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LGFUS Public Data
Identification of alternative splicing markers for breast cancer
2. Breast Validation Screen
Transcript map
: PIK3CD
Exon
Length: 83
Transcript: PIK3CD.aAug05
Length: 83
Transcript: PIK3CD.aAug05
Exon
Length: 173
Transcript: PIK3CD.aAug05
Length: 173
Transcript: PIK3CD.aAug05
Exon
Length: 229
Transcript: PIK3CD.aAug05
Length: 229
Transcript: PIK3CD.aAug05
Exon
Length: 230
Transcript: PIK3CD.aAug05
Length: 230
Transcript: PIK3CD.aAug05
Exon
Length: 180
Transcript: PIK3CD.aAug05
Length: 180
Transcript: PIK3CD.aAug05
Exon
Length: 45
Transcript: PIK3CD.aAug05
Length: 45
Transcript: PIK3CD.aAug05
Exon
Length: 90
Transcript: PIK3CD.aAug05
Length: 90
Transcript: PIK3CD.aAug05
Exon
Length: 222
Transcript: PIK3CD.aAug05
Length: 222
Transcript: PIK3CD.aAug05
Exon
Length: 97
Transcript: PIK3CD.aAug05
Length: 97
Transcript: PIK3CD.aAug05
Exon
Length: 131
Transcript: PIK3CD.aAug05
Length: 131
Transcript: PIK3CD.aAug05
Exon
Length: 228
Transcript: PIK3CD.aAug05
Length: 228
Transcript: PIK3CD.aAug05
Exon
Length: 168
Transcript: PIK3CD.aAug05
Length: 168
Transcript: PIK3CD.aAug05
Exon
Length: 122
Transcript: PIK3CD.aAug05
Length: 122
Transcript: PIK3CD.aAug05
Exon
Length: 144
Transcript: PIK3CD.aAug05
Length: 144
Transcript: PIK3CD.aAug05
Exon
Length: 100
Transcript: PIK3CD.aAug05
Length: 100
Transcript: PIK3CD.aAug05
Exon
Length: 179
Transcript: PIK3CD.aAug05
Length: 179
Transcript: PIK3CD.aAug05
Exon
Length: 113
Transcript: PIK3CD.aAug05
Length: 113
Transcript: PIK3CD.aAug05
Exon
Length: 79
Transcript: PIK3CD.aAug05
Length: 79
Transcript: PIK3CD.aAug05
Exon
Length: 168
Transcript: PIK3CD.aAug05
Length: 168
Transcript: PIK3CD.aAug05
Exon
Length: 124
Transcript: PIK3CD.aAug05
Length: 124
Transcript: PIK3CD.aAug05
Exon
Length: 146
Transcript: PIK3CD.aAug05
Length: 146
Transcript: PIK3CD.aAug05
Exon
Length: 133
Transcript: PIK3CD.aAug05
Length: 133
Transcript: PIK3CD.aAug05
Exon
Length: 319
Transcript: PIK3CD.aAug05
Length: 319
Transcript: PIK3CD.aAug05
Intron
Length: 143
Transcript: PIK3CD.aAug05
Length: 143
Transcript: PIK3CD.aAug05
Intron
Length: 4944
Transcript: PIK3CD.aAug05
Length: 4944
Transcript: PIK3CD.aAug05
Intron
Length: 79
Transcript: PIK3CD.aAug05
Length: 79
Transcript: PIK3CD.aAug05
Intron
Length: 361
Transcript: PIK3CD.aAug05
Length: 361
Transcript: PIK3CD.aAug05
Intron
Length: 444
Transcript: PIK3CD.aAug05
Length: 444
Transcript: PIK3CD.aAug05
Intron
Length: 428
Transcript: PIK3CD.aAug05
Length: 428
Transcript: PIK3CD.aAug05
Intron
Length: 1067
Transcript: PIK3CD.aAug05
Length: 1067
Transcript: PIK3CD.aAug05
Intron
Length: 1005
Transcript: PIK3CD.aAug05
Length: 1005
Transcript: PIK3CD.aAug05
Intron
Length: 94
Transcript: PIK3CD.aAug05
Length: 94
Transcript: PIK3CD.aAug05
Intron
Length: 191
Transcript: PIK3CD.aAug05
Length: 191
Transcript: PIK3CD.aAug05
Intron
Length: 80
Transcript: PIK3CD.aAug05
Length: 80
Transcript: PIK3CD.aAug05
Intron
Length: 217
Transcript: PIK3CD.aAug05
Length: 217
Transcript: PIK3CD.aAug05
Intron
Length: 195
Transcript: PIK3CD.aAug05
Length: 195
Transcript: PIK3CD.aAug05
Intron
Length: 173
Transcript: PIK3CD.aAug05
Length: 173
Transcript: PIK3CD.aAug05
Intron
Length: 114
Transcript: PIK3CD.aAug05
Length: 114
Transcript: PIK3CD.aAug05
Intron
Length: 90
Transcript: PIK3CD.aAug05
Length: 90
Transcript: PIK3CD.aAug05
Intron
Length: 171
Transcript: PIK3CD.aAug05
Length: 171
Transcript: PIK3CD.aAug05
Intron
Length: 518
Transcript: PIK3CD.aAug05
Length: 518
Transcript: PIK3CD.aAug05
Intron
Length: 676
Transcript: PIK3CD.aAug05
Length: 676
Transcript: PIK3CD.aAug05
Intron
Length: 183
Transcript: PIK3CD.aAug05
Length: 183
Transcript: PIK3CD.aAug05
Intron
Length: 382
Transcript: PIK3CD.aAug05
Length: 382
Transcript: PIK3CD.aAug05
Intron
Length: 1972
Transcript: PIK3CD.aAug05
Length: 1972
Transcript: PIK3CD.aAug05
Exon
Length: 59
Transcript: PIK3CD.bAug05
Length: 59
Transcript: PIK3CD.bAug05
Exon
Length: 105
Transcript: PIK3CD.bAug05
Length: 105
Transcript: PIK3CD.bAug05
Exon
Length: 173
Transcript: PIK3CD.bAug05
Length: 173
Transcript: PIK3CD.bAug05
Exon
Length: 229
Transcript: PIK3CD.bAug05
Length: 229
Transcript: PIK3CD.bAug05
Exon
Length: 230
Transcript: PIK3CD.bAug05
Length: 230
Transcript: PIK3CD.bAug05
Exon
Length: 180
Transcript: PIK3CD.bAug05
Length: 180
Transcript: PIK3CD.bAug05
Exon
Length: 150
Transcript: PIK3CD.bAug05
Length: 150
Transcript: PIK3CD.bAug05
Exon
Length: 90
Transcript: PIK3CD.bAug05
Length: 90
Transcript: PIK3CD.bAug05
Exon
Length: 222
Transcript: PIK3CD.bAug05
Length: 222
Transcript: PIK3CD.bAug05
Exon
Length: 97
Transcript: PIK3CD.bAug05
Length: 97
Transcript: PIK3CD.bAug05
Exon
Length: 131
Transcript: PIK3CD.bAug05
Length: 131
Transcript: PIK3CD.bAug05
Exon
Length: 51
Transcript: PIK3CD.bAug05
Length: 51
Transcript: PIK3CD.bAug05
Exon
Length: 168
Transcript: PIK3CD.bAug05
Length: 168
Transcript: PIK3CD.bAug05
Exon
Length: 122
Transcript: PIK3CD.bAug05
Length: 122
Transcript: PIK3CD.bAug05
Exon
Length: 144
Transcript: PIK3CD.bAug05
Length: 144
Transcript: PIK3CD.bAug05
Exon
Length: 100
Transcript: PIK3CD.bAug05
Length: 100
Transcript: PIK3CD.bAug05
Exon
Length: 179
Transcript: PIK3CD.bAug05
Length: 179
Transcript: PIK3CD.bAug05
Exon
Length: 113
Transcript: PIK3CD.bAug05
Length: 113
Transcript: PIK3CD.bAug05
Exon
Length: 79
Transcript: PIK3CD.bAug05
Length: 79
Transcript: PIK3CD.bAug05
Exon
Length: 168
Transcript: PIK3CD.bAug05
Length: 168
Transcript: PIK3CD.bAug05
Exon
Length: 124
Transcript: PIK3CD.bAug05
Length: 124
Transcript: PIK3CD.bAug05
Exon
Length: 146
Transcript: PIK3CD.bAug05
Length: 146
Transcript: PIK3CD.bAug05
Exon
Length: 133
Transcript: PIK3CD.bAug05
Length: 133
Transcript: PIK3CD.bAug05
Exon
Length: 3796
Transcript: PIK3CD.bAug05
Length: 3796
Transcript: PIK3CD.bAug05
Intron
Length: 39664
Transcript: PIK3CD.bAug05
Length: 39664
Transcript: PIK3CD.bAug05
Intron
Length: 18852
Transcript: PIK3CD.bAug05
Length: 18852
Transcript: PIK3CD.bAug05
Intron
Length: 4944
Transcript: PIK3CD.bAug05
Length: 4944
Transcript: PIK3CD.bAug05
Intron
Length: 79
Transcript: PIK3CD.bAug05
Length: 79
Transcript: PIK3CD.bAug05
Intron
Length: 361
Transcript: PIK3CD.bAug05
Length: 361
Transcript: PIK3CD.bAug05
Intron
Length: 339
Transcript: PIK3CD.bAug05
Length: 339
Transcript: PIK3CD.bAug05
Intron
Length: 428
Transcript: PIK3CD.bAug05
Length: 428
Transcript: PIK3CD.bAug05
Intron
Length: 1067
Transcript: PIK3CD.bAug05
Length: 1067
Transcript: PIK3CD.bAug05
Intron
Length: 1005
Transcript: PIK3CD.bAug05
Length: 1005
Transcript: PIK3CD.bAug05
Intron
Length: 94
Transcript: PIK3CD.bAug05
Length: 94
Transcript: PIK3CD.bAug05
Intron
Length: 368
Transcript: PIK3CD.bAug05
Length: 368
Transcript: PIK3CD.bAug05
Intron
Length: 80
Transcript: PIK3CD.bAug05
Length: 80
Transcript: PIK3CD.bAug05
Intron
Length: 217
Transcript: PIK3CD.bAug05
Length: 217
Transcript: PIK3CD.bAug05
Intron
Length: 195
Transcript: PIK3CD.bAug05
Length: 195
Transcript: PIK3CD.bAug05
Intron
Length: 173
Transcript: PIK3CD.bAug05
Length: 173
Transcript: PIK3CD.bAug05
Intron
Length: 114
Transcript: PIK3CD.bAug05
Length: 114
Transcript: PIK3CD.bAug05
Intron
Length: 90
Transcript: PIK3CD.bAug05
Length: 90
Transcript: PIK3CD.bAug05
Intron
Length: 171
Transcript: PIK3CD.bAug05
Length: 171
Transcript: PIK3CD.bAug05
Intron
Length: 518
Transcript: PIK3CD.bAug05
Length: 518
Transcript: PIK3CD.bAug05
Intron
Length: 676
Transcript: PIK3CD.bAug05
Length: 676
Transcript: PIK3CD.bAug05
Intron
Length: 183
Transcript: PIK3CD.bAug05
Length: 183
Transcript: PIK3CD.bAug05
Intron
Length: 382
Transcript: PIK3CD.bAug05
Length: 382
Transcript: PIK3CD.bAug05
Intron
Length: 1972
Transcript: PIK3CD.bAug05
Length: 1972
Transcript: PIK3CD.bAug05
Reaction
Expected peak: 172
Associated peak: 183,184,185,186,187
Repeated 51 time
Molarity: 6.60M
Forward: PIK3CD.F1
Reverse: PIK3CD.R1
Expected peak: 172
Associated peak: 183,184,185,186,187
Repeated 51 time
Molarity: 6.60M
Forward: PIK3CD.F1
Reverse: PIK3CD.R1
Exon
Length: 27
Transcript: PIK3CD.cAug05
Length: 27
Transcript: PIK3CD.cAug05
Exon
Length: 105
Transcript: PIK3CD.cAug05
Length: 105
Transcript: PIK3CD.cAug05
Exon
Length: 173
Transcript: PIK3CD.cAug05
Length: 173
Transcript: PIK3CD.cAug05
Exon
Length: 229
Transcript: PIK3CD.cAug05
Length: 229
Transcript: PIK3CD.cAug05
Exon
Length: 771
Transcript: PIK3CD.cAug05
Length: 771
Transcript: PIK3CD.cAug05
Exon
Length: 150
Transcript: PIK3CD.cAug05
Length: 150
Transcript: PIK3CD.cAug05
Exon
Length: 45
Transcript: PIK3CD.cAug05
Length: 45
Transcript: PIK3CD.cAug05
Intron
Length: 1745
Transcript: PIK3CD.cAug05
Length: 1745
Transcript: PIK3CD.cAug05
Intron
Length: 18852
Transcript: PIK3CD.cAug05
Length: 18852
Transcript: PIK3CD.cAug05
Intron
Length: 4944
Transcript: PIK3CD.cAug05
Length: 4944
Transcript: PIK3CD.cAug05
Intron
Length: 79
Transcript: PIK3CD.cAug05
Length: 79
Transcript: PIK3CD.cAug05
Intron
Length: 339
Transcript: PIK3CD.cAug05
Length: 339
Transcript: PIK3CD.cAug05
Intron
Length: 428
Transcript: PIK3CD.cAug05
Length: 428
Transcript: PIK3CD.cAug05
Exon
Length: 71
Transcript: PIK3CD.dAug05
Length: 71
Transcript: PIK3CD.dAug05
Exon
Length: 163
Transcript: PIK3CD.dAug05
Length: 163
Transcript: PIK3CD.dAug05
Exon
Length: 105
Transcript: PIK3CD.dAug05
Length: 105
Transcript: PIK3CD.dAug05
Exon
Length: 27
Transcript: PIK3CD.dAug05
Length: 27
Transcript: PIK3CD.dAug05
Intron
Length: 12793
Transcript: PIK3CD.dAug05
Length: 12793
Transcript: PIK3CD.dAug05
Intron
Length: 26708
Transcript: PIK3CD.dAug05
Length: 26708
Transcript: PIK3CD.dAug05
Intron
Length: 18852
Transcript: PIK3CD.dAug05
Length: 18852
Transcript: PIK3CD.dAug05
Exon
Length: 43
Transcript: PIK3CD.eAug05
Length: 43
Transcript: PIK3CD.eAug05
Exon
Length: 176
Transcript: PIK3CD.eAug05
Length: 176
Transcript: PIK3CD.eAug05
Exon
Length: 173
Transcript: PIK3CD.eAug05
Length: 173
Transcript: PIK3CD.eAug05
Exon
Length: 213
Transcript: PIK3CD.eAug05
Length: 213
Transcript: PIK3CD.eAug05
Exon
Length: 992
Transcript: PIK3CD.eAug05
Length: 992
Transcript: PIK3CD.eAug05
Intron
Length: 58302
Transcript: PIK3CD.eAug05
Length: 58302
Transcript: PIK3CD.eAug05
Intron
Length: 143
Transcript: PIK3CD.eAug05
Length: 143
Transcript: PIK3CD.eAug05
Intron
Length: 4944
Transcript: PIK3CD.eAug05
Length: 4944
Transcript: PIK3CD.eAug05
Intron
Length: 12171
Transcript: PIK3CD.eAug05
Length: 12171
Transcript: PIK3CD.eAug05
Reaction
Expected peak: 243
Associated peak: 242,259,260,261,262
Repeated 51 time
Molarity: 1.25M
Forward: PIK3CD.F1
Reverse: PIK3CD.R1
Expected peak: 243
Associated peak: 242,259,260,261,262
Repeated 51 time
Molarity: 1.25M
Forward: PIK3CD.F1
Reverse: PIK3CD.R1
Exon
Length: 43
Transcript: PIK3CD.fAug05
Length: 43
Transcript: PIK3CD.fAug05
Exon
Length: 176
Transcript: PIK3CD.fAug05
Length: 176
Transcript: PIK3CD.fAug05
Exon
Length: 173
Transcript: PIK3CD.fAug05
Length: 173
Transcript: PIK3CD.fAug05
Exon
Length: 213
Transcript: PIK3CD.fAug05
Length: 213
Transcript: PIK3CD.fAug05
Exon
Length: 138
Transcript: PIK3CD.fAug05
Length: 138
Transcript: PIK3CD.fAug05
Intron
Length: 58302
Transcript: PIK3CD.fAug05
Length: 58302
Transcript: PIK3CD.fAug05
Intron
Length: 143
Transcript: PIK3CD.fAug05
Length: 143
Transcript: PIK3CD.fAug05
Intron
Length: 4944
Transcript: PIK3CD.fAug05
Length: 4944
Transcript: PIK3CD.fAug05
Intron
Length: 12171
Transcript: PIK3CD.fAug05
Length: 12171
Transcript: PIK3CD.fAug05
Reaction
Expected peak: 243
Associated peak: 242,259,260,261,262
Repeated 51 time
Molarity: 1.25M
Forward: PIK3CD.F1
Reverse: PIK3CD.R1
Expected peak: 243
Associated peak: 242,259,260,261,262
Repeated 51 time
Molarity: 1.25M
Forward: PIK3CD.F1
Reverse: PIK3CD.R1
Exon
Length: 148
Transcript: PIK3CD.gAug05
Length: 148
Transcript: PIK3CD.gAug05
Exon
Length: 103
Transcript: PIK3CD.gAug05
Length: 103
Transcript: PIK3CD.gAug05
Exon
Length: 269
Transcript: PIK3CD.gAug05
Length: 269
Transcript: PIK3CD.gAug05
Intron
Length: 3150
Transcript: PIK3CD.gAug05
Length: 3150
Transcript: PIK3CD.gAug05
Intron
Length: 103
Transcript: PIK3CD.gAug05
Length: 103
Transcript: PIK3CD.gAug05
Exon
Length: 252
Transcript: PIK3CD.iAug05
Length: 252
Transcript: PIK3CD.iAug05
Exon
Length: 105
Transcript: PIK3CD.iAug05
Length: 105
Transcript: PIK3CD.iAug05
Exon
Length: 173
Transcript: PIK3CD.iAug05
Length: 173
Transcript: PIK3CD.iAug05
Exon
Length: 14
Transcript: PIK3CD.iAug05
Length: 14
Transcript: PIK3CD.iAug05
Intron
Length: 61242
Transcript: PIK3CD.iAug05
Length: 61242
Transcript: PIK3CD.iAug05
Intron
Length: 18852
Transcript: PIK3CD.iAug05
Length: 18852
Transcript: PIK3CD.iAug05
Intron
Length: 4944
Transcript: PIK3CD.iAug05
Length: 4944
Transcript: PIK3CD.iAug05
PIK3CD.F1
GAGCAGAGCCGCCCAGCC
GAGCAGAGCCGCCCAGCC
PIK3CD.R1
GCGTTGTTACTTCCCAGATGAC
GCGTTGTTACTTCCCAGATGAC