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Supplementary data
Tumor microenvironment associated modifications of alternative splicing
RefSeq ASE screen
RefSeq Ovary Detection Screen
Transcript map
: A26A1 FAL (VOA 863)
Exon
Length: 342
Transcript: NM_001002920
Length: 342
Transcript: NM_001002920
Exon
Length: 115
Transcript: NM_001002920
Length: 115
Transcript: NM_001002920
Exon
Length: 174
Transcript: NM_001002920
Length: 174
Transcript: NM_001002920
Exon
Length: 107
Transcript: NM_001002920
Length: 107
Transcript: NM_001002920
Exon
Length: 71
Transcript: NM_001002920
Length: 71
Transcript: NM_001002920
Exon
Length: 71
Transcript: NM_001002920
Length: 71
Transcript: NM_001002920
Exon
Length: 45
Transcript: NM_001002920
Length: 45
Transcript: NM_001002920
Exon
Length: 167
Transcript: NM_001002920
Length: 167
Transcript: NM_001002920
Exon
Length: 31
Transcript: NM_001002920
Length: 31
Transcript: NM_001002920
Exon
Length: 142
Transcript: NM_001002920
Length: 142
Transcript: NM_001002920
Exon
Length: 214
Transcript: NM_001002920
Length: 214
Transcript: NM_001002920
Exon
Length: 124
Transcript: NM_001002920
Length: 124
Transcript: NM_001002920
Exon
Length: 235
Transcript: NM_001002920
Length: 235
Transcript: NM_001002920
Intron
Length: 4236
Transcript: NM_001002920
Length: 4236
Transcript: NM_001002920
Intron
Length: 151
Transcript: NM_001002920
Length: 151
Transcript: NM_001002920
Intron
Length: 3058
Transcript: NM_001002920
Length: 3058
Transcript: NM_001002920
Intron
Length: 4074
Transcript: NM_001002920
Length: 4074
Transcript: NM_001002920
Intron
Length: 11121
Transcript: NM_001002920
Length: 11121
Transcript: NM_001002920
Intron
Length: 1392
Transcript: NM_001002920
Length: 1392
Transcript: NM_001002920
Intron
Length: 1057
Transcript: NM_001002920
Length: 1057
Transcript: NM_001002920
Intron
Length: 23256
Transcript: NM_001002920
Length: 23256
Transcript: NM_001002920
Intron
Length: 277
Transcript: NM_001002920
Length: 277
Transcript: NM_001002920
Intron
Length: 14430
Transcript: NM_001002920
Length: 14430
Transcript: NM_001002920
Intron
Length: 4070
Transcript: NM_001002920
Length: 4070
Transcript: NM_001002920
Intron
Length: 1784
Transcript: NM_001002920
Length: 1784
Transcript: NM_001002920
Reaction
Expected peak: 141
0M
rs.A26A1.F1
rs.A26A1.R1
Expected peak: 141
0M
rs.A26A1.F1
rs.A26A1.R1
Exon
Length: 342
Transcript: NM_001005365
Length: 342
Transcript: NM_001005365
Exon
Length: 115
Transcript: NM_001005365
Length: 115
Transcript: NM_001005365
Exon
Length: 174
Transcript: NM_001005365
Length: 174
Transcript: NM_001005365
Exon
Length: 107
Transcript: NM_001005365
Length: 107
Transcript: NM_001005365
Exon
Length: 138
Transcript: NM_001005365
Length: 138
Transcript: NM_001005365
Exon
Length: 71
Transcript: NM_001005365
Length: 71
Transcript: NM_001005365
Exon
Length: 71
Transcript: NM_001005365
Length: 71
Transcript: NM_001005365
Exon
Length: 45
Transcript: NM_001005365
Length: 45
Transcript: NM_001005365
Exon
Length: 167
Transcript: NM_001005365
Length: 167
Transcript: NM_001005365
Exon
Length: 31
Transcript: NM_001005365
Length: 31
Transcript: NM_001005365
Exon
Length: 142
Transcript: NM_001005365
Length: 142
Transcript: NM_001005365
Exon
Length: 214
Transcript: NM_001005365
Length: 214
Transcript: NM_001005365
Exon
Length: 124
Transcript: NM_001005365
Length: 124
Transcript: NM_001005365
Exon
Length: 235
Transcript: NM_001005365
Length: 235
Transcript: NM_001005365
Intron
Length: 4236
Transcript: NM_001005365
Length: 4236
Transcript: NM_001005365
Intron
Length: 151
Transcript: NM_001005365
Length: 151
Transcript: NM_001005365
Intron
Length: 3058
Transcript: NM_001005365
Length: 3058
Transcript: NM_001005365
Intron
Length: 1348
Transcript: NM_001005365
Length: 1348
Transcript: NM_001005365
Intron
Length: 2588
Transcript: NM_001005365
Length: 2588
Transcript: NM_001005365
Intron
Length: 11121
Transcript: NM_001005365
Length: 11121
Transcript: NM_001005365
Intron
Length: 1392
Transcript: NM_001005365
Length: 1392
Transcript: NM_001005365
Intron
Length: 1057
Transcript: NM_001005365
Length: 1057
Transcript: NM_001005365
Intron
Length: 23256
Transcript: NM_001005365
Length: 23256
Transcript: NM_001005365
Intron
Length: 277
Transcript: NM_001005365
Length: 277
Transcript: NM_001005365
Intron
Length: 14430
Transcript: NM_001005365
Length: 14430
Transcript: NM_001005365
Intron
Length: 4070
Transcript: NM_001005365
Length: 4070
Transcript: NM_001005365
Intron
Length: 1784
Transcript: NM_001005365
Length: 1784
Transcript: NM_001005365
Reaction
Expected peak: 279
0M
rs.A26A1.F1
rs.A26A1.R1
Expected peak: 279
0M
rs.A26A1.F1
rs.A26A1.R1
rs.A26A1.F1
GGACAAAAACAGCGAATGGTGA
GGACAAAAACAGCGAATGGTGA
rs.A26A1.R1
ATTGCTATTTCCAGAAGAGTTGTTTGG
ATTGCTATTTCCAGAAGAGTTGTTTGG