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Supplementary data
Tumor microenvironment associated modifications of alternative splicing
RefSeq ASE screen
RefSeq Ovary Detection Screen
Transcript map
: ABLIM1 FAL (VOA 863)
- refseq_ABLIM1.F1 / refseq_ABLIM1.R1 (CM016689 O1) : Curve | Curve set
- refseq_ABLIM1.F3 / refseq_ABLIM1.R3 (CM016689 O3) : Curve | Curve set
Exon
Length: 366
Transcript: NM_001003407
Length: 366
Transcript: NM_001003407
Exon
Length: 135
Transcript: NM_001003407
Length: 135
Transcript: NM_001003407
Exon
Length: 184
Transcript: NM_001003407
Length: 184
Transcript: NM_001003407
Exon
Length: 110
Transcript: NM_001003407
Length: 110
Transcript: NM_001003407
Exon
Length: 127
Transcript: NM_001003407
Length: 127
Transcript: NM_001003407
Exon
Length: 94
Transcript: NM_001003407
Length: 94
Transcript: NM_001003407
Exon
Length: 88
Transcript: NM_001003407
Length: 88
Transcript: NM_001003407
Exon
Length: 59
Transcript: NM_001003407
Length: 59
Transcript: NM_001003407
Exon
Length: 78
Transcript: NM_001003407
Length: 78
Transcript: NM_001003407
Exon
Length: 156
Transcript: NM_001003407
Length: 156
Transcript: NM_001003407
Exon
Length: 36
Transcript: NM_001003407
Length: 36
Transcript: NM_001003407
Exon
Length: 130
Transcript: NM_001003407
Length: 130
Transcript: NM_001003407
Exon
Length: 105
Transcript: NM_001003407
Length: 105
Transcript: NM_001003407
Exon
Length: 48
Transcript: NM_001003407
Length: 48
Transcript: NM_001003407
Exon
Length: 141
Transcript: NM_001003407
Length: 141
Transcript: NM_001003407
Exon
Length: 92
Transcript: NM_001003407
Length: 92
Transcript: NM_001003407
Exon
Length: 106
Transcript: NM_001003407
Length: 106
Transcript: NM_001003407
Exon
Length: 65
Transcript: NM_001003407
Length: 65
Transcript: NM_001003407
Exon
Length: 61
Transcript: NM_001003407
Length: 61
Transcript: NM_001003407
Exon
Length: 8
Transcript: NM_001003407
Length: 8
Transcript: NM_001003407
Exon
Length: 75
Transcript: NM_001003407
Length: 75
Transcript: NM_001003407
Exon
Length: 81
Transcript: NM_001003407
Length: 81
Transcript: NM_001003407
Exon
Length: 5264
Transcript: NM_001003407
Length: 5264
Transcript: NM_001003407
Intron
Length: 82328
Transcript: NM_001003407
Length: 82328
Transcript: NM_001003407
Intron
Length: 26227
Transcript: NM_001003407
Length: 26227
Transcript: NM_001003407
Intron
Length: 4009
Transcript: NM_001003407
Length: 4009
Transcript: NM_001003407
Intron
Length: 23520
Transcript: NM_001003407
Length: 23520
Transcript: NM_001003407
Intron
Length: 2551
Transcript: NM_001003407
Length: 2551
Transcript: NM_001003407
Intron
Length: 53126
Transcript: NM_001003407
Length: 53126
Transcript: NM_001003407
Intron
Length: 3774
Transcript: NM_001003407
Length: 3774
Transcript: NM_001003407
Intron
Length: 14001
Transcript: NM_001003407
Length: 14001
Transcript: NM_001003407
Intron
Length: 746
Transcript: NM_001003407
Length: 746
Transcript: NM_001003407
Intron
Length: 4760
Transcript: NM_001003407
Length: 4760
Transcript: NM_001003407
Intron
Length: 2353
Transcript: NM_001003407
Length: 2353
Transcript: NM_001003407
Intron
Length: 12214
Transcript: NM_001003407
Length: 12214
Transcript: NM_001003407
Intron
Length: 1707
Transcript: NM_001003407
Length: 1707
Transcript: NM_001003407
Intron
Length: 3603
Transcript: NM_001003407
Length: 3603
Transcript: NM_001003407
Intron
Length: 2476
Transcript: NM_001003407
Length: 2476
Transcript: NM_001003407
Intron
Length: 1177
Transcript: NM_001003407
Length: 1177
Transcript: NM_001003407
Intron
Length: 2242
Transcript: NM_001003407
Length: 2242
Transcript: NM_001003407
Intron
Length: 644
Transcript: NM_001003407
Length: 644
Transcript: NM_001003407
Intron
Length: 927
Transcript: NM_001003407
Length: 927
Transcript: NM_001003407
Intron
Length: 831
Transcript: NM_001003407
Length: 831
Transcript: NM_001003407
Intron
Length: 1251
Transcript: NM_001003407
Length: 1251
Transcript: NM_001003407
Intron
Length: 1470
Transcript: NM_001003407
Length: 1470
Transcript: NM_001003407
Reaction
Expected peak: 272
0M
refseq_ABLIM1.F1
refseq_ABLIM1.R1
Expected peak: 272
0M
refseq_ABLIM1.F1
refseq_ABLIM1.R1
Reaction
Expected peak: 119
211M
refseq_ABLIM1.F3
refseq_ABLIM1.R3
Expected peak: 119
211M
refseq_ABLIM1.F3
refseq_ABLIM1.R3
Exon
Length: 366
Transcript: NM_001003408
Length: 366
Transcript: NM_001003408
Exon
Length: 135
Transcript: NM_001003408
Length: 135
Transcript: NM_001003408
Exon
Length: 184
Transcript: NM_001003408
Length: 184
Transcript: NM_001003408
Exon
Length: 110
Transcript: NM_001003408
Length: 110
Transcript: NM_001003408
Exon
Length: 127
Transcript: NM_001003408
Length: 127
Transcript: NM_001003408
Exon
Length: 94
Transcript: NM_001003408
Length: 94
Transcript: NM_001003408
Exon
Length: 88
Transcript: NM_001003408
Length: 88
Transcript: NM_001003408
Exon
Length: 59
Transcript: NM_001003408
Length: 59
Transcript: NM_001003408
Exon
Length: 84
Transcript: NM_001003408
Length: 84
Transcript: NM_001003408
Exon
Length: 78
Transcript: NM_001003408
Length: 78
Transcript: NM_001003408
Exon
Length: 156
Transcript: NM_001003408
Length: 156
Transcript: NM_001003408
Exon
Length: 36
Transcript: NM_001003408
Length: 36
Transcript: NM_001003408
Exon
Length: 130
Transcript: NM_001003408
Length: 130
Transcript: NM_001003408
Exon
Length: 105
Transcript: NM_001003408
Length: 105
Transcript: NM_001003408
Exon
Length: 48
Transcript: NM_001003408
Length: 48
Transcript: NM_001003408
Exon
Length: 141
Transcript: NM_001003408
Length: 141
Transcript: NM_001003408
Exon
Length: 92
Transcript: NM_001003408
Length: 92
Transcript: NM_001003408
Exon
Length: 106
Transcript: NM_001003408
Length: 106
Transcript: NM_001003408
Exon
Length: 65
Transcript: NM_001003408
Length: 65
Transcript: NM_001003408
Exon
Length: 61
Transcript: NM_001003408
Length: 61
Transcript: NM_001003408
Exon
Length: 8
Transcript: NM_001003408
Length: 8
Transcript: NM_001003408
Exon
Length: 75
Transcript: NM_001003408
Length: 75
Transcript: NM_001003408
Exon
Length: 81
Transcript: NM_001003408
Length: 81
Transcript: NM_001003408
Exon
Length: 5264
Transcript: NM_001003408
Length: 5264
Transcript: NM_001003408
Intron
Length: 82328
Transcript: NM_001003408
Length: 82328
Transcript: NM_001003408
Intron
Length: 26227
Transcript: NM_001003408
Length: 26227
Transcript: NM_001003408
Intron
Length: 4009
Transcript: NM_001003408
Length: 4009
Transcript: NM_001003408
Intron
Length: 23520
Transcript: NM_001003408
Length: 23520
Transcript: NM_001003408
Intron
Length: 2551
Transcript: NM_001003408
Length: 2551
Transcript: NM_001003408
Intron
Length: 53126
Transcript: NM_001003408
Length: 53126
Transcript: NM_001003408
Intron
Length: 3774
Transcript: NM_001003408
Length: 3774
Transcript: NM_001003408
Intron
Length: 2577
Transcript: NM_001003408
Length: 2577
Transcript: NM_001003408
Intron
Length: 11340
Transcript: NM_001003408
Length: 11340
Transcript: NM_001003408
Intron
Length: 746
Transcript: NM_001003408
Length: 746
Transcript: NM_001003408
Intron
Length: 4760
Transcript: NM_001003408
Length: 4760
Transcript: NM_001003408
Intron
Length: 2353
Transcript: NM_001003408
Length: 2353
Transcript: NM_001003408
Intron
Length: 12214
Transcript: NM_001003408
Length: 12214
Transcript: NM_001003408
Intron
Length: 1707
Transcript: NM_001003408
Length: 1707
Transcript: NM_001003408
Intron
Length: 3603
Transcript: NM_001003408
Length: 3603
Transcript: NM_001003408
Intron
Length: 2476
Transcript: NM_001003408
Length: 2476
Transcript: NM_001003408
Intron
Length: 1177
Transcript: NM_001003408
Length: 1177
Transcript: NM_001003408
Intron
Length: 2242
Transcript: NM_001003408
Length: 2242
Transcript: NM_001003408
Intron
Length: 644
Transcript: NM_001003408
Length: 644
Transcript: NM_001003408
Intron
Length: 927
Transcript: NM_001003408
Length: 927
Transcript: NM_001003408
Intron
Length: 831
Transcript: NM_001003408
Length: 831
Transcript: NM_001003408
Intron
Length: 1251
Transcript: NM_001003408
Length: 1251
Transcript: NM_001003408
Intron
Length: 1470
Transcript: NM_001003408
Length: 1470
Transcript: NM_001003408
Reaction
Expected peak: 272
0M
refseq_ABLIM1.F1
refseq_ABLIM1.R1
Expected peak: 272
0M
refseq_ABLIM1.F1
refseq_ABLIM1.R1
Reaction
Expected peak: 203
0M
refseq_ABLIM1.F3
refseq_ABLIM1.R3
Expected peak: 203
0M
refseq_ABLIM1.F3
refseq_ABLIM1.R3
Exon
Length: 343
Transcript: NM_002313
Length: 343
Transcript: NM_002313
Exon
Length: 135
Transcript: NM_002313
Length: 135
Transcript: NM_002313
Exon
Length: 184
Transcript: NM_002313
Length: 184
Transcript: NM_002313
Exon
Length: 110
Transcript: NM_002313
Length: 110
Transcript: NM_002313
Exon
Length: 127
Transcript: NM_002313
Length: 127
Transcript: NM_002313
Exon
Length: 94
Transcript: NM_002313
Length: 94
Transcript: NM_002313
Exon
Length: 88
Transcript: NM_002313
Length: 88
Transcript: NM_002313
Exon
Length: 59
Transcript: NM_002313
Length: 59
Transcript: NM_002313
Exon
Length: 78
Transcript: NM_002313
Length: 78
Transcript: NM_002313
Exon
Length: 156
Transcript: NM_002313
Length: 156
Transcript: NM_002313
Exon
Length: 36
Transcript: NM_002313
Length: 36
Transcript: NM_002313
Exon
Length: 130
Transcript: NM_002313
Length: 130
Transcript: NM_002313
Exon
Length: 105
Transcript: NM_002313
Length: 105
Transcript: NM_002313
Exon
Length: 48
Transcript: NM_002313
Length: 48
Transcript: NM_002313
Exon
Length: 141
Transcript: NM_002313
Length: 141
Transcript: NM_002313
Exon
Length: 92
Transcript: NM_002313
Length: 92
Transcript: NM_002313
Exon
Length: 106
Transcript: NM_002313
Length: 106
Transcript: NM_002313
Exon
Length: 65
Transcript: NM_002313
Length: 65
Transcript: NM_002313
Exon
Length: 61
Transcript: NM_002313
Length: 61
Transcript: NM_002313
Exon
Length: 8
Transcript: NM_002313
Length: 8
Transcript: NM_002313
Exon
Length: 75
Transcript: NM_002313
Length: 75
Transcript: NM_002313
Exon
Length: 81
Transcript: NM_002313
Length: 81
Transcript: NM_002313
Exon
Length: 5264
Transcript: NM_002313
Length: 5264
Transcript: NM_002313
Intron
Length: 55995
Transcript: NM_002313
Length: 55995
Transcript: NM_002313
Intron
Length: 26227
Transcript: NM_002313
Length: 26227
Transcript: NM_002313
Intron
Length: 4009
Transcript: NM_002313
Length: 4009
Transcript: NM_002313
Intron
Length: 23520
Transcript: NM_002313
Length: 23520
Transcript: NM_002313
Intron
Length: 2551
Transcript: NM_002313
Length: 2551
Transcript: NM_002313
Intron
Length: 53126
Transcript: NM_002313
Length: 53126
Transcript: NM_002313
Intron
Length: 3774
Transcript: NM_002313
Length: 3774
Transcript: NM_002313
Intron
Length: 14001
Transcript: NM_002313
Length: 14001
Transcript: NM_002313
Intron
Length: 746
Transcript: NM_002313
Length: 746
Transcript: NM_002313
Intron
Length: 4760
Transcript: NM_002313
Length: 4760
Transcript: NM_002313
Intron
Length: 2353
Transcript: NM_002313
Length: 2353
Transcript: NM_002313
Intron
Length: 12214
Transcript: NM_002313
Length: 12214
Transcript: NM_002313
Intron
Length: 1707
Transcript: NM_002313
Length: 1707
Transcript: NM_002313
Intron
Length: 3603
Transcript: NM_002313
Length: 3603
Transcript: NM_002313
Intron
Length: 2476
Transcript: NM_002313
Length: 2476
Transcript: NM_002313
Intron
Length: 1177
Transcript: NM_002313
Length: 1177
Transcript: NM_002313
Intron
Length: 2242
Transcript: NM_002313
Length: 2242
Transcript: NM_002313
Intron
Length: 644
Transcript: NM_002313
Length: 644
Transcript: NM_002313
Intron
Length: 927
Transcript: NM_002313
Length: 927
Transcript: NM_002313
Intron
Length: 831
Transcript: NM_002313
Length: 831
Transcript: NM_002313
Intron
Length: 1251
Transcript: NM_002313
Length: 1251
Transcript: NM_002313
Intron
Length: 1470
Transcript: NM_002313
Length: 1470
Transcript: NM_002313
Reaction
Expected peak: 272
0M
refseq_ABLIM1.F1
refseq_ABLIM1.R1
Expected peak: 272
0M
refseq_ABLIM1.F1
refseq_ABLIM1.R1
Reaction
Expected peak: 119
211M
refseq_ABLIM1.F3
refseq_ABLIM1.R3
Expected peak: 119
211M
refseq_ABLIM1.F3
refseq_ABLIM1.R3
Exon
Length: 267
Transcript: NM_006720
Length: 267
Transcript: NM_006720
Exon
Length: 88
Transcript: NM_006720
Length: 88
Transcript: NM_006720
Exon
Length: 59
Transcript: NM_006720
Length: 59
Transcript: NM_006720
Exon
Length: 84
Transcript: NM_006720
Length: 84
Transcript: NM_006720
Exon
Length: 78
Transcript: NM_006720
Length: 78
Transcript: NM_006720
Exon
Length: 156
Transcript: NM_006720
Length: 156
Transcript: NM_006720
Exon
Length: 36
Transcript: NM_006720
Length: 36
Transcript: NM_006720
Exon
Length: 130
Transcript: NM_006720
Length: 130
Transcript: NM_006720
Exon
Length: 48
Transcript: NM_006720
Length: 48
Transcript: NM_006720
Exon
Length: 141
Transcript: NM_006720
Length: 141
Transcript: NM_006720
Exon
Length: 92
Transcript: NM_006720
Length: 92
Transcript: NM_006720
Exon
Length: 106
Transcript: NM_006720
Length: 106
Transcript: NM_006720
Exon
Length: 65
Transcript: NM_006720
Length: 65
Transcript: NM_006720
Exon
Length: 61
Transcript: NM_006720
Length: 61
Transcript: NM_006720
Exon
Length: 8
Transcript: NM_006720
Length: 8
Transcript: NM_006720
Exon
Length: 75
Transcript: NM_006720
Length: 75
Transcript: NM_006720
Exon
Length: 81
Transcript: NM_006720
Length: 81
Transcript: NM_006720
Exon
Length: 5264
Transcript: NM_006720
Length: 5264
Transcript: NM_006720
Intron
Length: 34781
Transcript: NM_006720
Length: 34781
Transcript: NM_006720
Intron
Length: 3774
Transcript: NM_006720
Length: 3774
Transcript: NM_006720
Intron
Length: 2577
Transcript: NM_006720
Length: 2577
Transcript: NM_006720
Intron
Length: 11340
Transcript: NM_006720
Length: 11340
Transcript: NM_006720
Intron
Length: 746
Transcript: NM_006720
Length: 746
Transcript: NM_006720
Intron
Length: 4760
Transcript: NM_006720
Length: 4760
Transcript: NM_006720
Intron
Length: 2353
Transcript: NM_006720
Length: 2353
Transcript: NM_006720
Intron
Length: 14026
Transcript: NM_006720
Length: 14026
Transcript: NM_006720
Intron
Length: 3603
Transcript: NM_006720
Length: 3603
Transcript: NM_006720
Intron
Length: 2476
Transcript: NM_006720
Length: 2476
Transcript: NM_006720
Intron
Length: 1177
Transcript: NM_006720
Length: 1177
Transcript: NM_006720
Intron
Length: 2242
Transcript: NM_006720
Length: 2242
Transcript: NM_006720
Intron
Length: 644
Transcript: NM_006720
Length: 644
Transcript: NM_006720
Intron
Length: 927
Transcript: NM_006720
Length: 927
Transcript: NM_006720
Intron
Length: 831
Transcript: NM_006720
Length: 831
Transcript: NM_006720
Intron
Length: 1251
Transcript: NM_006720
Length: 1251
Transcript: NM_006720
Intron
Length: 1470
Transcript: NM_006720
Length: 1470
Transcript: NM_006720
Reaction
Expected peak: 167
118M
refseq_ABLIM1.F1
refseq_ABLIM1.R1
Expected peak: 167
118M
refseq_ABLIM1.F1
refseq_ABLIM1.R1
Reaction
Expected peak: 203
0M
refseq_ABLIM1.F3
refseq_ABLIM1.R3
Expected peak: 203
0M
refseq_ABLIM1.F3
refseq_ABLIM1.R3
refseq_ABLIM1.F3
TCCCGACTGTAAGCAATCTACG
TCCCGACTGTAAGCAATCTACG
refseq_ABLIM1.F1
ATGTTCGGGATCGGATGATC
ATGTTCGGGATCGGATGATC
refseq_ABLIM1.R3
AGATAGTATGACCTGGTGAGCCA
AGATAGTATGACCTGGTGAGCCA
refseq_ABLIM1.R1
ATGCTGTTTGTAGATGGGTGG
ATGCTGTTTGTAGATGGGTGG