTGCACCAGTTGCCTGCAGGTTGGATGGAACACAGTGCCCCACTTTTCTGCAAGT
AGCTGGCTTGTAAAGGGTGAACAGAGCCATGGGAGGAAGGTCTGGCATTGGGATGCCGCCCTGGGGACATACGAACCGCCTCCTTCCACCATTGTGCACT
ATGGGAGGCCGCTGCTGCGTGGAGCACTTAAAGTCCAGCCTCCAGGACCGGATGCCCCTCCTGTCTCCCGCTCCCATCGTGCCCTTAAATGCCAGATCTG
GTGGAGGGAAGAGAGAAGAGGTAGGAAGAAAGGTGATGAAAACTCCTGGTCATTCCTTGAATAAACTTGATTTTATTTAATAGAATAAAATGTATTTGAT
TTTGTAAGATA
  • BNIP1-7 (forward primer)
  • BNIP1-8 (reverse primer)
  • Single exon skipping

Frame 0

PAAARSRRPQHGGSPRRPRPDL*PRDCQI*PGG
EGAYSGYP*LFRTLKCSY*TEY*SKREISTVASQ
NTASSLSKGIYLDCFHIFF*ANLFPDRLFFNSA
*LQLSNYTCYLQ*PGAVG*RARQRIRETTSTPG
SGESQKADAQENHQREPGPDIQYHH*EPHGDQQD
DGPAGPAERGGHAVSSHFFTNDPGCK*RI*VHV
GHHPAGPEAYHKIQSPGADGQASHLPCASPVSC
YGPLYCEKAALSIFVRSQRCQFWPFQLLFQDLSW
FLSSRLLS*ATHPSVCTSCLQVGWNTVPHFSAS
SWLVKGEQSHGRKVWHWDAALGTYEPPPSTIVH
YGRPLLRGALKVQPPGPDAPPVSRSHRALKCQIW
WREERRGRKKGDENSWSFLE*T*FYLIE*NVFD
FVR

Frame 1

LPLPVAGVPNMAAPQDVHVRICNQEIVKFDLEV
KALIQDIRDCSGPLSALTELNTKVKEKFQQLRH
RIQPVLYQRAFIWTASTFFFKLTYSLTDFSSTQH
DFNSPTTPVTFSDLEQLAKEQDKESEKQLLLQE
VENHKKQMLRKTTKESLAQTSSTITESLMGISR
MMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMS
GTIQLGRKLITKYNRRELTDKLLIFLALALFLA
TVLYIVKKRLFPFL*DPKGASSGPFSSCFRICP
GS*ALGC*AEPHTPPFAPVACRLDGTQCPTFLQV
AGL*RVNRAMGGRSGIGMPPWGHTNRLLPPLCT
MGGRCCVEHLKSSLQDRMPLLSPAPIVPLNARS
GGGKREEVGRKVMKTPGHSLNKLDFI**NKMYLI
L*D

Frame 2

CRCP*PASPTWRLPKTSTSGSVTKRLSNLTWR*
RRLFRISVIVQDP*VLLLN*ILK*KRNFNSCVT
EYSQFSIKGHLFGLLPHFFLS*LIP*QTFLQLS
MTSTLQLHLLPSVTWSSWLKSKTKNQRNNFYSRK
WRITKSRCSGKPPKRAWPRHPVPSLRASWGSAG
*WPSRSSRARRPCSL*SLLHERSWMQMKNLSPC
RAPSSWAGSLSQNTIAGS*RTSFSSSLR*PCFLL
RSSIL*KSGSFHFCEIPKVPVLALSAPVSGSVL
VPEL*AAKLSHTPLRLHQLPAGWMEHSAPLFCK
*LACKG*TEPWEEGLALGCRPGDIRTASFHHCAL
WEAAAAWST*SPASRTGCPSCLPLPSCP*MPDL
VEGREKR*EER**KLLVIP*INLILFNRIKCI*
FCKI

Sequence BNIP1.aAug05

CCTGCCGCTGCCCGTAGCCGGCGTCCCCAACATGGCGGCTCCCCAAGACGTCCACGTCCGGATCTGTAACCAAGAGATTGTCAAATTTGACCTGGAGGTG
AAGGCGCTTATTCAGGATATCCGTGATTGTTCAGGACCCTTAAGTGCTCTTACTGAACTGAATACTAAAGTAAAAGAGAAATTTCAACAGTTGCGTCACA
GAATACAGCCAGTTCTCTATCAAAGGGCATTTATTTGGACTGCTTCCACATTTTTTTTTAAGCTAACTTATTCCCTGACAGACTTTTCTTCAACTCAGCA
TGACTTCAACTCTCCAACTACACCTGTTACCTTCAGTGACCTGGAGCAGTTGGCTAAAGAGCAAGACAAAGAATCAGAGAAACAACTTCTACTCCAGGAA
GTGGAGAATCACAAAAAGCAGATGCTCAGCAATCAGGCCTCATGGAGGAAAGCTAATCTCACCTGCAAAATTGCAATCGACAATCTAGAGAAAGCAGAAC
TTCTTCAGGGAGGAGATCTCTTAAGGCAAAG
GAAAACCACCAAAGAGAGCCTGGCCCAGACATCCAGTACCATCACTGAGAGCCTCATGGGGATCAGCAG
GATGATGGCCCAGCAGGTCCAGCAGAGCGAGGAGGCCATGCAGTCTCTAGTCACTTCTTCACGAACGATCCTGGATGCAAATGAAGAATTTAAGTCCATG
TCGGGCACCATCCAGCTGGGCCGGAAGCTTATCACAAAATACAATCGCCGGGAGCTGACGGACAAGCTTCTCATCTTCCTTGCGCTAGCCCTGTTTCTTG
CTACGGTCCTCTATATTGTGAAAAAGCGGCTCTTTCCATTTTTGTGAGATCCCAAAGGTGCCAGTTCTGGCCCTTTCAGCTCCTGTTTCAGGATCTGTCC
TGGTTCCTGAGCTCTAGGCTGCTAAGCTGAGCCACACACCCCTCCGTTTGCACCAGTTGCCTGCAGGTTGGATGGAACACAGTGCCCCACTTTTCTGCAA
GTAGCTGGCTTGTAAAGGGTGAACAGAGCCATGGGAGGAAGGTCTGGCATTGGGATGCCGCCCTGGGGACATACGAACCGCCTCCTTCCACCATTGTGCA
CTATGGGAGGCCGCTGCTGCGTGGAGCACTTAAAGTCCAGCCTCCAGGACCGGATGCCCCTCCTGTCTCCCGCTCCCATCGTGCCCTTAAATGCCAGATC
TGGTGGAGGGAAGAGAGAAGAGGTAGGAAGAAAGGTGATGAAAACTCCTGGTCATTCCTTGAATAAACTTGATTTTATTTAATAGAATAAAATGTATTTG
ATTTTGTAAGATA
  • BNIP1-7 (forward primer)
  • BNIP1-8 (reverse primer)
  • Single exon skipping

Frame 0

PAAARSRRPQHGGSPRRPRPDL*PRDCQI*PGG
EGAYSGYP*LFRTLKCSY*TEY*SKREISTVASQ
NTASSLSKGIYLDCFHIFF*ANLFPDRLFFNSA
*LQLSNYTCYLQ*PGAVG*RARQRIRETTSTPG
SGESQKADAQQSGLMEES*SHLQNCNRQSRESRT
SSGRRSLKAK
ENHQREPGPDIQYHH*EPHGDQQ
DDGPAGPAERGGHAVSSHFFTNDPGCK*RI*VH
VGHHPAGPEAYHKIQSPGADGQASHLPCASPVSC
YGPLYCEKAALSIFVRSQRCQFWPFQLLFQDLS
WFLSSRLLS*ATHPSVCTSCLQVGWNTVPHFSA
SSWLVKGEQSHGRKVWHWDAALGTYEPPPSTIVH
YGRPLLRGALKVQPPGPDAPPVSRSHRALKCQI
WWREERRGRKKGDENSWSFLE*T*FYLIE*NVF
DFVR

Frame 1

LPLPVAGVPNMAAPQDVHVRICNQEIVKFDLEV
KALIQDIRDCSGPLSALTELNTKVKEKFQQLRH
RIQPVLYQRAFIWTASTFFFKLTYSLTDFSSTQH
DFNSPTTPVTFSDLEQLAKEQDKESEKQLLLQE
VENHKKQMLSNQASWRKANLTCKIAIDNLEKAE
LLQGGDLLRQR
KTTKESLAQTSSTITESLMGISR
MMAQQVQQSEEAMQSLVTSSRTILDANEEFKSM
SGTIQLGRKLITKYNRRELTDKLLIFLALALFL
ATVLYIVKKRLFPFL*DPKGASSGPFSSCFRICP
GS*ALGC*AEPHTPPFAPVACRLDGTQCPTFLQ
VAGL*RVNRAMGGRSGIGMPPWGHTNRLLPPLC
TMGGRCCVEHLKSSLQDRMPLLSPAPIVPLNARS
GGGKREEVGRKVMKTPGHSLNKLDFI**NKMYL
IL*D

Frame 2

CRCP*PASPTWRLPKTSTSGSVTKRLSNLTWR*
RRLFRISVIVQDP*VLLLN*ILK*KRNFNSCVT
EYSQFSIKGHLFGLLPHFFLS*LIP*QTFLQLS
MTSTLQLHLLPSVTWSSWLKSKTKNQRNNFYSRK
WRITKSRCSAIRPHGGKLISPAKLQSTI*RKQN
FFREEIS*GK
GKPPKRAWPRHPVPSLRASWGSA
G*WPSRSSRARRPCSL*SLLHERSWMQMKNLSPC
RAPSSWAGSLSQNTIAGS*RTSFSSSLR*PCFL
LRSSIL*KSGSFHFCEIPKVPVLALSAPVSGSV
LVPEL*AAKLSHTPLRLHQLPAGWMEHSAPLFCK
*LACKG*TEPWEEGLALGCRPGDIRTASFHHCA
LWEAAAAWST*SPASRTGCPSCLPLPSCP*MPD
LVEGREKR*EER**KLLVIP*INLILFNRIKCI*
FCKI

Copyright ©2008,2017, all rights reserved.