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Home Supplementary data Tumor microenvironment associated modifications of alternative splicing RBFOX2 and QKI dependent ASEs QKI responsiveness of 48 RBFOX2 dependent ASEs permalink
QKI responsiveness of 48 RBFOX2 dependent ASEs ⚙
Transcript map : GABRE JPB_SKOV_Ctrl Lipo_72h
Exon
Length: 117
Transcript: GABRE.aApr07
Exon
Length: 218
Transcript: GABRE.aApr07
Exon
Length: 68
Transcript: GABRE.aApr07
Exon
Length: 221
Transcript: GABRE.aApr07
Exon
Length: 83
Transcript: GABRE.aApr07
Exon
Length: 138
Transcript: GABRE.aApr07
Exon
Length: 153
Transcript: GABRE.aApr07
Exon
Length: 200
Transcript: GABRE.aApr07
Exon
Length: 1966
Transcript: GABRE.aApr07
Intron
Length: 4167
Transcript: GABRE.aApr07
Intron
Length: 448
Transcript: GABRE.aApr07
Intron
Length: 7025
Transcript: GABRE.aApr07
Intron
Length: 1057
Transcript: GABRE.aApr07
Intron
Length: 1306
Transcript: GABRE.aApr07
Intron
Length: 3978
Transcript: GABRE.aApr07
Intron
Length: 140
Transcript: GABRE.aApr07
Intron
Length: 283
Transcript: GABRE.aApr07
Reaction
Expected peak: 188
0M
FOX.GABRE.F1
FOX.GABRE.R1
Reaction
Expected peak: 188
0M
FOX.GABRE.F1
FOX.GABRE.R1
Reaction
Expected peak: 188
0M
FOX.GABRE.F1
FOX.GABRE.R1
Reaction
Expected peak: 188
0M
FOX.GABRE.F1
FOX.GABRE.R1
Exon
Length: 106
Transcript: GABRE.bApr07
Exon
Length: 178
Transcript: GABRE.bApr07
Exon
Length: 218
Transcript: GABRE.bApr07
Exon
Length: 68
Transcript: GABRE.bApr07
Exon
Length: 221
Transcript: GABRE.bApr07
Exon
Length: 83
Transcript: GABRE.bApr07
Exon
Length: 138
Transcript: GABRE.bApr07
Exon
Length: 153
Transcript: GABRE.bApr07
Exon
Length: 200
Transcript: GABRE.bApr07
Exon
Length: 1966
Transcript: GABRE.bApr07
Intron
Length: 3252
Transcript: GABRE.bApr07
Intron
Length: 737
Transcript: GABRE.bApr07
Intron
Length: 448
Transcript: GABRE.bApr07
Intron
Length: 7025
Transcript: GABRE.bApr07
Intron
Length: 1057
Transcript: GABRE.bApr07
Intron
Length: 1306
Transcript: GABRE.bApr07
Intron
Length: 3978
Transcript: GABRE.bApr07
Intron
Length: 140
Transcript: GABRE.bApr07
Intron
Length: 283
Transcript: GABRE.bApr07
Reaction
Expected peak: 366
13.8M
FOX.GABRE.F1
FOX.GABRE.R1
Reaction
Expected peak: 366
13.8M
FOX.GABRE.F1
FOX.GABRE.R1
Reaction
Expected peak: 366
13.8M
FOX.GABRE.F1
FOX.GABRE.R1
Reaction
Expected peak: 366
13.8M
FOX.GABRE.F1
FOX.GABRE.R1
Exon
Length: 106
Transcript: GABRE.cApr07
Exon
Length: 178
Transcript: GABRE.cApr07
Exon
Length: 218
Transcript: GABRE.cApr07
Exon
Length: 68
Transcript: GABRE.cApr07
Exon
Length: 35
Transcript: GABRE.cApr07
Exon
Length: 90
Transcript: GABRE.cApr07
Exon
Length: 83
Transcript: GABRE.cApr07
Exon
Length: 138
Transcript: GABRE.cApr07
Exon
Length: 153
Transcript: GABRE.cApr07
Exon
Length: 200
Transcript: GABRE.cApr07
Exon
Length: 1966
Transcript: GABRE.cApr07
Intron
Length: 3252
Transcript: GABRE.cApr07
Intron
Length: 737
Transcript: GABRE.cApr07
Intron
Length: 448
Transcript: GABRE.cApr07
Intron
Length: 7025
Transcript: GABRE.cApr07
Intron
Length: 96
Transcript: GABRE.cApr07
Intron
Length: 1057
Transcript: GABRE.cApr07
Intron
Length: 1306
Transcript: GABRE.cApr07
Intron
Length: 3978
Transcript: GABRE.cApr07
Intron
Length: 140
Transcript: GABRE.cApr07
Intron
Length: 283
Transcript: GABRE.cApr07
Reaction
Expected peak: 366
13.8M
FOX.GABRE.F1
FOX.GABRE.R1
Reaction
Expected peak: 366
13.8M
FOX.GABRE.F1
FOX.GABRE.R1
Reaction
Expected peak: 366
13.8M
FOX.GABRE.F1
FOX.GABRE.R1
Reaction
Expected peak: 366
13.8M
FOX.GABRE.F1
FOX.GABRE.R1
Exon
Length: 4016
Transcript: GABRE.dApr07
Exon
Length: 200
Transcript: GABRE.dApr07
Exon
Length: 1966
Transcript: GABRE.dApr07
Intron
Length: 140
Transcript: GABRE.dApr07
Intron
Length: 283
Transcript: GABRE.dApr07
Exon
Length: 434
Transcript: GABRE.eApr07
Exon
Length: 153
Transcript: GABRE.eApr07
Exon
Length: 200
Transcript: GABRE.eApr07
Exon
Length: 311
Transcript: GABRE.eApr07
Intron
Length: 176
Transcript: GABRE.eApr07
Intron
Length: 140
Transcript: GABRE.eApr07
Intron
Length: 283
Transcript: GABRE.eApr07
Exon
Length: 68
Transcript: GABRE.fApr07
Exon
Length: 221
Transcript: GABRE.fApr07
Exon
Length: 763
Transcript: GABRE.fApr07
Intron
Length: 7025
Transcript: GABRE.fApr07
Intron
Length: 1057
Transcript: GABRE.fApr07
Exon
Length: 584
Transcript: GABRE.gApr07-unspliced
Exon
Length: 170
Transcript: GABRE.hApr07
Exon
Length: 138
Transcript: GABRE.hApr07
Exon
Length: 468
Transcript: GABRE.hApr07
Exon
Length: 560
Transcript: GABRE.hApr07
Intron
Length: 2446
Transcript: GABRE.hApr07
Intron
Length: 689
Transcript: GABRE.hApr07
Intron
Length: 4997
Transcript: GABRE.hApr07
Exon
Length: 326
Transcript: GABRE.iApr07
Exon
Length: 153
Transcript: GABRE.iApr07
Exon
Length: 464
Transcript: GABRE.iApr07
Intron
Length: 1326
Transcript: GABRE.iApr07
Intron
Length: 140
Transcript: GABRE.iApr07
Exon
Length: 104
Transcript: GABRE.jApr07
Exon
Length: 211
Transcript: GABRE.jApr07
Exon
Length: 308
Transcript: GABRE.jApr07
Intron
Length: 140
Transcript: GABRE.jApr07
Intron
Length: 272
Transcript: GABRE.jApr07
Exon
Length: 2100
Transcript: GABRE.kApr07
Exon
Length: 1004
Transcript: GABRE.kApr07
Intron
Length: 737
Transcript: GABRE.kApr07
Exon
Length: 359
Transcript: GABRE.mApr07
Exon
Length: 338
Transcript: GABRE.mApr07
Intron
Length: 448
Transcript: GABRE.mApr07
Exon
Length: 101
Transcript: GABRE.nApr07
Exon
Length: 178
Transcript: GABRE.nApr07
Exon
Length: 346
Transcript: GABRE.nApr07
Intron
Length: 3252
Transcript: GABRE.nApr07
Intron
Length: 737
Transcript: GABRE.nApr07
Reaction
Expected peak: 366
13.8M
FOX.GABRE.F1
FOX.GABRE.R1
Reaction
Expected peak: 366
13.8M
FOX.GABRE.F1
FOX.GABRE.R1
Reaction
Expected peak: 366
13.8M
FOX.GABRE.F1
FOX.GABRE.R1
Reaction
Expected peak: 366
13.8M
FOX.GABRE.F1
FOX.GABRE.R1
FOX.GABRE.R1
ACTCTGCTCCCAGTCTCAGT
FOX.GABRE.F1
TCCAAAGTTCTTCCAGTCCTCC

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