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Home Supplementary data Tumor microenvironment associated modifications of alternative splicing RBFOX2 and QKI dependent ASEs QKI responsiveness of 48 RBFOX2 dependent ASEs permalink
QKI responsiveness of 48 RBFOX2 dependent ASEs ⚙
Transcript map : EPB41L2 JPB_SKOV_Ctrl Lipo_72h
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Length: 1112
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Exon
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Exon
Length: 153
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Exon
Length: 98
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Exon
Length: 173
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Exon
Length: 173
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Exon
Length: 63
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Exon
Length: 147
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Exon
Length: 564
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Exon
Length: 123
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Exon
Length: 99
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Exon
Length: 81
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Exon
Length: 113
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Length: 1253
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Length: 676
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Length: 28395
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Length: 17741
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Length: 4280
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Length: 3284
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Length: 1383
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Length: 4371
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Length: 525
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Length: 3877
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Length: 5025
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Intron
Length: 4889
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Intron
Length: 1893
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Intron
Length: 7977
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Intron
Length: 1981
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Length: 1824
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Intron
Length: 1817
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Intron
Length: 5394
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Intron
Length: 17532
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Exon
Length: 507
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Length: 213
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Exon
Length: 105
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Exon
Length: 43
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Exon
Length: 76
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Exon
Length: 219
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Exon
Length: 88
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Exon
Length: 153
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Exon
Length: 98
Transcript: EPB41L2.bApr07
Exon
Length: 173
Transcript: EPB41L2.bApr07
Exon
Length: 173
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Exon
Length: 315
Transcript: EPB41L2.bApr07
Exon
Length: 123
Transcript: EPB41L2.bApr07
Exon
Length: 99
Transcript: EPB41L2.bApr07
Exon
Length: 81
Transcript: EPB41L2.bApr07
Exon
Length: 113
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Exon
Length: 1252
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Length: 676
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Length: 28395
Transcript: EPB41L2.bApr07
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Length: 17741
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Intron
Length: 4280
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Intron
Length: 3284
Transcript: EPB41L2.bApr07
Intron
Length: 1383
Transcript: EPB41L2.bApr07
Intron
Length: 4371
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Intron
Length: 525
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Intron
Length: 3877
Transcript: EPB41L2.bApr07
Intron
Length: 5025
Transcript: EPB41L2.bApr07
Intron
Length: 14969
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Intron
Length: 2230
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Intron
Length: 1824
Transcript: EPB41L2.bApr07
Intron
Length: 1817
Transcript: EPB41L2.bApr07
Intron
Length: 5394
Transcript: EPB41L2.bApr07
Intron
Length: 17532
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Exon
Length: 148
Transcript: EPB41L2.cApr07
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Length: 506
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Length: 213
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Exon
Length: 105
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Exon
Length: 43
Transcript: EPB41L2.cApr07
Exon
Length: 76
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Exon
Length: 219
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Exon
Length: 88
Transcript: EPB41L2.cApr07
Exon
Length: 153
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Exon
Length: 98
Transcript: EPB41L2.cApr07
Exon
Length: 173
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Exon
Length: 173
Transcript: EPB41L2.cApr07
Exon
Length: 123
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Exon
Length: 99
Transcript: EPB41L2.cApr07
Exon
Length: 81
Transcript: EPB41L2.cApr07
Exon
Length: 113
Transcript: EPB41L2.cApr07
Exon
Length: 1251
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Intron
Length: 44120
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Intron
Length: 676
Transcript: EPB41L2.cApr07
Intron
Length: 28395
Transcript: EPB41L2.cApr07
Intron
Length: 17741
Transcript: EPB41L2.cApr07
Intron
Length: 4280
Transcript: EPB41L2.cApr07
Intron
Length: 3284
Transcript: EPB41L2.cApr07
Intron
Length: 1383
Transcript: EPB41L2.cApr07
Intron
Length: 4371
Transcript: EPB41L2.cApr07
Intron
Length: 525
Transcript: EPB41L2.cApr07
Intron
Length: 3877
Transcript: EPB41L2.cApr07
Intron
Length: 5025
Transcript: EPB41L2.cApr07
Intron
Length: 17514
Transcript: EPB41L2.cApr07
Intron
Length: 1824
Transcript: EPB41L2.cApr07
Intron
Length: 1817
Transcript: EPB41L2.cApr07
Intron
Length: 5394
Transcript: EPB41L2.cApr07
Intron
Length: 17532
Transcript: EPB41L2.cApr07
Exon
Length: 167
Transcript: EPB41L2.dApr07
Exon
Length: 506
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Exon
Length: 213
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Exon
Length: 105
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Exon
Length: 43
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Exon
Length: 76
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Exon
Length: 219
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Exon
Length: 88
Transcript: EPB41L2.dApr07
Exon
Length: 153
Transcript: EPB41L2.dApr07
Exon
Length: 98
Transcript: EPB41L2.dApr07
Exon
Length: 173
Transcript: EPB41L2.dApr07
Exon
Length: 173
Transcript: EPB41L2.dApr07
Exon
Length: 81
Transcript: EPB41L2.dApr07
Exon
Length: 113
Transcript: EPB41L2.dApr07
Exon
Length: 1252
Transcript: EPB41L2.dApr07
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Length: 106655
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Intron
Length: 676
Transcript: EPB41L2.dApr07
Intron
Length: 28395
Transcript: EPB41L2.dApr07
Intron
Length: 17741
Transcript: EPB41L2.dApr07
Intron
Length: 4280
Transcript: EPB41L2.dApr07
Intron
Length: 3284
Transcript: EPB41L2.dApr07
Intron
Length: 1383
Transcript: EPB41L2.dApr07
Intron
Length: 4371
Transcript: EPB41L2.dApr07
Intron
Length: 525
Transcript: EPB41L2.dApr07
Intron
Length: 3877
Transcript: EPB41L2.dApr07
Intron
Length: 5025
Transcript: EPB41L2.dApr07
Intron
Length: 21377
Transcript: EPB41L2.dApr07
Intron
Length: 5394
Transcript: EPB41L2.dApr07
Intron
Length: 17532
Transcript: EPB41L2.dApr07
Exon
Length: 130
Transcript: EPB41L2.eApr07
Exon
Length: 173
Transcript: EPB41L2.eApr07
Exon
Length: 63
Transcript: EPB41L2.eApr07
Exon
Length: 147
Transcript: EPB41L2.eApr07
Exon
Length: 102
Transcript: EPB41L2.eApr07
Exon
Length: 54
Transcript: EPB41L2.eApr07
Exon
Length: 564
Transcript: EPB41L2.eApr07
Exon
Length: 102
Transcript: EPB41L2.eApr07
Exon
Length: 99
Transcript: EPB41L2.eApr07
Exon
Length: 81
Transcript: EPB41L2.eApr07
Exon
Length: 113
Transcript: EPB41L2.eApr07
Exon
Length: 496
Transcript: EPB41L2.eApr07
Intron
Length: 5025
Transcript: EPB41L2.eApr07
Intron
Length: 4889
Transcript: EPB41L2.eApr07
Intron
Length: 1893
Transcript: EPB41L2.eApr07
Intron
Length: 1328
Transcript: EPB41L2.eApr07
Intron
Length: 6292
Transcript: EPB41L2.eApr07
Intron
Length: 201
Transcript: EPB41L2.eApr07
Intron
Length: 2002
Transcript: EPB41L2.eApr07
Intron
Length: 1824
Transcript: EPB41L2.eApr07
Intron
Length: 1817
Transcript: EPB41L2.eApr07
Intron
Length: 5394
Transcript: EPB41L2.eApr07
Intron
Length: 17532
Transcript: EPB41L2.eApr07
Exon
Length: 1463
Transcript: EPB41L2.fApr07
Exon
Length: 36
Transcript: EPB41L2.fApr07
Exon
Length: 147
Transcript: EPB41L2.fApr07
Exon
Length: 564
Transcript: EPB41L2.fApr07
Exon
Length: 123
Transcript: EPB41L2.fApr07
Exon
Length: 99
Transcript: EPB41L2.fApr07
Exon
Length: 81
Transcript: EPB41L2.fApr07
Exon
Length: 113
Transcript: EPB41L2.fApr07
Exon
Length: 672
Transcript: EPB41L2.fApr07
Intron
Length: 111
Transcript: EPB41L2.fApr07
Intron
Length: 2203
Transcript: EPB41L2.fApr07
Intron
Length: 7977
Transcript: EPB41L2.fApr07
Intron
Length: 1981
Transcript: EPB41L2.fApr07
Intron
Length: 1824
Transcript: EPB41L2.fApr07
Intron
Length: 1817
Transcript: EPB41L2.fApr07
Intron
Length: 5394
Transcript: EPB41L2.fApr07
Intron
Length: 17532
Transcript: EPB41L2.fApr07
Reaction
Expected peak: 166
0M
FOX.EPB41L2.F1
FOX.EPB41L2.R1
Exon
Length: 91
Transcript: EPB41L2.gApr07
Exon
Length: 506
Transcript: EPB41L2.gApr07
Exon
Length: 213
Transcript: EPB41L2.gApr07
Exon
Length: 47
Transcript: EPB41L2.gApr07
Intron
Length: 13783
Transcript: EPB41L2.gApr07
Intron
Length: 676
Transcript: EPB41L2.gApr07
Intron
Length: 28395
Transcript: EPB41L2.gApr07
Exon
Length: 300
Transcript: EPB41L2.hApr07
Exon
Length: 36
Transcript: EPB41L2.hApr07
Exon
Length: 147
Transcript: EPB41L2.hApr07
Exon
Length: 168
Transcript: EPB41L2.hApr07
Exon
Length: 54
Transcript: EPB41L2.hApr07
Exon
Length: 123
Transcript: EPB41L2.hApr07
Exon
Length: 99
Transcript: EPB41L2.hApr07
Exon
Length: 81
Transcript: EPB41L2.hApr07
Exon
Length: 20
Transcript: EPB41L2.hApr07
Intron
Length: 111
Transcript: EPB41L2.hApr07
Intron
Length: 2203
Transcript: EPB41L2.hApr07
Intron
Length: 5565
Transcript: EPB41L2.hApr07
Intron
Length: 1989
Transcript: EPB41L2.hApr07
Intron
Length: 2746
Transcript: EPB41L2.hApr07
Intron
Length: 1824
Transcript: EPB41L2.hApr07
Intron
Length: 1817
Transcript: EPB41L2.hApr07
Intron
Length: 5394
Transcript: EPB41L2.hApr07
Reaction
Expected peak: 166
0M
FOX.EPB41L2.F1
FOX.EPB41L2.R1
Exon
Length: 72
Transcript: EPB41L2.iApr07
Exon
Length: 98
Transcript: EPB41L2.iApr07
Exon
Length: 173
Transcript: EPB41L2.iApr07
Exon
Length: 173
Transcript: EPB41L2.iApr07
Exon
Length: 383
Transcript: EPB41L2.iApr07
Intron
Length: 525
Transcript: EPB41L2.iApr07
Intron
Length: 3877
Transcript: EPB41L2.iApr07
Intron
Length: 5025
Transcript: EPB41L2.iApr07
Intron
Length: 19461
Transcript: EPB41L2.iApr07
Exon
Length: 142
Transcript: EPB41L2.jApr07
Exon
Length: 506
Transcript: EPB41L2.jApr07
Exon
Length: 123
Transcript: EPB41L2.jApr07
Intron
Length: 106642
Transcript: EPB41L2.jApr07
Intron
Length: 676
Transcript: EPB41L2.jApr07
Exon
Length: 2577
Transcript: EPB41L2.kApr07
Exon
Length: 36
Transcript: EPB41L2.kApr07
Exon
Length: 63
Transcript: EPB41L2.kApr07
Exon
Length: 147
Transcript: EPB41L2.kApr07
Exon
Length: 54
Transcript: EPB41L2.kApr07
Exon
Length: 123
Transcript: EPB41L2.kApr07
Exon
Length: 81
Transcript: EPB41L2.kApr07
Exon
Length: 113
Transcript: EPB41L2.kApr07
Exon
Length: 1249
Transcript: EPB41L2.kApr07
Intron
Length: 111
Transcript: EPB41L2.kApr07
Intron
Length: 247
Transcript: EPB41L2.kApr07
Intron
Length: 1893
Transcript: EPB41L2.kApr07
Intron
Length: 7722
Transcript: EPB41L2.kApr07
Intron
Length: 2746
Transcript: EPB41L2.kApr07
Intron
Length: 3740
Transcript: EPB41L2.kApr07
Intron
Length: 5394
Transcript: EPB41L2.kApr07
Intron
Length: 17532
Transcript: EPB41L2.kApr07
Reaction
Expected peak: 229
30M
FOX.EPB41L2.F1
FOX.EPB41L2.R1
Exon
Length: 34
Transcript: EPB41L2.lApr07
Exon
Length: 506
Transcript: EPB41L2.lApr07
Exon
Length: 45
Transcript: EPB41L2.lApr07
Intron
Length: 57062
Transcript: EPB41L2.lApr07
Intron
Length: 676
Transcript: EPB41L2.lApr07
Exon
Length: 135
Transcript: EPB41L2.mApr07
Exon
Length: 105
Transcript: EPB41L2.mApr07
Exon
Length: 43
Transcript: EPB41L2.mApr07
Exon
Length: 76
Transcript: EPB41L2.mApr07
Exon
Length: 219
Transcript: EPB41L2.mApr07
Exon
Length: 85
Transcript: EPB41L2.mApr07
Intron
Length: 43573
Transcript: EPB41L2.mApr07
Intron
Length: 17741
Transcript: EPB41L2.mApr07
Intron
Length: 4280
Transcript: EPB41L2.mApr07
Intron
Length: 3284
Transcript: EPB41L2.mApr07
Intron
Length: 1383
Transcript: EPB41L2.mApr07
Exon
Length: 55
Transcript: EPB41L2.nApr07
Exon
Length: 937
Transcript: EPB41L2.nApr07
Intron
Length: 90075
Transcript: EPB41L2.nApr07
Exon
Length: 1449
Transcript: EPB41L2.oApr07
Exon
Length: 99
Transcript: EPB41L2.oApr07
Exon
Length: 81
Transcript: EPB41L2.oApr07
Exon
Length: 113
Transcript: EPB41L2.oApr07
Exon
Length: 1248
Transcript: EPB41L2.oApr07
Intron
Length: 1824
Transcript: EPB41L2.oApr07
Intron
Length: 1817
Transcript: EPB41L2.oApr07
Intron
Length: 5394
Transcript: EPB41L2.oApr07
Intron
Length: 17532
Transcript: EPB41L2.oApr07
Exon
Length: 89
Transcript: EPB41L2.pApr07
Exon
Length: 502
Transcript: EPB41L2.pApr07
Intron
Length: 57603
Transcript: EPB41L2.pApr07
Exon
Length: 106
Transcript: EPB41L2.qApr07
Exon
Length: 63
Transcript: EPB41L2.qApr07
Exon
Length: 147
Transcript: EPB41L2.qApr07
Exon
Length: 88
Transcript: EPB41L2.qApr07
Exon
Length: 133
Transcript: EPB41L2.qApr07
Exon
Length: 123
Transcript: EPB41L2.qApr07
Exon
Length: 81
Transcript: EPB41L2.qApr07
Exon
Length: 113
Transcript: EPB41L2.qApr07
Exon
Length: 624
Transcript: EPB41L2.qApr07
Intron
Length: 4889
Transcript: EPB41L2.qApr07
Intron
Length: 1893
Transcript: EPB41L2.qApr07
Intron
Length: 7977
Transcript: EPB41L2.qApr07
Intron
Length: 94
Transcript: EPB41L2.qApr07
Intron
Length: 2230
Transcript: EPB41L2.qApr07
Intron
Length: 3740
Transcript: EPB41L2.qApr07
Intron
Length: 5394
Transcript: EPB41L2.qApr07
Intron
Length: 17532
Transcript: EPB41L2.qApr07
Exon
Length: 656
Transcript: EPB41L2.rApr07-unspliced
Exon
Length: 23
Transcript: EPB41L2.sApr07
Exon
Length: 53
Transcript: EPB41L2.sApr07
Exon
Length: 475
Transcript: EPB41L2.sApr07
Intron
Length: 485
Transcript: EPB41L2.sApr07
Intron
Length: 58781
Transcript: EPB41L2.sApr07
Exon
Length: 151
Transcript: EPB41L2.tApr07
Exon
Length: 36
Transcript: EPB41L2.tApr07
Exon
Length: 63
Transcript: EPB41L2.tApr07
Exon
Length: 147
Transcript: EPB41L2.tApr07
Exon
Length: 154
Transcript: EPB41L2.tApr07
Intron
Length: 111
Transcript: EPB41L2.tApr07
Intron
Length: 247
Transcript: EPB41L2.tApr07
Intron
Length: 1893
Transcript: EPB41L2.tApr07
Intron
Length: 7977
Transcript: EPB41L2.tApr07
Reaction
Expected peak: 229
30M
FOX.EPB41L2.F1
FOX.EPB41L2.R1
Exon
Length: 192
Transcript: EPB41L2.uApr07
Exon
Length: 396
Transcript: EPB41L2.uApr07
Intron
Length: 22105
Transcript: EPB41L2.uApr07
Exon
Length: 196
Transcript: EPB41L2.vaApr07
Exon
Length: 368
Transcript: EPB41L2.vaApr07
Intron
Length: 105880
Transcript: EPB41L2.vaApr07
Exon
Length: 1035
Transcript: EPB41L2.vbApr07
Exon
Length: 81
Transcript: EPB41L2.vbApr07
Exon
Length: 113
Transcript: EPB41L2.vbApr07
Exon
Length: 1249
Transcript: EPB41L2.vbApr07
Intron
Length: 1817
Transcript: EPB41L2.vbApr07
Intron
Length: 5394
Transcript: EPB41L2.vbApr07
Intron
Length: 17532
Transcript: EPB41L2.vbApr07
Exon
Length: 1448
Transcript: EPB41L2.vcApr07-unspliced
Exon
Length: 521
Transcript: EPB41L2.vdApr07
Exon
Length: 79
Transcript: EPB41L2.vdApr07
Intron
Length: 7977
Transcript: EPB41L2.vdApr07
Exon
Length: 1082
Transcript: EPB41L2.veApr07
Exon
Length: 24
Transcript: EPB41L2.veApr07
Exon
Length: 1249
Transcript: EPB41L2.veApr07
Intron
Length: 12318
Transcript: EPB41L2.veApr07
Intron
Length: 17532
Transcript: EPB41L2.veApr07
Exon
Length: 1487
Transcript: EPB41L2.vgApr07-unspliced
Exon
Length: 62
Transcript: EPB41L2.viApr07
Exon
Length: 427
Transcript: EPB41L2.viApr07
Intron
Length: 29870
Transcript: EPB41L2.viApr07
Exon
Length: 198
Transcript: EPB41L2.vjApr07
Exon
Length: 224
Transcript: EPB41L2.vjApr07
Intron
Length: 17532
Transcript: EPB41L2.vjApr07
FOX.EPB41L2.R1
AGGGACAGAGGTGTGATACGT
FOX.EPB41L2.F1
AGATGGAAGAAGAGGAAACGCA

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