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Supplementary data
RBFOX2 enforces the mesenchymal splicing signature in normal and cancer tissues
4. CASita plate / epithelium and mesenchyme (fetal colon)
Transcript map
: F3 epithelium
Exon
Length: 264
Transcript: F3.aAug05
Length: 264
Transcript: F3.aAug05
Exon
Length: 112
Transcript: F3.aAug05
Length: 112
Transcript: F3.aAug05
Exon
Length: 200
Transcript: F3.aAug05
Length: 200
Transcript: F3.aAug05
Exon
Length: 179
Transcript: F3.aAug05
Length: 179
Transcript: F3.aAug05
Exon
Length: 160
Transcript: F3.aAug05
Length: 160
Transcript: F3.aAug05
Exon
Length: 2432
Transcript: F3.aAug05
Length: 2432
Transcript: F3.aAug05
Intron
Length: 1168
Transcript: F3.aAug05
Length: 1168
Transcript: F3.aAug05
Intron
Length: 4092
Transcript: F3.aAug05
Length: 4092
Transcript: F3.aAug05
Intron
Length: 2696
Transcript: F3.aAug05
Length: 2696
Transcript: F3.aAug05
Intron
Length: 609
Transcript: F3.aAug05
Length: 609
Transcript: F3.aAug05
Intron
Length: 1724
Transcript: F3.aAug05
Length: 1724
Transcript: F3.aAug05
Reaction
Expected peak: 430
37.7M
F3.F2
F3.R2
Expected peak: 430
37.7M
F3.F2
F3.R2
Reaction
Expected peak: 430
37.7M
F3.F2
F3.R2
Expected peak: 430
37.7M
F3.F2
F3.R2
Reaction
Expected peak: 430
37.7M
F3.F2
F3.R2
Expected peak: 430
37.7M
F3.F2
F3.R2
Reaction
Expected peak: 430
37.7M
F3.F2
F3.R2
Expected peak: 430
37.7M
F3.F2
F3.R2
Exon
Length: 249
Transcript: F3.bAug05
Length: 249
Transcript: F3.bAug05
Exon
Length: 112
Transcript: F3.bAug05
Length: 112
Transcript: F3.bAug05
Exon
Length: 200
Transcript: F3.bAug05
Length: 200
Transcript: F3.bAug05
Exon
Length: 179
Transcript: F3.bAug05
Length: 179
Transcript: F3.bAug05
Exon
Length: 1421
Transcript: F3.bAug05
Length: 1421
Transcript: F3.bAug05
Intron
Length: 1168
Transcript: F3.bAug05
Length: 1168
Transcript: F3.bAug05
Intron
Length: 4092
Transcript: F3.bAug05
Length: 4092
Transcript: F3.bAug05
Intron
Length: 2696
Transcript: F3.bAug05
Length: 2696
Transcript: F3.bAug05
Intron
Length: 2493
Transcript: F3.bAug05
Length: 2493
Transcript: F3.bAug05
Reaction
Expected peak: 270
8.3M
F3.F2
F3.R2
Expected peak: 270
8.3M
F3.F2
F3.R2
Reaction
Expected peak: 270
8.3M
F3.F2
F3.R2
Expected peak: 270
8.3M
F3.F2
F3.R2
Reaction
Expected peak: 270
8.3M
F3.F2
F3.R2
Expected peak: 270
8.3M
F3.F2
F3.R2
Reaction
Expected peak: 270
8.3M
F3.F2
F3.R2
Expected peak: 270
8.3M
F3.F2
F3.R2
Exon
Length: 1186
Transcript: F3.cAug05
Length: 1186
Transcript: F3.cAug05
Exon
Length: 112
Transcript: F3.cAug05
Length: 112
Transcript: F3.cAug05
Exon
Length: 200
Transcript: F3.cAug05
Length: 200
Transcript: F3.cAug05
Exon
Length: 272
Transcript: F3.cAug05
Length: 272
Transcript: F3.cAug05
Intron
Length: 203
Transcript: F3.cAug05
Length: 203
Transcript: F3.cAug05
Intron
Length: 4092
Transcript: F3.cAug05
Length: 4092
Transcript: F3.cAug05
Intron
Length: 2696
Transcript: F3.cAug05
Length: 2696
Transcript: F3.cAug05
Exon
Length: 220
Transcript: F3.dAug05
Length: 220
Transcript: F3.dAug05
Exon
Length: 663
Transcript: F3.dAug05
Length: 663
Transcript: F3.dAug05
Intron
Length: 1168
Transcript: F3.dAug05
Length: 1168
Transcript: F3.dAug05
Exon
Length: 223
Transcript: F3.eAug05
Length: 223
Transcript: F3.eAug05
Exon
Length: 495
Transcript: F3.eAug05
Length: 495
Transcript: F3.eAug05
Exon
Length: 15
Transcript: F3.eAug05
Length: 15
Transcript: F3.eAug05
Intron
Length: 470
Transcript: F3.eAug05
Length: 470
Transcript: F3.eAug05
Intron
Length: 203
Transcript: F3.eAug05
Length: 203
Transcript: F3.eAug05
Exon
Length: 84
Transcript: F3.fAug05
Length: 84
Transcript: F3.fAug05
Exon
Length: 312
Transcript: F3.fAug05
Length: 312
Transcript: F3.fAug05
Intron
Length: 4092
Transcript: F3.fAug05
Length: 4092
Transcript: F3.fAug05
Exon
Length: 595
Transcript: F3.shed1.aAug05
Length: 595
Transcript: F3.shed1.aAug05
Exon
Length: 534
Transcript: F3.shed2.aAug05
Length: 534
Transcript: F3.shed2.aAug05
F3.F2
CTCGGACAGCCAACAATTCA
CTCGGACAGCCAACAATTCA
F3.R2
CCACTCCTGCCTTTCTACACTT
CCACTCCTGCCTTTCTACACTT