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Home Supplementary data Tumor microenvironment associated modifications of alternative splicing RefSeq ASE screen Epithelial ASE markers global expression permalink
Epithelial ASE markers global expression ⚙
Reference Genes : primer pair list
Gene Forward Reverse
VIEW AHNAK AHNAK_G_f AHNAK_G_r
VIEW AKT1 AKT1_G_f AKT1_global_r
VIEW B2M B2M_G_3_f B2M_G_3_r
VIEW BMP1 BMP1_G_1_f BMP1_G_1_r
VIEW BMP7 BMP7_G_f BMP7_G_r
VIEW CAMK2N1 CAMK2N1_G_f CAMK2N1_G_r
VIEW CD47 CD47_G_f CD47_G_r
VIEW CDH1 CDH1_G_f CDH1_G_r
VIEW CDH2 CDH2_G_f CDH2_G_r
VIEW COL1A2 COL1A2_G_f COL1A2_G_r
VIEW COL3A1 COL3A1_G_1_f COL3A1_G_r
VIEW COL5A2 COL5A2_G_f COL5A2_G_r
VIEW CTNNB1 CTNNB1_G_f CTNNB1_G_r
VIEW DSC2 DSC2_G_f DSC2_G_r
VIEW DSP DSP_G_1_f DSP_G_r
VIEW EIF4G2 EIF4G2_G_f EIF4G2_G_r
VIEW ERBB3 ERBB3_G_f ERBB3_G_r
VIEW ESR1 ESR1_G_f ESR1_G_1_r
VIEW F11R F11R_G_f F11R_G_r
VIEW FN1 FN1_G_f FN1_G_r
QPCR Relative Expression Quantification : NF pairwise rate map
QPCR Relative Expression Quantification : NF Histogram
QPCR Relative Expression Quantification : Reference Genes list

Reference Genes For Relative Expression Analysis

  • MRPL19_G_3_f MRPL19_G_3_r
  • GAPDH_G_f GAPDH_G_r
  • YWHAZ_G_f YWHAZ_G_r
QPCR Relative Expression Quantification : Reports

Comments on the experiments

  • same sample as discovery screen LCM epithelial
  • same sample as discovery screen LCM epithelial
  • same sample as discovery screen LCM epithelial
  • same sample as discovery screen LCM epithelial
  • same sample as discovery screen LCM epithelial
  • same sample as discovery screen LCM epithelial
  • same sample as discovery screen LCM epithelial
  • same sample as discovery screen LCM epithelial
  • same sample as discovery screen LCM epithelial
QPCR Genorm : M -- average pairwise expression ratio
Primer Pair 8 7 6 5 4 3 2 1
HMBS_G_3_f HMBS_G_3_r 80.285
SDHA_G_f SDHA_G_r 80.136 74.659
PUM1_G_2_f PUM1_G_2_r 24.716 16.324 4.575
PSMC4_G_1_f PSMC4_G_1_r 22.646 13.969 1.786 1.084
B2M_G_3_f B2M_G_3_r 22.425 13.669 1.499 0.757 0.653
MRPL19_G_3_f MRPL19_G_3_r 22.439 13.736 1.564 0.752 0.622 0.622
GAPDH_G_f GAPDH_G_r 22.327 13.584 1.410 0.646 0.555 0.555
YWHAZ_G_f YWHAZ_G_r 22.348 13.604 1.440 0.666 0.484 0.484

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