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Supplementary data
Tumor microenvironment associated modifications of alternative splicing
RBFOX2 and QKI dependent ASEs
QKI responsiveness of 48 RBFOX2 dependent ASEs
delta-PSI Representation
: .
PSI Representation
: .
Peak ratio bar
: All ratio bars
Peak Ratio Data
: data sheet
Using Unexpected peak alignment in 7.50%, [90,1000], > 4.00 nM
Using Wallace-style peak matching with new calibration
Using Expected peaks based on target genes
Gene list
: Gene list
| Gene | Reactions | Links |
|---|---|---|
| ABI1 | 4 | NCBIGene 36.2 ABI1 |
| ADD3 | 4 | NCBIGene 36.2 ADD3 |
| APBB2 | 4 | AceView 36.Apr07 APBB2 |
| APP | 4 | AceView 35.4 APP, AceView 35.4 APP, UCSCKnownGene 2009-03-03 APP |
| ATP11C | 4 | NCBIGene 36.2 ATP11C |
| CA12 | 4 | NCBIGene 36.2 CA12 |
| CTTN | 4 | NCBIGene 36.2 CTTN |
| DCAMKL2 | 4 | AceView 36.Apr07 DCAMKL2 |
| DIAPH2andRPA4 | 4 | AceView 36.Apr07 DIAPH2andRPA4 |
| ECT2 | 4 | AceView 35.4 ECT2, AceView 35.4 ECT2 |
| EPB41L2 | 4 | AceView 36.Apr07 EPB41L2 |
| EXOC1 | 4 | AceView 36.Apr07 EXOC1 |
| FGFR1OP | 4 | NCBIGene 36.2 FGFR1OP |
| FMNL3 | 4 | AceView 36.Apr07 FMNL3 |
| FOXM1 | 4 | NCBIGene 36.2 FOXM1 |
| GAB1 | 4 | NCBIGene 36.2 GAB1 |
| GABRE | 4 | AceView 36.Apr07 GABRE, AceView 36.Apr07 GABRE |
| GIT2 | 4 | NCBIGene 36.2 GIT2 |
| GOLGA2 | 4 | AceView 36.Apr07 GOLGA2 |
| GPR126 | 4 | NCBIGene 36.2 GPR126 |
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