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Supplementary data
Tumor microenvironment associated modifications of alternative splicing
Splicing factor knockdown
Impact on ASEs
RBFOX2 RBMX SF3A2 THOC4 (epithelial ASEs)
QPCR Primer Pair List
: primer pair list
| Gene | Forward | Reverse | |
|---|---|---|---|
| VIEW | CD47 | CD47_cass_L_f | CD47_cass_L_r |
| VIEW | CD47 | CD47_cass_S_f | CD47_cass_S_r |
| VIEW | EIF4G2 | EIF4G2_cass_L_f | EIF4G2_cass_L_r |
| VIEW | EIF4G2 | EIF4G2_cass_S_f | EIF4G2_cass_S_r |
| VIEW | GMEB1/GMEB1 | GMEB1_alt3_L_f | GMEB1_alt3_L_r |
| VIEW | GMEB1/GMEB1 | GMEB1_alt3_S_f | GMEB1_alt3_S_r |
| VIEW | IRF2BP2 | IRF2BP2_alt5_L_f | IRF2BP2_alt5_L_r |
| VIEW | IRF2BP2 | IRF2BP2_alt5_S_f | IRF2BP2_alt5_S_r |
| VIEW | KIAA1217 | KIAA1217_cass_L_f | KIAA1217_cass_L_r |
| VIEW | KIAA1217 | KIAA1217_cass_S_f | KIAA1217_cass_S_r |
| VIEW | TIAF1/MYO18A | MYO18A_cass_S_1_f | MYO18A_cass_L_1_r |
| VIEW | TIAF1/MYO18A | MYO18A_cass_S_f | MYO18A_cass_S_r |
| VIEW | NFAT5 | NFAT5_cass_L_f | NFAT5_cass_L_r |
| VIEW | NFAT5 | NFAT5_cass_S_f | NFAT5_cass_S_r |
| VIEW | QKI | QKI_long2_f | QKI_long2_r |
| VIEW | QKI | QKI_long3_f | QKI_long3_r |
| VIEW | TJP1 | TJP1_cass_L_f | TJP1_cass_S_r |
| VIEW | TJP1 | TJP1_cass_S_f | TJP1_cass_S_r |
| VIEW | GIGYF2 | TNRC15_cass_L_f | TNRC15_cass_L_r |
| VIEW | GIGYF2 | TNRC15_cass_S_f | TNRC15_cass_S_r |
current - show all
Page 1 of 1, records 1 to 20 of 20
QPCR Primer Pair List
: event list
| Short | Long | |
|---|---|---|
| VIEW | CD47_cass_S_f CD47_cass_S_r | CD47_cass_L_f CD47_cass_L_r |
| VIEW | EIF4G2_cass_S_f EIF4G2_cass_S_r | EIF4G2_cass_L_f EIF4G2_cass_L_r |
| VIEW | GMEB1_alt3_S_f GMEB1_alt3_S_r | GMEB1_alt3_L_f GMEB1_alt3_L_r |
| VIEW | IRF2BP2_alt5_S_f IRF2BP2_alt5_S_r | IRF2BP2_alt5_L_f IRF2BP2_alt5_L_r |
| VIEW | KIAA1217_cass_S_f KIAA1217_cass_S_r | KIAA1217_cass_L_f KIAA1217_cass_L_r |
| VIEW | MYO18A_cass_S_f MYO18A_cass_S_r | MYO18A_cass_S_1_f MYO18A_cass_L_1_r |
| VIEW | NFAT5_cass_S_f NFAT5_cass_S_r | NFAT5_cass_L_f NFAT5_cass_L_r |
| VIEW | QKI_long2_f QKI_long2_r | QKI_long3_f QKI_long3_r |
| VIEW | TJP1_cass_S_f TJP1_cass_S_r | TJP1_cass_L_f TJP1_cass_S_r |
| VIEW | TNRC15_cass_S_f TNRC15_cass_S_r | TNRC15_cass_L_f TNRC15_cass_L_r |
current - show all
Page 1 of 1, records 1 to 10 of 10
QPCR QPSI
QPCR Reference Gene Page
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