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Supplementary data
RBFOX2 enforces the mesenchymal splicing signature in normal and cancer tissues
1. Initial RefSeq screen / epithelium and mesenchyme (fetal colon)
Transcript map
: ACSL3 epithelium
Exon
Length: 245
Transcript: NM_004457
Length: 245
Transcript: NM_004457
Exon
Length: 59
Transcript: NM_004457
Length: 59
Transcript: NM_004457
Exon
Length: 107
Transcript: NM_004457
Length: 107
Transcript: NM_004457
Exon
Length: 418
Transcript: NM_004457
Length: 418
Transcript: NM_004457
Exon
Length: 178
Transcript: NM_004457
Length: 178
Transcript: NM_004457
Exon
Length: 110
Transcript: NM_004457
Length: 110
Transcript: NM_004457
Exon
Length: 139
Transcript: NM_004457
Length: 139
Transcript: NM_004457
Exon
Length: 151
Transcript: NM_004457
Length: 151
Transcript: NM_004457
Exon
Length: 124
Transcript: NM_004457
Length: 124
Transcript: NM_004457
Exon
Length: 72
Transcript: NM_004457
Length: 72
Transcript: NM_004457
Exon
Length: 140
Transcript: NM_004457
Length: 140
Transcript: NM_004457
Exon
Length: 173
Transcript: NM_004457
Length: 173
Transcript: NM_004457
Exon
Length: 75
Transcript: NM_004457
Length: 75
Transcript: NM_004457
Exon
Length: 192
Transcript: NM_004457
Length: 192
Transcript: NM_004457
Exon
Length: 115
Transcript: NM_004457
Length: 115
Transcript: NM_004457
Exon
Length: 158
Transcript: NM_004457
Length: 158
Transcript: NM_004457
Exon
Length: 1905
Transcript: NM_004457
Length: 1905
Transcript: NM_004457
Intron
Length: 26571
Transcript: NM_004457
Length: 26571
Transcript: NM_004457
Intron
Length: 12785
Transcript: NM_004457
Length: 12785
Transcript: NM_004457
Intron
Length: 7952
Transcript: NM_004457
Length: 7952
Transcript: NM_004457
Intron
Length: 7168
Transcript: NM_004457
Length: 7168
Transcript: NM_004457
Intron
Length: 1549
Transcript: NM_004457
Length: 1549
Transcript: NM_004457
Intron
Length: 908
Transcript: NM_004457
Length: 908
Transcript: NM_004457
Intron
Length: 2077
Transcript: NM_004457
Length: 2077
Transcript: NM_004457
Intron
Length: 1277
Transcript: NM_004457
Length: 1277
Transcript: NM_004457
Intron
Length: 246
Transcript: NM_004457
Length: 246
Transcript: NM_004457
Intron
Length: 1306
Transcript: NM_004457
Length: 1306
Transcript: NM_004457
Intron
Length: 2421
Transcript: NM_004457
Length: 2421
Transcript: NM_004457
Intron
Length: 1672
Transcript: NM_004457
Length: 1672
Transcript: NM_004457
Intron
Length: 1684
Transcript: NM_004457
Length: 1684
Transcript: NM_004457
Intron
Length: 2353
Transcript: NM_004457
Length: 2353
Transcript: NM_004457
Intron
Length: 1249
Transcript: NM_004457
Length: 1249
Transcript: NM_004457
Intron
Length: 6809
Transcript: NM_004457
Length: 6809
Transcript: NM_004457
Reaction
Expected peak: 356
1.5M
refseq_ACSL3.F1
refseq_ACSL3.R1
Expected peak: 356
1.5M
refseq_ACSL3.F1
refseq_ACSL3.R1
Exon
Length: 245
Transcript: NM_203372
Length: 245
Transcript: NM_203372
Exon
Length: 59
Transcript: NM_203372
Length: 59
Transcript: NM_203372
Exon
Length: 418
Transcript: NM_203372
Length: 418
Transcript: NM_203372
Exon
Length: 178
Transcript: NM_203372
Length: 178
Transcript: NM_203372
Exon
Length: 110
Transcript: NM_203372
Length: 110
Transcript: NM_203372
Exon
Length: 139
Transcript: NM_203372
Length: 139
Transcript: NM_203372
Exon
Length: 151
Transcript: NM_203372
Length: 151
Transcript: NM_203372
Exon
Length: 124
Transcript: NM_203372
Length: 124
Transcript: NM_203372
Exon
Length: 72
Transcript: NM_203372
Length: 72
Transcript: NM_203372
Exon
Length: 140
Transcript: NM_203372
Length: 140
Transcript: NM_203372
Exon
Length: 173
Transcript: NM_203372
Length: 173
Transcript: NM_203372
Exon
Length: 75
Transcript: NM_203372
Length: 75
Transcript: NM_203372
Exon
Length: 192
Transcript: NM_203372
Length: 192
Transcript: NM_203372
Exon
Length: 115
Transcript: NM_203372
Length: 115
Transcript: NM_203372
Exon
Length: 158
Transcript: NM_203372
Length: 158
Transcript: NM_203372
Exon
Length: 1905
Transcript: NM_203372
Length: 1905
Transcript: NM_203372
Intron
Length: 26571
Transcript: NM_203372
Length: 26571
Transcript: NM_203372
Intron
Length: 20844
Transcript: NM_203372
Length: 20844
Transcript: NM_203372
Intron
Length: 7168
Transcript: NM_203372
Length: 7168
Transcript: NM_203372
Intron
Length: 1549
Transcript: NM_203372
Length: 1549
Transcript: NM_203372
Intron
Length: 908
Transcript: NM_203372
Length: 908
Transcript: NM_203372
Intron
Length: 2077
Transcript: NM_203372
Length: 2077
Transcript: NM_203372
Intron
Length: 1277
Transcript: NM_203372
Length: 1277
Transcript: NM_203372
Intron
Length: 246
Transcript: NM_203372
Length: 246
Transcript: NM_203372
Intron
Length: 1306
Transcript: NM_203372
Length: 1306
Transcript: NM_203372
Intron
Length: 2421
Transcript: NM_203372
Length: 2421
Transcript: NM_203372
Intron
Length: 1672
Transcript: NM_203372
Length: 1672
Transcript: NM_203372
Intron
Length: 1684
Transcript: NM_203372
Length: 1684
Transcript: NM_203372
Intron
Length: 2353
Transcript: NM_203372
Length: 2353
Transcript: NM_203372
Intron
Length: 1249
Transcript: NM_203372
Length: 1249
Transcript: NM_203372
Intron
Length: 6809
Transcript: NM_203372
Length: 6809
Transcript: NM_203372
Reaction
Expected peak: 249
20.9M
refseq_ACSL3.F1
refseq_ACSL3.R1
Expected peak: 249
20.9M
refseq_ACSL3.F1
refseq_ACSL3.R1
refseq_ACSL3.F1
AGCACCTAGTACCTCCTACCATTG
AGCACCTAGTACCTCCTACCATTG
refseq_ACSL3.R1
CAGGCTTTGCTTTAATTCGG
CAGGCTTTGCTTTAATTCGG