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LGFUS Public Data
Identification of alternative splicing markers for breast cancer
2. Breast Validation Screen
Transcript map
: EPHA2
Exon
Length: 240
Transcript: EPHA2.aAug05
Length: 240
Transcript: EPHA2.aAug05
Exon
Length: 68
Transcript: EPHA2.aAug05
Length: 68
Transcript: EPHA2.aAug05
Exon
Length: 670
Transcript: EPHA2.aAug05
Length: 670
Transcript: EPHA2.aAug05
Exon
Length: 156
Transcript: EPHA2.aAug05
Length: 156
Transcript: EPHA2.aAug05
Exon
Length: 333
Transcript: EPHA2.aAug05
Length: 333
Transcript: EPHA2.aAug05
Exon
Length: 116
Transcript: EPHA2.aAug05
Length: 116
Transcript: EPHA2.aAug05
Exon
Length: 154
Transcript: EPHA2.aAug05
Length: 154
Transcript: EPHA2.aAug05
Exon
Length: 100
Transcript: EPHA2.aAug05
Length: 100
Transcript: EPHA2.aAug05
Exon
Length: 56
Transcript: EPHA2.aAug05
Length: 56
Transcript: EPHA2.aAug05
Exon
Length: 126
Transcript: EPHA2.aAug05
Length: 126
Transcript: EPHA2.aAug05
Exon
Length: 189
Transcript: EPHA2.aAug05
Length: 189
Transcript: EPHA2.aAug05
Exon
Length: 62
Transcript: EPHA2.aAug05
Length: 62
Transcript: EPHA2.aAug05
Exon
Length: 210
Transcript: EPHA2.aAug05
Length: 210
Transcript: EPHA2.aAug05
Exon
Length: 150
Transcript: EPHA2.aAug05
Length: 150
Transcript: EPHA2.aAug05
Exon
Length: 194
Transcript: EPHA2.aAug05
Length: 194
Transcript: EPHA2.aAug05
Exon
Length: 156
Transcript: EPHA2.aAug05
Length: 156
Transcript: EPHA2.aAug05
Exon
Length: 986
Transcript: EPHA2.aAug05
Length: 986
Transcript: EPHA2.aAug05
Intron
Length: 4884
Transcript: EPHA2.aAug05
Length: 4884
Transcript: EPHA2.aAug05
Intron
Length: 1848
Transcript: EPHA2.aAug05
Length: 1848
Transcript: EPHA2.aAug05
Intron
Length: 9947
Transcript: EPHA2.aAug05
Length: 9947
Transcript: EPHA2.aAug05
Intron
Length: 89
Transcript: EPHA2.aAug05
Length: 89
Transcript: EPHA2.aAug05
Intron
Length: 2082
Transcript: EPHA2.aAug05
Length: 2082
Transcript: EPHA2.aAug05
Intron
Length: 465
Transcript: EPHA2.aAug05
Length: 465
Transcript: EPHA2.aAug05
Intron
Length: 468
Transcript: EPHA2.aAug05
Length: 468
Transcript: EPHA2.aAug05
Intron
Length: 552
Transcript: EPHA2.aAug05
Length: 552
Transcript: EPHA2.aAug05
Intron
Length: 253
Transcript: EPHA2.aAug05
Length: 253
Transcript: EPHA2.aAug05
Intron
Length: 112
Transcript: EPHA2.aAug05
Length: 112
Transcript: EPHA2.aAug05
Intron
Length: 740
Transcript: EPHA2.aAug05
Length: 740
Transcript: EPHA2.aAug05
Intron
Length: 104
Transcript: EPHA2.aAug05
Length: 104
Transcript: EPHA2.aAug05
Intron
Length: 193
Transcript: EPHA2.aAug05
Length: 193
Transcript: EPHA2.aAug05
Intron
Length: 1301
Transcript: EPHA2.aAug05
Length: 1301
Transcript: EPHA2.aAug05
Intron
Length: 636
Transcript: EPHA2.aAug05
Length: 636
Transcript: EPHA2.aAug05
Intron
Length: 4113
Transcript: EPHA2.aAug05
Length: 4113
Transcript: EPHA2.aAug05
Reaction
Expected peak: 244
Associated peak: 258,259,260,261,262
Repeated 51 time
Molarity: 2.59M
Forward: EPHA2.u.f.1
Reverse: EPHA2.u.r.2
Expected peak: 244
Associated peak: 258,259,260,261,262
Repeated 51 time
Molarity: 2.59M
Forward: EPHA2.u.f.1
Reverse: EPHA2.u.r.2
Exon
Length: 213
Transcript: EPHA2.bAug05
Length: 213
Transcript: EPHA2.bAug05
Exon
Length: 1160
Transcript: EPHA2.bAug05
Length: 1160
Transcript: EPHA2.bAug05
Intron
Length: 6800
Transcript: EPHA2.bAug05
Length: 6800
Transcript: EPHA2.bAug05
Reaction
Expected peak: 176
Associated peak: 191,192,193,194
Repeated 51 time
Molarity: 0.74M
Forward: EPHA2.u.f.1
Reverse: EPHA2.u.r.2
Expected peak: 176
Associated peak: 191,192,193,194
Repeated 51 time
Molarity: 0.74M
Forward: EPHA2.u.f.1
Reverse: EPHA2.u.r.2
Exon
Length: 28
Transcript: EPHA2.cAug05
Length: 28
Transcript: EPHA2.cAug05
Exon
Length: 156
Transcript: EPHA2.cAug05
Length: 156
Transcript: EPHA2.cAug05
Exon
Length: 333
Transcript: EPHA2.cAug05
Length: 333
Transcript: EPHA2.cAug05
Exon
Length: 116
Transcript: EPHA2.cAug05
Length: 116
Transcript: EPHA2.cAug05
Exon
Length: 153
Transcript: EPHA2.cAug05
Length: 153
Transcript: EPHA2.cAug05
Intron
Length: 7992
Transcript: EPHA2.cAug05
Length: 7992
Transcript: EPHA2.cAug05
Intron
Length: 89
Transcript: EPHA2.cAug05
Length: 89
Transcript: EPHA2.cAug05
Intron
Length: 2082
Transcript: EPHA2.cAug05
Length: 2082
Transcript: EPHA2.cAug05
Intron
Length: 465
Transcript: EPHA2.cAug05
Length: 465
Transcript: EPHA2.cAug05
Exon
Length: 76
Transcript: EPHA2.dAug05
Length: 76
Transcript: EPHA2.dAug05
Exon
Length: 333
Transcript: EPHA2.dAug05
Length: 333
Transcript: EPHA2.dAug05
Exon
Length: 123
Transcript: EPHA2.dAug05
Length: 123
Transcript: EPHA2.dAug05
Intron
Length: 89
Transcript: EPHA2.dAug05
Length: 89
Transcript: EPHA2.dAug05
Intron
Length: 1261
Transcript: EPHA2.dAug05
Length: 1261
Transcript: EPHA2.dAug05
Exon
Length: 82
Transcript: EPHA2.eAug05
Length: 82
Transcript: EPHA2.eAug05
Exon
Length: 372
Transcript: EPHA2.eAug05
Length: 372
Transcript: EPHA2.eAug05
Intron
Length: 112
Transcript: EPHA2.eAug05
Length: 112
Transcript: EPHA2.eAug05
EPHA2.u.r.2
ATCACGTTGCACACGGAGTA
ATCACGTTGCACACGGAGTA
EPHA2.u.f.1
ATCGGACCGAGAGCGAG
ATCGGACCGAGAGCGAG