3. Array-288 -- RBM10 Knockdowns in SKOV-3 and PC-3

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Home Supplementary data Splicing arrays reveal novel RBM10 targets, including SMN2 pre-mRNA 3. Array-288 -- RBM10 Knockdowns in SKOV-3 and PC-3

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https://rnomics.med.usherbrooke.ca/palace?purl=/data/related/2494/gene;rna_source/891729;8026

3. Array-288 -- RBM10 Knockdowns in SKOV-3 and PC-3 ⚙

Transcript map : ABCC1 CTRL PC3 exp38

rs.ABCC1.F2 / rs.ABCC1.R2 (CM023790 E15) : Curve | Curve set
rs.ABCC1.F3 / rs.ABCC1.R3 (CM024258 I9) : Curve | Curve set

Exon
Length: 223
Transcript: NM_004996

Exon
Length: 177
Transcript: NM_004996

Exon
Length: 126
Transcript: NM_004996

Exon
Length: 138
Transcript: NM_004996

Exon
Length: 126
Transcript: NM_004996

Exon
Length: 62
Transcript: NM_004996

Exon
Length: 132
Transcript: NM_004996

Exon
Length: 231
Transcript: NM_004996

Exon
Length: 178
Transcript: NM_004996

Exon
Length: 162
Transcript: NM_004996

Exon
Length: 93
Transcript: NM_004996

Exon
Length: 204
Transcript: NM_004996

Exon
Length: 147
Transcript: NM_004996

Exon
Length: 88
Transcript: NM_004996

Exon
Length: 76
Transcript: NM_004996

Exon
Length: 127
Transcript: NM_004996

Exon
Length: 177
Transcript: NM_004996

Exon
Length: 168
Transcript: NM_004996

Exon
Length: 184
Transcript: NM_004996

Exon
Length: 91
Transcript: NM_004996

Exon
Length: 136
Transcript: NM_004996

Exon
Length: 208
Transcript: NM_004996

Exon
Length: 311
Transcript: NM_004996

Exon
Length: 200
Transcript: NM_004996

Exon
Length: 127
Transcript: NM_004996

Exon
Length: 102
Transcript: NM_004996

Exon
Length: 147
Transcript: NM_004996

Exon
Length: 159
Transcript: NM_004996

Exon
Length: 167
Transcript: NM_004996

Exon
Length: 195
Transcript: NM_004996

Exon
Length: 1902
Transcript: NM_004996

Intron
Length: 58016
Transcript: NM_004996

Intron
Length: 1783
Transcript: NM_004996

Intron
Length: 4589
Transcript: NM_004996

Intron
Length: 1867
Transcript: NM_004996

Intron
Length: 16487
Transcript: NM_004996

Intron
Length: 3301
Transcript: NM_004996

Intron
Length: 7846
Transcript: NM_004996

Intron
Length: 1155
Transcript: NM_004996

Intron
Length: 2128
Transcript: NM_004996

Intron
Length: 4420
Transcript: NM_004996

Intron
Length: 3275
Transcript: NM_004996

Intron
Length: 11860
Transcript: NM_004996

Intron
Length: 3339
Transcript: NM_004996

Intron
Length: 4596
Transcript: NM_004996

Intron
Length: 2950
Transcript: NM_004996

Intron
Length: 3887
Transcript: NM_004996

Intron
Length: 3281
Transcript: NM_004996

Intron
Length: 3413
Transcript: NM_004996

Intron
Length: 12038
Transcript: NM_004996

Intron
Length: 4020
Transcript: NM_004996

Intron
Length: 4501
Transcript: NM_004996

Intron
Length: 3183
Transcript: NM_004996

Intron
Length: 6898
Transcript: NM_004996

Intron
Length: 2614
Transcript: NM_004996

Intron
Length: 894
Transcript: NM_004996

Intron
Length: 5877
Transcript: NM_004996

Intron
Length: 2414
Transcript: NM_004996

Intron
Length: 1969
Transcript: NM_004996

Intron
Length: 1719
Transcript: NM_004996

Intron
Length: 2614
Transcript: NM_004996

Reaction
Expected peak: 296
180.3M
rs.ABCC1.F2
rs.ABCC1.R2

Reaction
Expected peak: 340
65.2M
rs.ABCC1.F3
rs.ABCC1.R3

Exon
Length: 223
Transcript: NM_019862

Exon
Length: 177
Transcript: NM_019862

Exon
Length: 126
Transcript: NM_019862

Exon
Length: 138
Transcript: NM_019862

Exon
Length: 126
Transcript: NM_019862

Exon
Length: 62
Transcript: NM_019862

Exon
Length: 132
Transcript: NM_019862

Exon
Length: 231
Transcript: NM_019862

Exon
Length: 178
Transcript: NM_019862

Exon
Length: 162
Transcript: NM_019862

Exon
Length: 93
Transcript: NM_019862

Exon
Length: 204
Transcript: NM_019862

Exon
Length: 147
Transcript: NM_019862

Exon
Length: 88
Transcript: NM_019862

Exon
Length: 76
Transcript: NM_019862

Exon
Length: 127
Transcript: NM_019862

Exon
Length: 168
Transcript: NM_019862

Exon
Length: 184
Transcript: NM_019862

Exon
Length: 91
Transcript: NM_019862

Exon
Length: 136
Transcript: NM_019862

Exon
Length: 208
Transcript: NM_019862

Exon
Length: 311
Transcript: NM_019862

Exon
Length: 200
Transcript: NM_019862

Exon
Length: 127
Transcript: NM_019862

Exon
Length: 102
Transcript: NM_019862

Exon
Length: 147
Transcript: NM_019862

Exon
Length: 159
Transcript: NM_019862

Exon
Length: 167
Transcript: NM_019862

Exon
Length: 195
Transcript: NM_019862

Exon
Length: 1902
Transcript: NM_019862

Intron
Length: 58016
Transcript: NM_019862

Intron
Length: 1783
Transcript: NM_019862

Intron
Length: 4589
Transcript: NM_019862

Intron
Length: 1867
Transcript: NM_019862

Intron
Length: 16487
Transcript: NM_019862

Intron
Length: 3301
Transcript: NM_019862

Intron
Length: 7846
Transcript: NM_019862

Intron
Length: 1155
Transcript: NM_019862

Intron
Length: 2128
Transcript: NM_019862

Intron
Length: 4420
Transcript: NM_019862

Intron
Length: 3275
Transcript: NM_019862

Intron
Length: 11860
Transcript: NM_019862

Intron
Length: 3339
Transcript: NM_019862

Intron
Length: 4596
Transcript: NM_019862

Intron
Length: 2950
Transcript: NM_019862

Intron
Length: 7345
Transcript: NM_019862

Intron
Length: 3413
Transcript: NM_019862

Intron
Length: 12038
Transcript: NM_019862

Intron
Length: 4020
Transcript: NM_019862

Intron
Length: 4501
Transcript: NM_019862

Intron
Length: 3183
Transcript: NM_019862

Intron
Length: 6898
Transcript: NM_019862

Intron
Length: 2614
Transcript: NM_019862

Intron
Length: 894
Transcript: NM_019862

Intron
Length: 5877
Transcript: NM_019862

Intron
Length: 2414
Transcript: NM_019862

Intron
Length: 1969
Transcript: NM_019862

Intron
Length: 1719
Transcript: NM_019862

Intron
Length: 2614
Transcript: NM_019862

Reaction
Expected peak: 119
46.8M
rs.ABCC1.F2
rs.ABCC1.R2

Exon
Length: 223
Transcript: NM_019898

Exon
Length: 177
Transcript: NM_019898

Exon
Length: 126
Transcript: NM_019898

Exon
Length: 138
Transcript: NM_019898

Exon
Length: 126
Transcript: NM_019898

Exon
Length: 62
Transcript: NM_019898

Exon
Length: 132
Transcript: NM_019898

Exon
Length: 231
Transcript: NM_019898

Exon
Length: 178
Transcript: NM_019898

Exon
Length: 162
Transcript: NM_019898

Exon
Length: 93
Transcript: NM_019898

Exon
Length: 204
Transcript: NM_019898

Exon
Length: 147
Transcript: NM_019898

Exon
Length: 88
Transcript: NM_019898

Exon
Length: 76
Transcript: NM_019898

Exon
Length: 127
Transcript: NM_019898

Exon
Length: 177
Transcript: NM_019898

Exon
Length: 184
Transcript: NM_019898

Exon
Length: 91
Transcript: NM_019898

Exon
Length: 136
Transcript: NM_019898

Exon
Length: 208
Transcript: NM_019898

Exon
Length: 311
Transcript: NM_019898

Exon
Length: 200
Transcript: NM_019898

Exon
Length: 127
Transcript: NM_019898

Exon
Length: 102
Transcript: NM_019898

Exon
Length: 147
Transcript: NM_019898

Exon
Length: 159
Transcript: NM_019898

Exon
Length: 167
Transcript: NM_019898

Exon
Length: 195
Transcript: NM_019898

Exon
Length: 1902
Transcript: NM_019898

Intron
Length: 58016
Transcript: NM_019898

Intron
Length: 1783
Transcript: NM_019898

Intron
Length: 4589
Transcript: NM_019898

Intron
Length: 1867
Transcript: NM_019898

Intron
Length: 16487
Transcript: NM_019898

Intron
Length: 3301
Transcript: NM_019898

Intron
Length: 7846
Transcript: NM_019898

Intron
Length: 1155
Transcript: NM_019898

Intron
Length: 2128
Transcript: NM_019898

Intron
Length: 4420
Transcript: NM_019898

Intron
Length: 3275
Transcript: NM_019898

Intron
Length: 11860
Transcript: NM_019898

Intron
Length: 3339
Transcript: NM_019898

Intron
Length: 4596
Transcript: NM_019898

Intron
Length: 2950
Transcript: NM_019898

Intron
Length: 3887
Transcript: NM_019898

Intron
Length: 6862
Transcript: NM_019898

Intron
Length: 12038
Transcript: NM_019898

Intron
Length: 4020
Transcript: NM_019898

Intron
Length: 4501
Transcript: NM_019898

Intron
Length: 3183
Transcript: NM_019898

Intron
Length: 6898
Transcript: NM_019898

Intron
Length: 2614
Transcript: NM_019898

Intron
Length: 894
Transcript: NM_019898

Intron
Length: 5877
Transcript: NM_019898

Intron
Length: 2414
Transcript: NM_019898

Intron
Length: 1969
Transcript: NM_019898

Intron
Length: 1719
Transcript: NM_019898

Intron
Length: 2614
Transcript: NM_019898

Reaction
Expected peak: 172
2.4M
rs.ABCC1.F3
rs.ABCC1.R3

Exon
Length: 223
Transcript: NM_019899

Exon
Length: 177
Transcript: NM_019899

Exon
Length: 126
Transcript: NM_019899

Exon
Length: 138
Transcript: NM_019899

Exon
Length: 126
Transcript: NM_019899

Exon
Length: 62
Transcript: NM_019899

Exon
Length: 132
Transcript: NM_019899

Exon
Length: 231
Transcript: NM_019899

Exon
Length: 178
Transcript: NM_019899

Exon
Length: 162
Transcript: NM_019899

Exon
Length: 93
Transcript: NM_019899

Exon
Length: 204
Transcript: NM_019899

Exon
Length: 147
Transcript: NM_019899

Exon
Length: 88
Transcript: NM_019899

Exon
Length: 76
Transcript: NM_019899

Exon
Length: 127
Transcript: NM_019899

Exon
Length: 184
Transcript: NM_019899

Exon
Length: 91
Transcript: NM_019899

Exon
Length: 136
Transcript: NM_019899

Exon
Length: 208
Transcript: NM_019899

Exon
Length: 311
Transcript: NM_019899

Exon
Length: 200
Transcript: NM_019899

Exon
Length: 127
Transcript: NM_019899

Exon
Length: 102
Transcript: NM_019899

Exon
Length: 147
Transcript: NM_019899

Exon
Length: 159
Transcript: NM_019899

Exon
Length: 167
Transcript: NM_019899

Exon
Length: 195
Transcript: NM_019899

Exon
Length: 1902
Transcript: NM_019899

Intron
Length: 58016
Transcript: NM_019899

Intron
Length: 1783
Transcript: NM_019899

Intron
Length: 4589
Transcript: NM_019899

Intron
Length: 1867
Transcript: NM_019899

Intron
Length: 16487
Transcript: NM_019899

Intron
Length: 3301
Transcript: NM_019899

Intron
Length: 7846
Transcript: NM_019899

Intron
Length: 1155
Transcript: NM_019899

Intron
Length: 2128
Transcript: NM_019899

Intron
Length: 4420
Transcript: NM_019899

Intron
Length: 3275
Transcript: NM_019899

Intron
Length: 11860
Transcript: NM_019899

Intron
Length: 3339
Transcript: NM_019899

Intron
Length: 4596
Transcript: NM_019899

Intron
Length: 2950
Transcript: NM_019899

Intron
Length: 10926
Transcript: NM_019899

Intron
Length: 12038
Transcript: NM_019899

Intron
Length: 4020
Transcript: NM_019899

Intron
Length: 4501
Transcript: NM_019899

Intron
Length: 3183
Transcript: NM_019899

Intron
Length: 6898
Transcript: NM_019899

Intron
Length: 2614
Transcript: NM_019899

Intron
Length: 894
Transcript: NM_019899

Intron
Length: 5877
Transcript: NM_019899

Intron
Length: 2414
Transcript: NM_019899

Intron
Length: 1969
Transcript: NM_019899

Intron
Length: 1719
Transcript: NM_019899

Intron
Length: 2614
Transcript: NM_019899

Exon
Length: 223
Transcript: NM_019900

Exon
Length: 177
Transcript: NM_019900

Exon
Length: 126
Transcript: NM_019900

Exon
Length: 138
Transcript: NM_019900

Exon
Length: 126
Transcript: NM_019900

Exon
Length: 62
Transcript: NM_019900

Exon
Length: 132
Transcript: NM_019900

Exon
Length: 231
Transcript: NM_019900

Exon
Length: 178
Transcript: NM_019900

Exon
Length: 162
Transcript: NM_019900

Exon
Length: 93
Transcript: NM_019900

Exon
Length: 204
Transcript: NM_019900

Exon
Length: 147
Transcript: NM_019900

Exon
Length: 88
Transcript: NM_019900

Exon
Length: 76
Transcript: NM_019900

Exon
Length: 127
Transcript: NM_019900

Exon
Length: 177
Transcript: NM_019900

Exon
Length: 168
Transcript: NM_019900

Exon
Length: 184
Transcript: NM_019900

Exon
Length: 91
Transcript: NM_019900

Exon
Length: 136
Transcript: NM_019900

Exon
Length: 208
Transcript: NM_019900

Exon
Length: 311
Transcript: NM_019900

Exon
Length: 200
Transcript: NM_019900

Exon
Length: 127
Transcript: NM_019900

Exon
Length: 102
Transcript: NM_019900

Exon
Length: 147
Transcript: NM_019900

Exon
Length: 159
Transcript: NM_019900

Exon
Length: 167
Transcript: NM_019900

Exon
Length: 1902
Transcript: NM_019900

Intron
Length: 58016
Transcript: NM_019900

Intron
Length: 1783
Transcript: NM_019900

Intron
Length: 4589
Transcript: NM_019900

Intron
Length: 1867
Transcript: NM_019900

Intron
Length: 16487
Transcript: NM_019900

Intron
Length: 3301
Transcript: NM_019900

Intron
Length: 7846
Transcript: NM_019900

Intron
Length: 1155
Transcript: NM_019900

Intron
Length: 2128
Transcript: NM_019900

Intron
Length: 4420
Transcript: NM_019900

Intron
Length: 3275
Transcript: NM_019900

Intron
Length: 11860
Transcript: NM_019900

Intron
Length: 3339
Transcript: NM_019900

Intron
Length: 4596
Transcript: NM_019900

Intron
Length: 2950
Transcript: NM_019900

Intron
Length: 3887
Transcript: NM_019900

Intron
Length: 3281
Transcript: NM_019900

Intron
Length: 3413
Transcript: NM_019900

Intron
Length: 12038
Transcript: NM_019900

Intron
Length: 4020
Transcript: NM_019900

Intron
Length: 4501
Transcript: NM_019900

Intron
Length: 3183
Transcript: NM_019900

Intron
Length: 6898
Transcript: NM_019900

Intron
Length: 2614
Transcript: NM_019900

Intron
Length: 894
Transcript: NM_019900

Intron
Length: 5877
Transcript: NM_019900

Intron
Length: 2414
Transcript: NM_019900

Intron
Length: 1969
Transcript: NM_019900

Intron
Length: 4528
Transcript: NM_019900

Reaction
Expected peak: 296
180.3M
rs.ABCC1.F2
rs.ABCC1.R2

Reaction
Expected peak: 340
65.2M
rs.ABCC1.F3
rs.ABCC1.R3

rs.ABCC1.R2
TCGAAGAGGTAAATGTCAGCGT

rs.ABCC1.F2
GAGATGGACAAAGTGGAGGGGC

rs.ABCC1.F3
CGGACAGAGATTGGCGAGAAG

rs.ABCC1.R3
TGGCATAGGTACGCAGGAACTC