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Home Supplementary data Tumor microenvironment associated modifications of alternative splicing RefSeq ASE screen LCM Discovery sample set stromal signature permalink
LCM Discovery sample set stromal signature ⚙
QPCR Primer Pair List : primer pair list
Gene Forward Reverse
VIEW ABCB9 ABCB9_cass_L_f ABCB9_cass_L_r
VIEW ABCB9 ABCB9_cass_S_f ABCB9_cass_S_r
VIEW ABCD4 ABCD4_cass_L_2_f ABCD4_cass_L_2_r
VIEW ABCD4 ABCD4_cass_L_3_f ABCD4_cass_L_3_r
VIEW ABCD4 ABCD4_cass_S_2_f ABCD4_cass_S_1_r
VIEW ABCD4 ABCD4_cass_S_4_f ABCD4_cass_S_3_r
VIEW ABCG1 ABCG1_alt5_L_f ABCG1_alt5_L_r
VIEW ABCG1 ABCG1_alt5_S_f ABCG1_alt5_S_r
VIEW ABI1 ABI1_cass_L_5_f ABI1_cass_L_6_r
VIEW ABI1 ABI1_cass_S_3_f ABI1.S.R1
VIEW ABL2 ABL2_cass_S_1_f ABL2_cass_L_1_r
VIEW ABL2 ABL2_cass_S_f ABL2_cass_S_r
VIEW ABTB1 ABTB1_alt5_L_f ABTB1_alt5_S_r
VIEW ABTB1 ABTB1_alt5_S_f ABTB1_alt5_S_r
VIEW ACACA ACACA_cass_S_f ACACA_cass_L_r
VIEW ACACA ACACA_cass_S_f ACACA_cass_S_r
VIEW ACCN3 ACCN3_alt3_L_f ACCN3_alt3_L_r
VIEW ACCN3 ACCN3_alt3_S_f ACCN3_alt3_S_1_r
VIEW ACOT8 ACOT8_cass_L_1_f ACOT8_cass_L_1_r
VIEW ACOT8 ACOT8_cass_L_f ACOT8_cass_L_r
QPCR Primer Pair List : event list
Short Long
VIEW A2BP1_cass_S_f A2BP1_cass_S_r A2BP1_cass_L_f A2BP1_cass_L_1_r
VIEW ABCB9_cass_S_f ABCB9_cass_S_r ABCB9_cass_L_f ABCB9_cass_L_r
VIEW ABCD4_cass_S_2_f ABCD4_cass_S_1_r ABCD4_cass_L_2_f ABCD4_cass_L_2_r
VIEW ABCD4_cass_S_4_f ABCD4_cass_S_3_r ABCD4_cass_L_3_f ABCD4_cass_L_3_r
VIEW ABCG1_alt5_S_f ABCG1_alt5_S_r ABCG1_alt5_L_f ABCG1_alt5_L_r
VIEW ABI1_cass_S_3_f ABI1.S.R1 ABI1_cass_L_5_f ABI1_cass_L_6_r
VIEW ABL2_cass_S_f ABL2_cass_S_r ABL2_cass_S_1_f ABL2_cass_L_1_r
VIEW ABTB1_alt5_S_f ABTB1_alt5_S_r ABTB1_alt5_L_f ABTB1_alt5_S_r
VIEW ACACA_cass_S_f ACACA_cass_S_r ACACA_cass_S_f ACACA_cass_L_r
VIEW ACCN3_alt3_S_f ACCN3_alt3_S_1_r ACCN3_alt3_L_f ACCN3_alt3_L_r
VIEW ACOT8_cass_S_2_f ACOT8_cass_S_1_r ACOT8_cass_L_1_f ACOT8_cass_L_1_r
VIEW ACOT8_cass_S_f ACOT8_cass_S_r ACOT8_cass_L_f ACOT8_cass_L_r
VIEW ADAMTSL1_cass_S_f ADAMTSL1_cass_S_r ADAMTSL1_cass_L_1_f ADAMTSL1_cass_L_r
VIEW ADARB1_cass_S_1_f ADARB1_cass_S_2_r ADARB1_cass_L_2_f ADARB1_cass_L_r
VIEW ADARB1_cass_S_f ADARB1_cass_S_r ADARB1_cass_L_f ADARB1_cass_S_r
VIEW ADAR_alt5_S_f ADAR_alt5_S_r ADAR_alt5_L_f ADAR_alt5_L_r
VIEW ADCY6_cass_S_2_f ADCY6_cass_S_r ADCY6_cass_L_1_f ADCY6_cass_L_2_r
VIEW ADD2_cass_S_f ADD2_cass_S_r ADD2_cass_L_1_f ADD2_cass_S_r
VIEW ADD3_cass_S_f ADD3_cass_S_r ADD3_cass_L_f ADD3_cass_S_r
VIEW ADNP_cass_S_f ADNP_cass_S_r ADNP_cass_L_f ADNP_cass_L_r
QPCR Relative Expression Quantification (grouped) : Summary
QPCR Relative Expression Quantification : Summary

Expression Table

ID Name
1 OVN 218 S
2 OVN 262 S
3 OVN 385 S
4 OVN 397 S
5 OVC 189 S
6 OVC 203 S
7 OVC 278 S
8 OVC 328 S
Primer Pair S1 S2 S3 S4 S5 S6 S7 S8
A2BP1_cass_L_f A2BP1_cass_L_1_r 1.000 6.672 0.991 12.367
A2BP1_cass_S_f A2BP1_cass_S_r 1.069 0.931 33.698 5.749 59.915
ABCB9_cass_L_f ABCB9_cass_L_r 1.248 0.583 0.483 1.687 1.115 0.446 3.550
ABCD4_cass_L_2_f ABCD4_cass_L_2_r 1.457 1.113 0.935 0.496 0.367 0.536 0.532 0.599
ABCD4_cass_L_3_f ABCD4_cass_L_3_r 2.027 0.504 1.020 0.449 0.095 0.271 0.152 0.257
ABCD4_cass_S_2_f ABCD4_cass_S_1_r 1.076 0.598 0.997 1.329 0.155 1.183
ABCD4_cass_S_4_f ABCD4_cass_S_3_r 1.395 1.096 0.547 0.963 0.209 0.711 0.710 0.894
ABCG1_alt5_L_f ABCG1_alt5_L_r 1.822 0.783 0.553 0.841 1.598 0.690 0.154
ABCG1_alt5_S_f ABCG1_alt5_S_r 1.649 0.433 0.842 1.076 1.538 0.562 0.159 0.197
ABI1_cass_L_5_f ABI1_cass_L_6_r 1.052 1.053 1.067 0.828 0.209 0.199 0.510 0.494
ABI1_cass_S_3_f ABI1.S.R1 0.615 0.980 1.681 0.724 3.181 2.154 3.218 9.237
ABL2_cass_S_1_f ABL2_cass_L_1_r 1.000
ABL2_cass_S_f ABL2_cass_S_r 0.254 0.055 1.000
ABTB1_alt5_L_f ABTB1_alt5_S_r 0.411 1.682 0.952 0.955 0.238 0.459 0.857
ABTB1_alt5_S_f ABTB1_alt5_S_r 1.317 1.356 0.444 0.884 0.080 0.163 0.534 2.093
ACACA_cass_S_f ACACA_cass_L_r 1.000
ACACA_cass_S_f ACACA_cass_S_r 0.307 1.693 0.302
ACCN3_alt3_L_f ACCN3_alt3_L_r 1.242 0.523 0.424 1.812 0.270
ACCN3_alt3_S_f ACCN3_alt3_S_1_r 0.442 0.962 0.410 2.185 3.948 0.712 4.828
ACOT8_cass_L_1_f ACOT8_cass_L_1_r 1.081 1.038 1.037 0.845 1.436 1.072 0.812
QPCR QPSI (grouped)
QPCR QPSI
QPCR Reference Gene Page : .

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