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Supplementary data
Tumor microenvironment associated modifications of alternative splicing
Assay reliability
FF and FFPE match sample set
QPCR Relative Expression Quantification
: COL3A1_G_1_f COL3A1_G_r
QPCR Relative Expression Quantification (grouped)
: COL3A1_G_1_f COL3A1_G_r
QPCR Primer Pair Efficiency
: COL3A1_G_1_f COL3A1_G_r
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Assay Ct range in blue highlight |
QPCR Primer Pair Efficiency
: Systematic Outlier Filtering
0 technical replicates removed (absolute Ct threshold 0.5; MADZ 3.5)
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QPCR Amplification Data
: OVN 250 CM022675 A09
QPCR Amplification Data
: OVN 262 CM022676 A09
QPCR Amplification Data
: OVN 264 CM022677 A09
QPCR Amplification Data
: OVN 385 CM022678 A09
QPCR Amplification Data
: OVC 189 CM022679 A09
QPCR Amplification Data
: OVC 203 CM022680 A09
QPCR Amplification Data
: OVC 278 CM022681 A09
QPCR Amplification Data
: OVC 328 CM022682 A09
QPCR Amplification Data
: OVN 250;FF AMP CM022683 A09
QPCR Amplification Data
: OVN 262;FF AMP CM022684 A09
QPCR Amplification Data
: OVN 264;FF AMP CM022685 A09
QPCR Amplification Data
: OVN 385;FF AMP CM022686 A09
QPCR Amplification Data
: OVC 189;FF AMP CM022687 A09
QPCR Amplification Data
: OVC 203;FF AMP CM022688 A09
QPCR Amplification Data
: OVC 278;FF AMP CM022689 A09
QPCR Amplification Data
: OVC 328;FF AMP CM022690 A09
QPCR Amplification Data
: OVN 250 B;FFPE AMP CM024440 A09
QPCR Amplification Data
: OVN 262 B;FFPE AMP CM024438 A09
QPCR Amplification Data
: OVN 264 B;FFPE AMP CM024439 A09
QPCR Amplification Data
: OVN 385 B;FFPE AMP CM022884 A09
QPCR Amplification Data
: OVC 189 B;FFPE AMP CM021898 A09
QPCR Amplification Data
: OVC 203 B;FFPE AMP CM021899 A09
QPCR Amplification Data
: OVC 278 B;FFPE AMP CM021900 A09
QPCR Amplification Data
: OVC 328 B;FFPE AMP CM021901 A09
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