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Supplementary data
Tumor microenvironment associated modifications of alternative splicing
RefSeq ASE screen
RefSeq Ovary Detection Screen
Transcript map
: ABCC11 FAL (VOA 863)
Exon
Length: 46
Transcript: NM_032583
Length: 46
Transcript: NM_032583
Exon
Length: 117
Transcript: NM_032583
Length: 117
Transcript: NM_032583
Exon
Length: 137
Transcript: NM_032583
Length: 137
Transcript: NM_032583
Exon
Length: 159
Transcript: NM_032583
Length: 159
Transcript: NM_032583
Exon
Length: 148
Transcript: NM_032583
Length: 148
Transcript: NM_032583
Exon
Length: 234
Transcript: NM_032583
Length: 234
Transcript: NM_032583
Exon
Length: 174
Transcript: NM_032583
Length: 174
Transcript: NM_032583
Exon
Length: 148
Transcript: NM_032583
Length: 148
Transcript: NM_032583
Exon
Length: 149
Transcript: NM_032583
Length: 149
Transcript: NM_032583
Exon
Length: 108
Transcript: NM_032583
Length: 108
Transcript: NM_032583
Exon
Length: 252
Transcript: NM_032583
Length: 252
Transcript: NM_032583
Exon
Length: 72
Transcript: NM_032583
Length: 72
Transcript: NM_032583
Exon
Length: 125
Transcript: NM_032583
Length: 125
Transcript: NM_032583
Exon
Length: 73
Transcript: NM_032583
Length: 73
Transcript: NM_032583
Exon
Length: 204
Transcript: NM_032583
Length: 204
Transcript: NM_032583
Exon
Length: 135
Transcript: NM_032583
Length: 135
Transcript: NM_032583
Exon
Length: 97
Transcript: NM_032583
Length: 97
Transcript: NM_032583
Exon
Length: 90
Transcript: NM_032583
Length: 90
Transcript: NM_032583
Exon
Length: 104
Transcript: NM_032583
Length: 104
Transcript: NM_032583
Exon
Length: 198
Transcript: NM_032583
Length: 198
Transcript: NM_032583
Exon
Length: 227
Transcript: NM_032583
Length: 227
Transcript: NM_032583
Exon
Length: 138
Transcript: NM_032583
Length: 138
Transcript: NM_032583
Exon
Length: 187
Transcript: NM_032583
Length: 187
Transcript: NM_032583
Exon
Length: 90
Transcript: NM_032583
Length: 90
Transcript: NM_032583
Exon
Length: 190
Transcript: NM_032583
Length: 190
Transcript: NM_032583
Exon
Length: 160
Transcript: NM_032583
Length: 160
Transcript: NM_032583
Exon
Length: 79
Transcript: NM_032583
Length: 79
Transcript: NM_032583
Exon
Length: 114
Transcript: NM_032583
Length: 114
Transcript: NM_032583
Exon
Length: 165
Transcript: NM_032583
Length: 165
Transcript: NM_032583
Exon
Length: 456
Transcript: NM_032583
Length: 456
Transcript: NM_032583
Intron
Length: 3192
Transcript: NM_032583
Length: 3192
Transcript: NM_032583
Intron
Length: 1249
Transcript: NM_032583
Length: 1249
Transcript: NM_032583
Intron
Length: 2472
Transcript: NM_032583
Length: 2472
Transcript: NM_032583
Intron
Length: 3376
Transcript: NM_032583
Length: 3376
Transcript: NM_032583
Intron
Length: 1450
Transcript: NM_032583
Length: 1450
Transcript: NM_032583
Intron
Length: 6310
Transcript: NM_032583
Length: 6310
Transcript: NM_032583
Intron
Length: 769
Transcript: NM_032583
Length: 769
Transcript: NM_032583
Intron
Length: 167
Transcript: NM_032583
Length: 167
Transcript: NM_032583
Intron
Length: 1330
Transcript: NM_032583
Length: 1330
Transcript: NM_032583
Intron
Length: 2243
Transcript: NM_032583
Length: 2243
Transcript: NM_032583
Intron
Length: 2451
Transcript: NM_032583
Length: 2451
Transcript: NM_032583
Intron
Length: 2887
Transcript: NM_032583
Length: 2887
Transcript: NM_032583
Intron
Length: 2112
Transcript: NM_032583
Length: 2112
Transcript: NM_032583
Intron
Length: 2748
Transcript: NM_032583
Length: 2748
Transcript: NM_032583
Intron
Length: 2000
Transcript: NM_032583
Length: 2000
Transcript: NM_032583
Intron
Length: 73
Transcript: NM_032583
Length: 73
Transcript: NM_032583
Intron
Length: 1649
Transcript: NM_032583
Length: 1649
Transcript: NM_032583
Intron
Length: 2249
Transcript: NM_032583
Length: 2249
Transcript: NM_032583
Intron
Length: 1161
Transcript: NM_032583
Length: 1161
Transcript: NM_032583
Intron
Length: 5092
Transcript: NM_032583
Length: 5092
Transcript: NM_032583
Intron
Length: 110
Transcript: NM_032583
Length: 110
Transcript: NM_032583
Intron
Length: 2326
Transcript: NM_032583
Length: 2326
Transcript: NM_032583
Intron
Length: 5753
Transcript: NM_032583
Length: 5753
Transcript: NM_032583
Intron
Length: 1483
Transcript: NM_032583
Length: 1483
Transcript: NM_032583
Intron
Length: 1506
Transcript: NM_032583
Length: 1506
Transcript: NM_032583
Intron
Length: 4290
Transcript: NM_032583
Length: 4290
Transcript: NM_032583
Intron
Length: 670
Transcript: NM_032583
Length: 670
Transcript: NM_032583
Intron
Length: 2444
Transcript: NM_032583
Length: 2444
Transcript: NM_032583
Intron
Length: 129
Transcript: NM_032583
Length: 129
Transcript: NM_032583
Reaction
Expected peak: 355
12.7M
refseq_ABCC11.F1
refseq_ABCC11.R1
Expected peak: 355
12.7M
refseq_ABCC11.F1
refseq_ABCC11.R1
Exon
Length: 449
Transcript: NM_033151
Length: 449
Transcript: NM_033151
Exon
Length: 137
Transcript: NM_033151
Length: 137
Transcript: NM_033151
Exon
Length: 159
Transcript: NM_033151
Length: 159
Transcript: NM_033151
Exon
Length: 148
Transcript: NM_033151
Length: 148
Transcript: NM_033151
Exon
Length: 234
Transcript: NM_033151
Length: 234
Transcript: NM_033151
Exon
Length: 174
Transcript: NM_033151
Length: 174
Transcript: NM_033151
Exon
Length: 148
Transcript: NM_033151
Length: 148
Transcript: NM_033151
Exon
Length: 149
Transcript: NM_033151
Length: 149
Transcript: NM_033151
Exon
Length: 108
Transcript: NM_033151
Length: 108
Transcript: NM_033151
Exon
Length: 252
Transcript: NM_033151
Length: 252
Transcript: NM_033151
Exon
Length: 72
Transcript: NM_033151
Length: 72
Transcript: NM_033151
Exon
Length: 125
Transcript: NM_033151
Length: 125
Transcript: NM_033151
Exon
Length: 73
Transcript: NM_033151
Length: 73
Transcript: NM_033151
Exon
Length: 204
Transcript: NM_033151
Length: 204
Transcript: NM_033151
Exon
Length: 135
Transcript: NM_033151
Length: 135
Transcript: NM_033151
Exon
Length: 97
Transcript: NM_033151
Length: 97
Transcript: NM_033151
Exon
Length: 90
Transcript: NM_033151
Length: 90
Transcript: NM_033151
Exon
Length: 104
Transcript: NM_033151
Length: 104
Transcript: NM_033151
Exon
Length: 198
Transcript: NM_033151
Length: 198
Transcript: NM_033151
Exon
Length: 227
Transcript: NM_033151
Length: 227
Transcript: NM_033151
Exon
Length: 138
Transcript: NM_033151
Length: 138
Transcript: NM_033151
Exon
Length: 187
Transcript: NM_033151
Length: 187
Transcript: NM_033151
Exon
Length: 90
Transcript: NM_033151
Length: 90
Transcript: NM_033151
Exon
Length: 190
Transcript: NM_033151
Length: 190
Transcript: NM_033151
Exon
Length: 160
Transcript: NM_033151
Length: 160
Transcript: NM_033151
Exon
Length: 79
Transcript: NM_033151
Length: 79
Transcript: NM_033151
Exon
Length: 114
Transcript: NM_033151
Length: 114
Transcript: NM_033151
Exon
Length: 165
Transcript: NM_033151
Length: 165
Transcript: NM_033151
Exon
Length: 456
Transcript: NM_033151
Length: 456
Transcript: NM_033151
Intron
Length: 1249
Transcript: NM_033151
Length: 1249
Transcript: NM_033151
Intron
Length: 2472
Transcript: NM_033151
Length: 2472
Transcript: NM_033151
Intron
Length: 3376
Transcript: NM_033151
Length: 3376
Transcript: NM_033151
Intron
Length: 1450
Transcript: NM_033151
Length: 1450
Transcript: NM_033151
Intron
Length: 6310
Transcript: NM_033151
Length: 6310
Transcript: NM_033151
Intron
Length: 769
Transcript: NM_033151
Length: 769
Transcript: NM_033151
Intron
Length: 167
Transcript: NM_033151
Length: 167
Transcript: NM_033151
Intron
Length: 1330
Transcript: NM_033151
Length: 1330
Transcript: NM_033151
Intron
Length: 2243
Transcript: NM_033151
Length: 2243
Transcript: NM_033151
Intron
Length: 2451
Transcript: NM_033151
Length: 2451
Transcript: NM_033151
Intron
Length: 2887
Transcript: NM_033151
Length: 2887
Transcript: NM_033151
Intron
Length: 2112
Transcript: NM_033151
Length: 2112
Transcript: NM_033151
Intron
Length: 2748
Transcript: NM_033151
Length: 2748
Transcript: NM_033151
Intron
Length: 2000
Transcript: NM_033151
Length: 2000
Transcript: NM_033151
Intron
Length: 73
Transcript: NM_033151
Length: 73
Transcript: NM_033151
Intron
Length: 1649
Transcript: NM_033151
Length: 1649
Transcript: NM_033151
Intron
Length: 2249
Transcript: NM_033151
Length: 2249
Transcript: NM_033151
Intron
Length: 1161
Transcript: NM_033151
Length: 1161
Transcript: NM_033151
Intron
Length: 5092
Transcript: NM_033151
Length: 5092
Transcript: NM_033151
Intron
Length: 110
Transcript: NM_033151
Length: 110
Transcript: NM_033151
Intron
Length: 2326
Transcript: NM_033151
Length: 2326
Transcript: NM_033151
Intron
Length: 5753
Transcript: NM_033151
Length: 5753
Transcript: NM_033151
Intron
Length: 1483
Transcript: NM_033151
Length: 1483
Transcript: NM_033151
Intron
Length: 1506
Transcript: NM_033151
Length: 1506
Transcript: NM_033151
Intron
Length: 4290
Transcript: NM_033151
Length: 4290
Transcript: NM_033151
Intron
Length: 670
Transcript: NM_033151
Length: 670
Transcript: NM_033151
Intron
Length: 2444
Transcript: NM_033151
Length: 2444
Transcript: NM_033151
Intron
Length: 129
Transcript: NM_033151
Length: 129
Transcript: NM_033151
Reaction
Expected peak: 355
12.7M
refseq_ABCC11.F1
refseq_ABCC11.R1
Expected peak: 355
12.7M
refseq_ABCC11.F1
refseq_ABCC11.R1
Exon
Length: 46
Transcript: NM_145186
Length: 46
Transcript: NM_145186
Exon
Length: 117
Transcript: NM_145186
Length: 117
Transcript: NM_145186
Exon
Length: 137
Transcript: NM_145186
Length: 137
Transcript: NM_145186
Exon
Length: 159
Transcript: NM_145186
Length: 159
Transcript: NM_145186
Exon
Length: 148
Transcript: NM_145186
Length: 148
Transcript: NM_145186
Exon
Length: 234
Transcript: NM_145186
Length: 234
Transcript: NM_145186
Exon
Length: 174
Transcript: NM_145186
Length: 174
Transcript: NM_145186
Exon
Length: 148
Transcript: NM_145186
Length: 148
Transcript: NM_145186
Exon
Length: 149
Transcript: NM_145186
Length: 149
Transcript: NM_145186
Exon
Length: 108
Transcript: NM_145186
Length: 108
Transcript: NM_145186
Exon
Length: 252
Transcript: NM_145186
Length: 252
Transcript: NM_145186
Exon
Length: 72
Transcript: NM_145186
Length: 72
Transcript: NM_145186
Exon
Length: 125
Transcript: NM_145186
Length: 125
Transcript: NM_145186
Exon
Length: 73
Transcript: NM_145186
Length: 73
Transcript: NM_145186
Exon
Length: 204
Transcript: NM_145186
Length: 204
Transcript: NM_145186
Exon
Length: 135
Transcript: NM_145186
Length: 135
Transcript: NM_145186
Exon
Length: 97
Transcript: NM_145186
Length: 97
Transcript: NM_145186
Exon
Length: 90
Transcript: NM_145186
Length: 90
Transcript: NM_145186
Exon
Length: 104
Transcript: NM_145186
Length: 104
Transcript: NM_145186
Exon
Length: 198
Transcript: NM_145186
Length: 198
Transcript: NM_145186
Exon
Length: 227
Transcript: NM_145186
Length: 227
Transcript: NM_145186
Exon
Length: 138
Transcript: NM_145186
Length: 138
Transcript: NM_145186
Exon
Length: 187
Transcript: NM_145186
Length: 187
Transcript: NM_145186
Exon
Length: 90
Transcript: NM_145186
Length: 90
Transcript: NM_145186
Exon
Length: 190
Transcript: NM_145186
Length: 190
Transcript: NM_145186
Exon
Length: 160
Transcript: NM_145186
Length: 160
Transcript: NM_145186
Exon
Length: 79
Transcript: NM_145186
Length: 79
Transcript: NM_145186
Exon
Length: 165
Transcript: NM_145186
Length: 165
Transcript: NM_145186
Exon
Length: 456
Transcript: NM_145186
Length: 456
Transcript: NM_145186
Intron
Length: 3192
Transcript: NM_145186
Length: 3192
Transcript: NM_145186
Intron
Length: 1249
Transcript: NM_145186
Length: 1249
Transcript: NM_145186
Intron
Length: 2472
Transcript: NM_145186
Length: 2472
Transcript: NM_145186
Intron
Length: 3376
Transcript: NM_145186
Length: 3376
Transcript: NM_145186
Intron
Length: 1450
Transcript: NM_145186
Length: 1450
Transcript: NM_145186
Intron
Length: 6310
Transcript: NM_145186
Length: 6310
Transcript: NM_145186
Intron
Length: 769
Transcript: NM_145186
Length: 769
Transcript: NM_145186
Intron
Length: 167
Transcript: NM_145186
Length: 167
Transcript: NM_145186
Intron
Length: 1330
Transcript: NM_145186
Length: 1330
Transcript: NM_145186
Intron
Length: 2243
Transcript: NM_145186
Length: 2243
Transcript: NM_145186
Intron
Length: 2451
Transcript: NM_145186
Length: 2451
Transcript: NM_145186
Intron
Length: 2887
Transcript: NM_145186
Length: 2887
Transcript: NM_145186
Intron
Length: 2112
Transcript: NM_145186
Length: 2112
Transcript: NM_145186
Intron
Length: 2748
Transcript: NM_145186
Length: 2748
Transcript: NM_145186
Intron
Length: 2000
Transcript: NM_145186
Length: 2000
Transcript: NM_145186
Intron
Length: 73
Transcript: NM_145186
Length: 73
Transcript: NM_145186
Intron
Length: 1649
Transcript: NM_145186
Length: 1649
Transcript: NM_145186
Intron
Length: 2249
Transcript: NM_145186
Length: 2249
Transcript: NM_145186
Intron
Length: 1161
Transcript: NM_145186
Length: 1161
Transcript: NM_145186
Intron
Length: 5092
Transcript: NM_145186
Length: 5092
Transcript: NM_145186
Intron
Length: 110
Transcript: NM_145186
Length: 110
Transcript: NM_145186
Intron
Length: 2326
Transcript: NM_145186
Length: 2326
Transcript: NM_145186
Intron
Length: 5753
Transcript: NM_145186
Length: 5753
Transcript: NM_145186
Intron
Length: 1483
Transcript: NM_145186
Length: 1483
Transcript: NM_145186
Intron
Length: 1506
Transcript: NM_145186
Length: 1506
Transcript: NM_145186
Intron
Length: 4290
Transcript: NM_145186
Length: 4290
Transcript: NM_145186
Intron
Length: 3228
Transcript: NM_145186
Length: 3228
Transcript: NM_145186
Intron
Length: 129
Transcript: NM_145186
Length: 129
Transcript: NM_145186
Reaction
Expected peak: 241
0M
refseq_ABCC11.F1
refseq_ABCC11.R1
Expected peak: 241
0M
refseq_ABCC11.F1
refseq_ABCC11.R1
refseq_ABCC11.R1
CTTCCCATTGCCCATAACC
CTTCCCATTGCCCATAACC
refseq_ABCC11.F1
CAACCTAGATCCCTTTGACCG
CAACCTAGATCCCTTTGACCG