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Supplementary data
RBFOX2 enforces the mesenchymal splicing signature in normal and cancer tissues
4. CASita plate / epithelium and mesenchyme (fetal colon)
Transcript map
: FANCA epithelium
- FANCA.F13 / FANCA.R13 (CM016809 E23) : Curve | Curve set
- FANCA.F13 / FANCA.R13 (CM016809 E23) : Curve | Curve set
- FANCA.F13 / FANCA.R13 (CM016809 E23) : Curve | Curve set
Exon
Length: 121
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Length: 121
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Exon
Length: 110
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Length: 110
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Exon
Length: 94
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Length: 94
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Exon
Length: 143
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Length: 143
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Exon
Length: 96
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Length: 96
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Exon
Length: 74
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Length: 74
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Exon
Length: 113
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Length: 113
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Exon
Length: 83
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Length: 83
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Exon
Length: 34
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Exon
Length: 67
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Exon
Length: 113
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Exon
Length: 77
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Exon
Length: 142
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Length: 142
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Exon
Length: 134
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Exon
Length: 111
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Length: 111
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Exon
Length: 96
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Length: 96
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Exon
Length: 60
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Exon
Length: 89
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Length: 89
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Exon
Length: 61
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Length: 61
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Exon
Length: 50
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Length: 50
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Exon
Length: 74
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Length: 74
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Exon
Length: 114
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Length: 114
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Exon
Length: 137
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Exon
Length: 71
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Length: 94
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Exon
Length: 188
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Length: 188
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Exon
Length: 97
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Length: 97
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Exon
Length: 177
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Length: 177
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Exon
Length: 74
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Length: 74
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Exon
Length: 129
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Length: 129
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Exon
Length: 85
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Length: 85
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Exon
Length: 173
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Length: 173
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Exon
Length: 109
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Length: 109
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Exon
Length: 60
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Length: 60
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Exon
Length: 105
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Length: 105
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Exon
Length: 113
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Length: 113
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Exon
Length: 139
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Length: 139
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Exon
Length: 63
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Length: 63
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Exon
Length: 106
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Length: 106
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Exon
Length: 76
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Length: 76
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Exon
Length: 157
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Length: 157
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Exon
Length: 93
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Length: 93
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Exon
Length: 1158
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Length: 1158
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Intron
Length: 550
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Length: 550
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Intron
Length: 1263
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Length: 1263
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Intron
Length: 3448
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Length: 3448
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Intron
Length: 126
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Length: 126
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Intron
Length: 2339
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Length: 2339
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Intron
Length: 2901
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Length: 2901
Transcript: FANCA.aAug05
Intron
Length: 1938
Transcript: FANCA.aAug05
Length: 1938
Transcript: FANCA.aAug05
Intron
Length: 3620
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Length: 3620
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Intron
Length: 372
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Length: 372
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Intron
Length: 3147
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Length: 3147
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Intron
Length: 3358
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Length: 3358
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Intron
Length: 402
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Length: 402
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Intron
Length: 390
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Length: 390
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Intron
Length: 6438
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Length: 6438
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Intron
Length: 1751
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Length: 1751
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Intron
Length: 88
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Length: 88
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Intron
Length: 2901
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Length: 2901
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Intron
Length: 865
Transcript: FANCA.aAug05
Length: 865
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Intron
Length: 92
Transcript: FANCA.aAug05
Length: 92
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Intron
Length: 2985
Transcript: FANCA.aAug05
Length: 2985
Transcript: FANCA.aAug05
Intron
Length: 2357
Transcript: FANCA.aAug05
Length: 2357
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Intron
Length: 1456
Transcript: FANCA.aAug05
Length: 1456
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Intron
Length: 1043
Transcript: FANCA.aAug05
Length: 1043
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Intron
Length: 304
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Length: 304
Transcript: FANCA.aAug05
Intron
Length: 141
Transcript: FANCA.aAug05
Length: 141
Transcript: FANCA.aAug05
Intron
Length: 2599
Transcript: FANCA.aAug05
Length: 2599
Transcript: FANCA.aAug05
Intron
Length: 2074
Transcript: FANCA.aAug05
Length: 2074
Transcript: FANCA.aAug05
Intron
Length: 2867
Transcript: FANCA.aAug05
Length: 2867
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Intron
Length: 3243
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Length: 3243
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Intron
Length: 6354
Transcript: FANCA.aAug05
Length: 6354
Transcript: FANCA.aAug05
Intron
Length: 2235
Transcript: FANCA.aAug05
Length: 2235
Transcript: FANCA.aAug05
Intron
Length: 962
Transcript: FANCA.aAug05
Length: 962
Transcript: FANCA.aAug05
Intron
Length: 1768
Transcript: FANCA.aAug05
Length: 1768
Transcript: FANCA.aAug05
Intron
Length: 142
Transcript: FANCA.aAug05
Length: 142
Transcript: FANCA.aAug05
Intron
Length: 1512
Transcript: FANCA.aAug05
Length: 1512
Transcript: FANCA.aAug05
Intron
Length: 2020
Transcript: FANCA.aAug05
Length: 2020
Transcript: FANCA.aAug05
Intron
Length: 1933
Transcript: FANCA.aAug05
Length: 1933
Transcript: FANCA.aAug05
Intron
Length: 704
Transcript: FANCA.aAug05
Length: 704
Transcript: FANCA.aAug05
Intron
Length: 440
Transcript: FANCA.aAug05
Length: 440
Transcript: FANCA.aAug05
Intron
Length: 188
Transcript: FANCA.aAug05
Length: 188
Transcript: FANCA.aAug05
Intron
Length: 158
Transcript: FANCA.aAug05
Length: 158
Transcript: FANCA.aAug05
Intron
Length: 173
Transcript: FANCA.aAug05
Length: 173
Transcript: FANCA.aAug05
Reaction
Expected peak: 231
35.3M
FANCA.F13
FANCA.R13
Expected peak: 231
35.3M
FANCA.F13
FANCA.R13
Reaction
Expected peak: 231
35.3M
FANCA.F13
FANCA.R13
Expected peak: 231
35.3M
FANCA.F13
FANCA.R13
Reaction
Expected peak: 231
35.3M
FANCA.F13
FANCA.R13
Expected peak: 231
35.3M
FANCA.F13
FANCA.R13
Reaction
Expected peak: 231
35.3M
FANCA.F13
FANCA.R13
Expected peak: 231
35.3M
FANCA.F13
FANCA.R13
Reaction
Expected peak: 231
35.3M
FANCA.F13
FANCA.R13
Expected peak: 231
35.3M
FANCA.F13
FANCA.R13
Reaction
Expected peak: 231
35.3M
FANCA.F13
FANCA.R13
Expected peak: 231
35.3M
FANCA.F13
FANCA.R13
Reaction
Expected peak: 231
35.3M
FANCA.F13
FANCA.R13
Expected peak: 231
35.3M
FANCA.F13
FANCA.R13
Reaction
Expected peak: 231
35.3M
FANCA.F13
FANCA.R13
Expected peak: 231
35.3M
FANCA.F13
FANCA.R13
Reaction
Expected peak: 231
35.3M
FANCA.F13
FANCA.R13
Expected peak: 231
35.3M
FANCA.F13
FANCA.R13
Exon
Length: 48
Transcript: FANCA.bAug05
Length: 48
Transcript: FANCA.bAug05
Exon
Length: 177
Transcript: FANCA.bAug05
Length: 177
Transcript: FANCA.bAug05
Exon
Length: 74
Transcript: FANCA.bAug05
Length: 74
Transcript: FANCA.bAug05
Exon
Length: 85
Transcript: FANCA.bAug05
Length: 85
Transcript: FANCA.bAug05
Exon
Length: 173
Transcript: FANCA.bAug05
Length: 173
Transcript: FANCA.bAug05
Exon
Length: 109
Transcript: FANCA.bAug05
Length: 109
Transcript: FANCA.bAug05
Exon
Length: 60
Transcript: FANCA.bAug05
Length: 60
Transcript: FANCA.bAug05
Exon
Length: 105
Transcript: FANCA.bAug05
Length: 105
Transcript: FANCA.bAug05
Exon
Length: 113
Transcript: FANCA.bAug05
Length: 113
Transcript: FANCA.bAug05
Exon
Length: 139
Transcript: FANCA.bAug05
Length: 139
Transcript: FANCA.bAug05
Exon
Length: 63
Transcript: FANCA.bAug05
Length: 63
Transcript: FANCA.bAug05
Exon
Length: 106
Transcript: FANCA.bAug05
Length: 106
Transcript: FANCA.bAug05
Exon
Length: 76
Transcript: FANCA.bAug05
Length: 76
Transcript: FANCA.bAug05
Exon
Length: 161
Transcript: FANCA.bAug05
Length: 161
Transcript: FANCA.bAug05
Exon
Length: 93
Transcript: FANCA.bAug05
Length: 93
Transcript: FANCA.bAug05
Exon
Length: 186
Transcript: FANCA.bAug05
Length: 186
Transcript: FANCA.bAug05
Intron
Length: 2074
Transcript: FANCA.bAug05
Length: 2074
Transcript: FANCA.bAug05
Intron
Length: 2867
Transcript: FANCA.bAug05
Length: 2867
Transcript: FANCA.bAug05
Intron
Length: 9726
Transcript: FANCA.bAug05
Length: 9726
Transcript: FANCA.bAug05
Intron
Length: 2235
Transcript: FANCA.bAug05
Length: 2235
Transcript: FANCA.bAug05
Intron
Length: 962
Transcript: FANCA.bAug05
Length: 962
Transcript: FANCA.bAug05
Intron
Length: 1768
Transcript: FANCA.bAug05
Length: 1768
Transcript: FANCA.bAug05
Intron
Length: 142
Transcript: FANCA.bAug05
Length: 142
Transcript: FANCA.bAug05
Intron
Length: 1512
Transcript: FANCA.bAug05
Length: 1512
Transcript: FANCA.bAug05
Intron
Length: 2020
Transcript: FANCA.bAug05
Length: 2020
Transcript: FANCA.bAug05
Intron
Length: 1933
Transcript: FANCA.bAug05
Length: 1933
Transcript: FANCA.bAug05
Intron
Length: 704
Transcript: FANCA.bAug05
Length: 704
Transcript: FANCA.bAug05
Intron
Length: 440
Transcript: FANCA.bAug05
Length: 440
Transcript: FANCA.bAug05
Intron
Length: 188
Transcript: FANCA.bAug05
Length: 188
Transcript: FANCA.bAug05
Intron
Length: 154
Transcript: FANCA.bAug05
Length: 154
Transcript: FANCA.bAug05
Intron
Length: 173
Transcript: FANCA.bAug05
Length: 173
Transcript: FANCA.bAug05
Reaction
Expected peak: 102
19.2M
FANCA.F13
FANCA.R13
Expected peak: 102
19.2M
FANCA.F13
FANCA.R13
Reaction
Expected peak: 102
19.2M
FANCA.F13
FANCA.R13
Expected peak: 102
19.2M
FANCA.F13
FANCA.R13
Reaction
Expected peak: 102
19.2M
FANCA.F13
FANCA.R13
Expected peak: 102
19.2M
FANCA.F13
FANCA.R13
Reaction
Expected peak: 102
19.2M
FANCA.F13
FANCA.R13
Expected peak: 102
19.2M
FANCA.F13
FANCA.R13
Reaction
Expected peak: 102
19.2M
FANCA.F13
FANCA.R13
Expected peak: 102
19.2M
FANCA.F13
FANCA.R13
Reaction
Expected peak: 102
19.2M
FANCA.F13
FANCA.R13
Expected peak: 102
19.2M
FANCA.F13
FANCA.R13
Reaction
Expected peak: 102
19.2M
FANCA.F13
FANCA.R13
Expected peak: 102
19.2M
FANCA.F13
FANCA.R13
Reaction
Expected peak: 102
19.2M
FANCA.F13
FANCA.R13
Expected peak: 102
19.2M
FANCA.F13
FANCA.R13
Reaction
Expected peak: 102
19.2M
FANCA.F13
FANCA.R13
Expected peak: 102
19.2M
FANCA.F13
FANCA.R13
Exon
Length: 99
Transcript: FANCA.cAug05
Length: 99
Transcript: FANCA.cAug05
Exon
Length: 110
Transcript: FANCA.cAug05
Length: 110
Transcript: FANCA.cAug05
Exon
Length: 94
Transcript: FANCA.cAug05
Length: 94
Transcript: FANCA.cAug05
Exon
Length: 143
Transcript: FANCA.cAug05
Length: 143
Transcript: FANCA.cAug05
Exon
Length: 96
Transcript: FANCA.cAug05
Length: 96
Transcript: FANCA.cAug05
Exon
Length: 74
Transcript: FANCA.cAug05
Length: 74
Transcript: FANCA.cAug05
Exon
Length: 113
Transcript: FANCA.cAug05
Length: 113
Transcript: FANCA.cAug05
Exon
Length: 83
Transcript: FANCA.cAug05
Length: 83
Transcript: FANCA.cAug05
Exon
Length: 34
Transcript: FANCA.cAug05
Length: 34
Transcript: FANCA.cAug05
Exon
Length: 848
Transcript: FANCA.cAug05
Length: 848
Transcript: FANCA.cAug05
Intron
Length: 550
Transcript: FANCA.cAug05
Length: 550
Transcript: FANCA.cAug05
Intron
Length: 1263
Transcript: FANCA.cAug05
Length: 1263
Transcript: FANCA.cAug05
Intron
Length: 3448
Transcript: FANCA.cAug05
Length: 3448
Transcript: FANCA.cAug05
Intron
Length: 126
Transcript: FANCA.cAug05
Length: 126
Transcript: FANCA.cAug05
Intron
Length: 2339
Transcript: FANCA.cAug05
Length: 2339
Transcript: FANCA.cAug05
Intron
Length: 2901
Transcript: FANCA.cAug05
Length: 2901
Transcript: FANCA.cAug05
Intron
Length: 1938
Transcript: FANCA.cAug05
Length: 1938
Transcript: FANCA.cAug05
Intron
Length: 3620
Transcript: FANCA.cAug05
Length: 3620
Transcript: FANCA.cAug05
Intron
Length: 372
Transcript: FANCA.cAug05
Length: 372
Transcript: FANCA.cAug05
Exon
Length: 121
Transcript: FANCA.dAug05
Length: 121
Transcript: FANCA.dAug05
Exon
Length: 110
Transcript: FANCA.dAug05
Length: 110
Transcript: FANCA.dAug05
Exon
Length: 94
Transcript: FANCA.dAug05
Length: 94
Transcript: FANCA.dAug05
Exon
Length: 143
Transcript: FANCA.dAug05
Length: 143
Transcript: FANCA.dAug05
Exon
Length: 96
Transcript: FANCA.dAug05
Length: 96
Transcript: FANCA.dAug05
Exon
Length: 74
Transcript: FANCA.dAug05
Length: 74
Transcript: FANCA.dAug05
Exon
Length: 113
Transcript: FANCA.dAug05
Length: 113
Transcript: FANCA.dAug05
Exon
Length: 83
Transcript: FANCA.dAug05
Length: 83
Transcript: FANCA.dAug05
Exon
Length: 34
Transcript: FANCA.dAug05
Length: 34
Transcript: FANCA.dAug05
Exon
Length: 67
Transcript: FANCA.dAug05
Length: 67
Transcript: FANCA.dAug05
Exon
Length: 721
Transcript: FANCA.dAug05
Length: 721
Transcript: FANCA.dAug05
Intron
Length: 550
Transcript: FANCA.dAug05
Length: 550
Transcript: FANCA.dAug05
Intron
Length: 1263
Transcript: FANCA.dAug05
Length: 1263
Transcript: FANCA.dAug05
Intron
Length: 3448
Transcript: FANCA.dAug05
Length: 3448
Transcript: FANCA.dAug05
Intron
Length: 126
Transcript: FANCA.dAug05
Length: 126
Transcript: FANCA.dAug05
Intron
Length: 2339
Transcript: FANCA.dAug05
Length: 2339
Transcript: FANCA.dAug05
Intron
Length: 2901
Transcript: FANCA.dAug05
Length: 2901
Transcript: FANCA.dAug05
Intron
Length: 1938
Transcript: FANCA.dAug05
Length: 1938
Transcript: FANCA.dAug05
Intron
Length: 3620
Transcript: FANCA.dAug05
Length: 3620
Transcript: FANCA.dAug05
Intron
Length: 372
Transcript: FANCA.dAug05
Length: 372
Transcript: FANCA.dAug05
Intron
Length: 86
Transcript: FANCA.dAug05
Length: 86
Transcript: FANCA.dAug05
Exon
Length: 176
Transcript: FANCA.eAug05
Length: 176
Transcript: FANCA.eAug05
Exon
Length: 97
Transcript: FANCA.eAug05
Length: 97
Transcript: FANCA.eAug05
Exon
Length: 177
Transcript: FANCA.eAug05
Length: 177
Transcript: FANCA.eAug05
Exon
Length: 74
Transcript: FANCA.eAug05
Length: 74
Transcript: FANCA.eAug05
Exon
Length: 129
Transcript: FANCA.eAug05
Length: 129
Transcript: FANCA.eAug05
Exon
Length: 173
Transcript: FANCA.eAug05
Length: 173
Transcript: FANCA.eAug05
Exon
Length: 109
Transcript: FANCA.eAug05
Length: 109
Transcript: FANCA.eAug05
Exon
Length: 60
Transcript: FANCA.eAug05
Length: 60
Transcript: FANCA.eAug05
Exon
Length: 105
Transcript: FANCA.eAug05
Length: 105
Transcript: FANCA.eAug05
Exon
Length: 385
Transcript: FANCA.eAug05
Length: 385
Transcript: FANCA.eAug05
Intron
Length: 2599
Transcript: FANCA.eAug05
Length: 2599
Transcript: FANCA.eAug05
Intron
Length: 2074
Transcript: FANCA.eAug05
Length: 2074
Transcript: FANCA.eAug05
Intron
Length: 2867
Transcript: FANCA.eAug05
Length: 2867
Transcript: FANCA.eAug05
Intron
Length: 3243
Transcript: FANCA.eAug05
Length: 3243
Transcript: FANCA.eAug05
Intron
Length: 8674
Transcript: FANCA.eAug05
Length: 8674
Transcript: FANCA.eAug05
Intron
Length: 962
Transcript: FANCA.eAug05
Length: 962
Transcript: FANCA.eAug05
Intron
Length: 1768
Transcript: FANCA.eAug05
Length: 1768
Transcript: FANCA.eAug05
Intron
Length: 142
Transcript: FANCA.eAug05
Length: 142
Transcript: FANCA.eAug05
Intron
Length: 1512
Transcript: FANCA.eAug05
Length: 1512
Transcript: FANCA.eAug05
Exon
Length: 53
Transcript: FANCA.fAug05
Length: 53
Transcript: FANCA.fAug05
Exon
Length: 113
Transcript: FANCA.fAug05
Length: 113
Transcript: FANCA.fAug05
Exon
Length: 63
Transcript: FANCA.fAug05
Length: 63
Transcript: FANCA.fAug05
Exon
Length: 106
Transcript: FANCA.fAug05
Length: 106
Transcript: FANCA.fAug05
Exon
Length: 76
Transcript: FANCA.fAug05
Length: 76
Transcript: FANCA.fAug05
Exon
Length: 157
Transcript: FANCA.fAug05
Length: 157
Transcript: FANCA.fAug05
Exon
Length: 93
Transcript: FANCA.fAug05
Length: 93
Transcript: FANCA.fAug05
Exon
Length: 168
Transcript: FANCA.fAug05
Length: 168
Transcript: FANCA.fAug05
Intron
Length: 1512
Transcript: FANCA.fAug05
Length: 1512
Transcript: FANCA.fAug05
Intron
Length: 4092
Transcript: FANCA.fAug05
Length: 4092
Transcript: FANCA.fAug05
Intron
Length: 704
Transcript: FANCA.fAug05
Length: 704
Transcript: FANCA.fAug05
Intron
Length: 440
Transcript: FANCA.fAug05
Length: 440
Transcript: FANCA.fAug05
Intron
Length: 188
Transcript: FANCA.fAug05
Length: 188
Transcript: FANCA.fAug05
Intron
Length: 158
Transcript: FANCA.fAug05
Length: 158
Transcript: FANCA.fAug05
Intron
Length: 173
Transcript: FANCA.fAug05
Length: 173
Transcript: FANCA.fAug05
Exon
Length: 104
Transcript: FANCA.gAug05
Length: 104
Transcript: FANCA.gAug05
Exon
Length: 139
Transcript: FANCA.gAug05
Length: 139
Transcript: FANCA.gAug05
Exon
Length: 63
Transcript: FANCA.gAug05
Length: 63
Transcript: FANCA.gAug05
Exon
Length: 106
Transcript: FANCA.gAug05
Length: 106
Transcript: FANCA.gAug05
Exon
Length: 129
Transcript: FANCA.gAug05
Length: 129
Transcript: FANCA.gAug05
Exon
Length: 93
Transcript: FANCA.gAug05
Length: 93
Transcript: FANCA.gAug05
Exon
Length: 134
Transcript: FANCA.gAug05
Length: 134
Transcript: FANCA.gAug05
Intron
Length: 2020
Transcript: FANCA.gAug05
Length: 2020
Transcript: FANCA.gAug05
Intron
Length: 1933
Transcript: FANCA.gAug05
Length: 1933
Transcript: FANCA.gAug05
Intron
Length: 704
Transcript: FANCA.gAug05
Length: 704
Transcript: FANCA.gAug05
Intron
Length: 727
Transcript: FANCA.gAug05
Length: 727
Transcript: FANCA.gAug05
Intron
Length: 163
Transcript: FANCA.gAug05
Length: 163
Transcript: FANCA.gAug05
Intron
Length: 173
Transcript: FANCA.gAug05
Length: 173
Transcript: FANCA.gAug05
Exon
Length: 50
Transcript: FANCA.hAug05
Length: 50
Transcript: FANCA.hAug05
Exon
Length: 63
Transcript: FANCA.hAug05
Length: 63
Transcript: FANCA.hAug05
Exon
Length: 698
Transcript: FANCA.hAug05
Length: 698
Transcript: FANCA.hAug05
Intron
Length: 4092
Transcript: FANCA.hAug05
Length: 4092
Transcript: FANCA.hAug05
Intron
Length: 704
Transcript: FANCA.hAug05
Length: 704
Transcript: FANCA.hAug05
Exon
Length: 89
Transcript: FANCA.iAug05
Length: 89
Transcript: FANCA.iAug05
Exon
Length: 61
Transcript: FANCA.iAug05
Length: 61
Transcript: FANCA.iAug05
Exon
Length: 50
Transcript: FANCA.iAug05
Length: 50
Transcript: FANCA.iAug05
Exon
Length: 122
Transcript: FANCA.iAug05
Length: 122
Transcript: FANCA.iAug05
Exon
Length: 74
Transcript: FANCA.iAug05
Length: 74
Transcript: FANCA.iAug05
Exon
Length: 65
Transcript: FANCA.iAug05
Length: 65
Transcript: FANCA.iAug05
Intron
Length: 865
Transcript: FANCA.iAug05
Length: 865
Transcript: FANCA.iAug05
Intron
Length: 92
Transcript: FANCA.iAug05
Length: 92
Transcript: FANCA.iAug05
Intron
Length: 338
Transcript: FANCA.iAug05
Length: 338
Transcript: FANCA.iAug05
Intron
Length: 2525
Transcript: FANCA.iAug05
Length: 2525
Transcript: FANCA.iAug05
Intron
Length: 2357
Transcript: FANCA.iAug05
Length: 2357
Transcript: FANCA.iAug05
Exon
Length: 732
Transcript: FANCA.shed1.aAug05
Length: 732
Transcript: FANCA.shed1.aAug05
Exon
Length: 525
Transcript: FANCA.shed2.aAug05
Length: 525
Transcript: FANCA.shed2.aAug05
Exon
Length: 385
Transcript: FANCA.shed3.aAug05
Length: 385
Transcript: FANCA.shed3.aAug05
Exon
Length: 617
Transcript: FANCA.shed4.aAug05
Length: 617
Transcript: FANCA.shed4.aAug05
Exon
Length: 244
Transcript: FANCA.shed5.aAug05
Length: 244
Transcript: FANCA.shed5.aAug05
FANCA.F13
AACCTGAAGCTGATGCTCTTTC
AACCTGAAGCTGATGCTCTTTC
FANCA.R13
TATCCTCATTTCCTGTGCGG
TATCCTCATTTCCTGTGCGG