3. Array-288 -- RBM10 Knockdowns in SKOV-3 and PC-3

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Home Supplementary data Splicing arrays reveal novel RBM10 targets, including SMN2 pre-mRNA 3. Array-288 -- RBM10 Knockdowns in SKOV-3 and PC-3

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https://rnomics.med.usherbrooke.ca/palace?purl=/data/related/2494/gene;rna_source/537948;8026

3. Array-288 -- RBM10 Knockdowns in SKOV-3 and PC-3 ⚙

Transcript map : ADARB1 CTRL PC3 exp38

refseq_ADARB1.F2 / refseq_ADARB1.R2 (CM023786 C13) : Curve | Curve set
refseq_ADARB1.F4 / refseq_ADARB1.R4 (CM023786 O13) : Curve | Curve set

Exon
Length: 194
Transcript: NM_001033049

Exon
Length: 172
Transcript: NM_001033049

Exon
Length: 118
Transcript: NM_001033049

Exon
Length: 75
Transcript: NM_001033049

Exon
Length: 935
Transcript: NM_001033049

Exon
Length: 115
Transcript: NM_001033049

Exon
Length: 169
Transcript: NM_001033049

Exon
Length: 149
Transcript: NM_001033049

Exon
Length: 169
Transcript: NM_001033049

Exon
Length: 182
Transcript: NM_001033049

Exon
Length: 179
Transcript: NM_001033049

Exon
Length: 1560
Transcript: NM_001033049

Exon
Length: 1013
Transcript: NM_001033049

Intron
Length: 53608
Transcript: NM_001033049

Intron
Length: 6141
Transcript: NM_001033049

Intron
Length: 36777
Transcript: NM_001033049

Intron
Length: 4045
Transcript: NM_001033049

Intron
Length: 3665
Transcript: NM_001033049

Intron
Length: 2140
Transcript: NM_001033049

Intron
Length: 608
Transcript: NM_001033049

Intron
Length: 1412
Transcript: NM_001033049

Intron
Length: 19463
Transcript: NM_001033049

Intron
Length: 16099
Transcript: NM_001033049

Intron
Length: 1003
Transcript: NM_001033049

Intron
Length: 1969
Transcript: NM_001033049

Reaction
Expected peak: 112
6M
refseq_ADARB1.F2
refseq_ADARB1.R2

Reaction
Expected peak: 298
10.7M
refseq_ADARB1.F4
refseq_ADARB1.R4

Exon
Length: 194
Transcript: NM_001112

Exon
Length: 172
Transcript: NM_001112

Exon
Length: 75
Transcript: NM_001112

Exon
Length: 935
Transcript: NM_001112

Exon
Length: 115
Transcript: NM_001112

Exon
Length: 169
Transcript: NM_001112

Exon
Length: 149
Transcript: NM_001112

Exon
Length: 169
Transcript: NM_001112

Exon
Length: 182
Transcript: NM_001112

Exon
Length: 179
Transcript: NM_001112

Exon
Length: 4542
Transcript: NM_001112

Intron
Length: 53608
Transcript: NM_001112

Intron
Length: 43036
Transcript: NM_001112

Intron
Length: 4045
Transcript: NM_001112

Intron
Length: 3665
Transcript: NM_001112

Intron
Length: 2140
Transcript: NM_001112

Intron
Length: 608
Transcript: NM_001112

Intron
Length: 1412
Transcript: NM_001112

Intron
Length: 19463
Transcript: NM_001112

Intron
Length: 16099
Transcript: NM_001112

Intron
Length: 1003
Transcript: NM_001112

Reaction
Expected peak: 112
6M
refseq_ADARB1.F2
refseq_ADARB1.R2

Reaction
Expected peak: 180
23.2M
refseq_ADARB1.F4
refseq_ADARB1.R4

Exon
Length: 194
Transcript: NM_015833

Exon
Length: 172
Transcript: NM_015833

Exon
Length: 75
Transcript: NM_015833

Exon
Length: 935
Transcript: NM_015833

Exon
Length: 115
Transcript: NM_015833

Exon
Length: 169
Transcript: NM_015833

Exon
Length: 149
Transcript: NM_015833

Exon
Length: 120
Transcript: NM_015833

Exon
Length: 169
Transcript: NM_015833

Exon
Length: 182
Transcript: NM_015833

Exon
Length: 179
Transcript: NM_015833

Exon
Length: 1560
Transcript: NM_015833

Exon
Length: 1013
Transcript: NM_015833

Intron
Length: 53608
Transcript: NM_015833

Intron
Length: 43036
Transcript: NM_015833

Intron
Length: 4045
Transcript: NM_015833

Intron
Length: 3665
Transcript: NM_015833

Intron
Length: 2140
Transcript: NM_015833

Intron
Length: 608
Transcript: NM_015833

Intron
Length: 963
Transcript: NM_015833

Intron
Length: 329
Transcript: NM_015833

Intron
Length: 19463
Transcript: NM_015833

Intron
Length: 16099
Transcript: NM_015833

Intron
Length: 1003
Transcript: NM_015833

Intron
Length: 1969
Transcript: NM_015833

Reaction
Expected peak: 232
24.5M
refseq_ADARB1.F2
refseq_ADARB1.R2

Reaction
Expected peak: 180
23.2M
refseq_ADARB1.F4
refseq_ADARB1.R4

Exon
Length: 194
Transcript: NM_015834

Exon
Length: 172
Transcript: NM_015834

Exon
Length: 75
Transcript: NM_015834

Exon
Length: 935
Transcript: NM_015834

Exon
Length: 115
Transcript: NM_015834

Exon
Length: 169
Transcript: NM_015834

Exon
Length: 149
Transcript: NM_015834

Exon
Length: 120
Transcript: NM_015834

Exon
Length: 169
Transcript: NM_015834

Exon
Length: 182
Transcript: NM_015834

Exon
Length: 179
Transcript: NM_015834

Exon
Length: 90
Transcript: NM_015834

Exon
Length: 1013
Transcript: NM_015834

Intron
Length: 53608
Transcript: NM_015834

Intron
Length: 43036
Transcript: NM_015834

Intron
Length: 4045
Transcript: NM_015834

Intron
Length: 3665
Transcript: NM_015834

Intron
Length: 2140
Transcript: NM_015834

Intron
Length: 608
Transcript: NM_015834

Intron
Length: 963
Transcript: NM_015834

Intron
Length: 329
Transcript: NM_015834

Intron
Length: 19463
Transcript: NM_015834

Intron
Length: 16099
Transcript: NM_015834

Intron
Length: 1003
Transcript: NM_015834

Intron
Length: 3439
Transcript: NM_015834

Reaction
Expected peak: 232
24.5M
refseq_ADARB1.F2
refseq_ADARB1.R2

Reaction
Expected peak: 180
23.2M
refseq_ADARB1.F4
refseq_ADARB1.R4

refseq_ADARB1.F2
ACATGAGCCAATCCTGGAAG

refseq_ADARB1.R2
ATTGGAGCGCACTGGAATC

refseq_ADARB1.F4
CTGGCATGGAGAGCTTAAGG

refseq_ADARB1.R4
TTGACTGGCGGAGACTGTTT