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LGFUS Public Data
Identification of alternative splicing markers for breast cancer
2. Breast Validation Screen
Transcript map
: CASP10
Exon
Length: 177
Transcript: CASP10.aAug05
Length: 177
Transcript: CASP10.aAug05
Exon
Length: 354
Transcript: CASP10.aAug05
Length: 354
Transcript: CASP10.aAug05
Exon
Length: 94
Transcript: CASP10.aAug05
Length: 94
Transcript: CASP10.aAug05
Exon
Length: 136
Transcript: CASP10.aAug05
Length: 136
Transcript: CASP10.aAug05
Exon
Length: 107
Transcript: CASP10.aAug05
Length: 107
Transcript: CASP10.aAug05
Exon
Length: 37
Transcript: CASP10.aAug05
Length: 37
Transcript: CASP10.aAug05
Exon
Length: 92
Transcript: CASP10.aAug05
Length: 92
Transcript: CASP10.aAug05
Exon
Length: 109
Transcript: CASP10.aAug05
Length: 109
Transcript: CASP10.aAug05
Exon
Length: 493
Transcript: CASP10.aAug05
Length: 493
Transcript: CASP10.aAug05
Exon
Length: 421
Transcript: CASP10.aAug05
Length: 421
Transcript: CASP10.aAug05
Exon
Length: 1747
Transcript: CASP10.aAug05
Length: 1747
Transcript: CASP10.aAug05
Intron
Length: 2462
Transcript: CASP10.aAug05
Length: 2462
Transcript: CASP10.aAug05
Intron
Length: 1581
Transcript: CASP10.aAug05
Length: 1581
Transcript: CASP10.aAug05
Intron
Length: 5184
Transcript: CASP10.aAug05
Length: 5184
Transcript: CASP10.aAug05
Intron
Length: 2722
Transcript: CASP10.aAug05
Length: 2722
Transcript: CASP10.aAug05
Intron
Length: 7781
Transcript: CASP10.aAug05
Length: 7781
Transcript: CASP10.aAug05
Intron
Length: 2115
Transcript: CASP10.aAug05
Length: 2115
Transcript: CASP10.aAug05
Intron
Length: 2101
Transcript: CASP10.aAug05
Length: 2101
Transcript: CASP10.aAug05
Intron
Length: 886
Transcript: CASP10.aAug05
Length: 886
Transcript: CASP10.aAug05
Intron
Length: 8025
Transcript: CASP10.aAug05
Length: 8025
Transcript: CASP10.aAug05
Intron
Length: 389
Transcript: CASP10.aAug05
Length: 389
Transcript: CASP10.aAug05
Reaction
Expected peak: 241
Associated peak: 254,255,256,257,258,259
Repeated 51 time
Molarity: 12.79M
Forward: CASP10.b.f.23
Reverse: CASP10.u.r.15
Expected peak: 241
Associated peak: 254,255,256,257,258,259
Repeated 51 time
Molarity: 12.79M
Forward: CASP10.b.f.23
Reverse: CASP10.u.r.15
Exon
Length: 147
Transcript: CASP10.bAug05
Length: 147
Transcript: CASP10.bAug05
Exon
Length: 354
Transcript: CASP10.bAug05
Length: 354
Transcript: CASP10.bAug05
Exon
Length: 94
Transcript: CASP10.bAug05
Length: 94
Transcript: CASP10.bAug05
Exon
Length: 136
Transcript: CASP10.bAug05
Length: 136
Transcript: CASP10.bAug05
Exon
Length: 107
Transcript: CASP10.bAug05
Length: 107
Transcript: CASP10.bAug05
Exon
Length: 37
Transcript: CASP10.bAug05
Length: 37
Transcript: CASP10.bAug05
Exon
Length: 92
Transcript: CASP10.bAug05
Length: 92
Transcript: CASP10.bAug05
Exon
Length: 109
Transcript: CASP10.bAug05
Length: 109
Transcript: CASP10.bAug05
Exon
Length: 493
Transcript: CASP10.bAug05
Length: 493
Transcript: CASP10.bAug05
Exon
Length: 2641
Transcript: CASP10.bAug05
Length: 2641
Transcript: CASP10.bAug05
Intron
Length: 2462
Transcript: CASP10.bAug05
Length: 2462
Transcript: CASP10.bAug05
Intron
Length: 1581
Transcript: CASP10.bAug05
Length: 1581
Transcript: CASP10.bAug05
Intron
Length: 5184
Transcript: CASP10.bAug05
Length: 5184
Transcript: CASP10.bAug05
Intron
Length: 2722
Transcript: CASP10.bAug05
Length: 2722
Transcript: CASP10.bAug05
Intron
Length: 7781
Transcript: CASP10.bAug05
Length: 7781
Transcript: CASP10.bAug05
Intron
Length: 2115
Transcript: CASP10.bAug05
Length: 2115
Transcript: CASP10.bAug05
Intron
Length: 2101
Transcript: CASP10.bAug05
Length: 2101
Transcript: CASP10.bAug05
Intron
Length: 886
Transcript: CASP10.bAug05
Length: 886
Transcript: CASP10.bAug05
Intron
Length: 8025
Transcript: CASP10.bAug05
Length: 8025
Transcript: CASP10.bAug05
Reaction
Expected peak: 241
Associated peak: 254,255,256,257,258,259
Repeated 51 time
Molarity: 12.79M
Forward: CASP10.b.f.23
Reverse: CASP10.u.r.15
Expected peak: 241
Associated peak: 254,255,256,257,258,259
Repeated 51 time
Molarity: 12.79M
Forward: CASP10.b.f.23
Reverse: CASP10.u.r.15
Exon
Length: 177
Transcript: CASP10.cAug05
Length: 177
Transcript: CASP10.cAug05
Exon
Length: 354
Transcript: CASP10.cAug05
Length: 354
Transcript: CASP10.cAug05
Exon
Length: 94
Transcript: CASP10.cAug05
Length: 94
Transcript: CASP10.cAug05
Exon
Length: 136
Transcript: CASP10.cAug05
Length: 136
Transcript: CASP10.cAug05
Exon
Length: 107
Transcript: CASP10.cAug05
Length: 107
Transcript: CASP10.cAug05
Exon
Length: 37
Transcript: CASP10.cAug05
Length: 37
Transcript: CASP10.cAug05
Exon
Length: 92
Transcript: CASP10.cAug05
Length: 92
Transcript: CASP10.cAug05
Exon
Length: 109
Transcript: CASP10.cAug05
Length: 109
Transcript: CASP10.cAug05
Exon
Length: 493
Transcript: CASP10.cAug05
Length: 493
Transcript: CASP10.cAug05
Exon
Length: 474
Transcript: CASP10.cAug05
Length: 474
Transcript: CASP10.cAug05
Intron
Length: 2462
Transcript: CASP10.cAug05
Length: 2462
Transcript: CASP10.cAug05
Intron
Length: 1581
Transcript: CASP10.cAug05
Length: 1581
Transcript: CASP10.cAug05
Intron
Length: 5184
Transcript: CASP10.cAug05
Length: 5184
Transcript: CASP10.cAug05
Intron
Length: 2722
Transcript: CASP10.cAug05
Length: 2722
Transcript: CASP10.cAug05
Intron
Length: 7781
Transcript: CASP10.cAug05
Length: 7781
Transcript: CASP10.cAug05
Intron
Length: 2115
Transcript: CASP10.cAug05
Length: 2115
Transcript: CASP10.cAug05
Intron
Length: 2101
Transcript: CASP10.cAug05
Length: 2101
Transcript: CASP10.cAug05
Intron
Length: 886
Transcript: CASP10.cAug05
Length: 886
Transcript: CASP10.cAug05
Intron
Length: 19370
Transcript: CASP10.cAug05
Length: 19370
Transcript: CASP10.cAug05
Reaction
Expected peak: 241
Associated peak: 254,255,256,257,258,259
Repeated 51 time
Molarity: 12.79M
Forward: CASP10.b.f.23
Reverse: CASP10.u.r.15
Expected peak: 241
Associated peak: 254,255,256,257,258,259
Repeated 51 time
Molarity: 12.79M
Forward: CASP10.b.f.23
Reverse: CASP10.u.r.15
Exon
Length: 177
Transcript: CASP10.dAug05
Length: 177
Transcript: CASP10.dAug05
Exon
Length: 354
Transcript: CASP10.dAug05
Length: 354
Transcript: CASP10.dAug05
Exon
Length: 94
Transcript: CASP10.dAug05
Length: 94
Transcript: CASP10.dAug05
Exon
Length: 136
Transcript: CASP10.dAug05
Length: 136
Transcript: CASP10.dAug05
Exon
Length: 107
Transcript: CASP10.dAug05
Length: 107
Transcript: CASP10.dAug05
Exon
Length: 109
Transcript: CASP10.dAug05
Length: 109
Transcript: CASP10.dAug05
Exon
Length: 493
Transcript: CASP10.dAug05
Length: 493
Transcript: CASP10.dAug05
Exon
Length: 421
Transcript: CASP10.dAug05
Length: 421
Transcript: CASP10.dAug05
Exon
Length: 1747
Transcript: CASP10.dAug05
Length: 1747
Transcript: CASP10.dAug05
Intron
Length: 2462
Transcript: CASP10.dAug05
Length: 2462
Transcript: CASP10.dAug05
Intron
Length: 1581
Transcript: CASP10.dAug05
Length: 1581
Transcript: CASP10.dAug05
Intron
Length: 5184
Transcript: CASP10.dAug05
Length: 5184
Transcript: CASP10.dAug05
Intron
Length: 2722
Transcript: CASP10.dAug05
Length: 2722
Transcript: CASP10.dAug05
Intron
Length: 12126
Transcript: CASP10.dAug05
Length: 12126
Transcript: CASP10.dAug05
Intron
Length: 886
Transcript: CASP10.dAug05
Length: 886
Transcript: CASP10.dAug05
Intron
Length: 8025
Transcript: CASP10.dAug05
Length: 8025
Transcript: CASP10.dAug05
Intron
Length: 389
Transcript: CASP10.dAug05
Length: 389
Transcript: CASP10.dAug05
Reaction
Expected peak: 112
Associated peak: 119,120,121,122,123
Repeated 51 time
Molarity: 4.10M
Forward: CASP10.b.f.23
Reverse: CASP10.u.r.15
Expected peak: 112
Associated peak: 119,120,121,122,123
Repeated 51 time
Molarity: 4.10M
Forward: CASP10.b.f.23
Reverse: CASP10.u.r.15
Exon
Length: 114
Transcript: CASP10.eAug05
Length: 114
Transcript: CASP10.eAug05
Exon
Length: 354
Transcript: CASP10.eAug05
Length: 354
Transcript: CASP10.eAug05
Exon
Length: 94
Transcript: CASP10.eAug05
Length: 94
Transcript: CASP10.eAug05
Exon
Length: 136
Transcript: CASP10.eAug05
Length: 136
Transcript: CASP10.eAug05
Exon
Length: 107
Transcript: CASP10.eAug05
Length: 107
Transcript: CASP10.eAug05
Exon
Length: 109
Transcript: CASP10.eAug05
Length: 109
Transcript: CASP10.eAug05
Exon
Length: 493
Transcript: CASP10.eAug05
Length: 493
Transcript: CASP10.eAug05
Exon
Length: 312
Transcript: CASP10.eAug05
Length: 312
Transcript: CASP10.eAug05
Intron
Length: 2462
Transcript: CASP10.eAug05
Length: 2462
Transcript: CASP10.eAug05
Intron
Length: 1581
Transcript: CASP10.eAug05
Length: 1581
Transcript: CASP10.eAug05
Intron
Length: 5184
Transcript: CASP10.eAug05
Length: 5184
Transcript: CASP10.eAug05
Intron
Length: 2722
Transcript: CASP10.eAug05
Length: 2722
Transcript: CASP10.eAug05
Intron
Length: 12126
Transcript: CASP10.eAug05
Length: 12126
Transcript: CASP10.eAug05
Intron
Length: 886
Transcript: CASP10.eAug05
Length: 886
Transcript: CASP10.eAug05
Intron
Length: 19370
Transcript: CASP10.eAug05
Length: 19370
Transcript: CASP10.eAug05
Reaction
Expected peak: 112
Associated peak: 119,120,121,122,123
Repeated 51 time
Molarity: 4.10M
Forward: CASP10.b.f.23
Reverse: CASP10.u.r.15
Expected peak: 112
Associated peak: 119,120,121,122,123
Repeated 51 time
Molarity: 4.10M
Forward: CASP10.b.f.23
Reverse: CASP10.u.r.15
Exon
Length: 411
Transcript: CASP10.fAug05
Length: 411
Transcript: CASP10.fAug05
Exon
Length: 354
Transcript: CASP10.fAug05
Length: 354
Transcript: CASP10.fAug05
Exon
Length: 94
Transcript: CASP10.fAug05
Length: 94
Transcript: CASP10.fAug05
Exon
Length: 136
Transcript: CASP10.fAug05
Length: 136
Transcript: CASP10.fAug05
Exon
Length: 107
Transcript: CASP10.fAug05
Length: 107
Transcript: CASP10.fAug05
Exon
Length: 37
Transcript: CASP10.fAug05
Length: 37
Transcript: CASP10.fAug05
Exon
Length: 493
Transcript: CASP10.fAug05
Length: 493
Transcript: CASP10.fAug05
Exon
Length: 183
Transcript: CASP10.fAug05
Length: 183
Transcript: CASP10.fAug05
Intron
Length: 2462
Transcript: CASP10.fAug05
Length: 2462
Transcript: CASP10.fAug05
Intron
Length: 1581
Transcript: CASP10.fAug05
Length: 1581
Transcript: CASP10.fAug05
Intron
Length: 5184
Transcript: CASP10.fAug05
Length: 5184
Transcript: CASP10.fAug05
Intron
Length: 2722
Transcript: CASP10.fAug05
Length: 2722
Transcript: CASP10.fAug05
Intron
Length: 7781
Transcript: CASP10.fAug05
Length: 7781
Transcript: CASP10.fAug05
Intron
Length: 5303
Transcript: CASP10.fAug05
Length: 5303
Transcript: CASP10.fAug05
Intron
Length: 8025
Transcript: CASP10.fAug05
Length: 8025
Transcript: CASP10.fAug05
Exon
Length: 177
Transcript: CASP10.gAug05
Length: 177
Transcript: CASP10.gAug05
Exon
Length: 354
Transcript: CASP10.gAug05
Length: 354
Transcript: CASP10.gAug05
Exon
Length: 94
Transcript: CASP10.gAug05
Length: 94
Transcript: CASP10.gAug05
Exon
Length: 136
Transcript: CASP10.gAug05
Length: 136
Transcript: CASP10.gAug05
Exon
Length: 107
Transcript: CASP10.gAug05
Length: 107
Transcript: CASP10.gAug05
Exon
Length: 37
Transcript: CASP10.gAug05
Length: 37
Transcript: CASP10.gAug05
Exon
Length: 109
Transcript: CASP10.gAug05
Length: 109
Transcript: CASP10.gAug05
Exon
Length: 493
Transcript: CASP10.gAug05
Length: 493
Transcript: CASP10.gAug05
Exon
Length: 421
Transcript: CASP10.gAug05
Length: 421
Transcript: CASP10.gAug05
Exon
Length: 1747
Transcript: CASP10.gAug05
Length: 1747
Transcript: CASP10.gAug05
Intron
Length: 2462
Transcript: CASP10.gAug05
Length: 2462
Transcript: CASP10.gAug05
Intron
Length: 1581
Transcript: CASP10.gAug05
Length: 1581
Transcript: CASP10.gAug05
Intron
Length: 5184
Transcript: CASP10.gAug05
Length: 5184
Transcript: CASP10.gAug05
Intron
Length: 2722
Transcript: CASP10.gAug05
Length: 2722
Transcript: CASP10.gAug05
Intron
Length: 7781
Transcript: CASP10.gAug05
Length: 7781
Transcript: CASP10.gAug05
Intron
Length: 4308
Transcript: CASP10.gAug05
Length: 4308
Transcript: CASP10.gAug05
Intron
Length: 886
Transcript: CASP10.gAug05
Length: 886
Transcript: CASP10.gAug05
Intron
Length: 8025
Transcript: CASP10.gAug05
Length: 8025
Transcript: CASP10.gAug05
Intron
Length: 389
Transcript: CASP10.gAug05
Length: 389
Transcript: CASP10.gAug05
Reaction
Expected peak: 149
Associated peak: 161,162,163,165
Repeated 51 time
Molarity: 0.75M
Forward: CASP10.b.f.23
Reverse: CASP10.u.r.15
Expected peak: 149
Associated peak: 161,162,163,165
Repeated 51 time
Molarity: 0.75M
Forward: CASP10.b.f.23
Reverse: CASP10.u.r.15
Exon
Length: 347
Transcript: CASP10.hAug05
Length: 347
Transcript: CASP10.hAug05
Exon
Length: 94
Transcript: CASP10.hAug05
Length: 94
Transcript: CASP10.hAug05
Exon
Length: 136
Transcript: CASP10.hAug05
Length: 136
Transcript: CASP10.hAug05
Exon
Length: 179
Transcript: CASP10.hAug05
Length: 179
Transcript: CASP10.hAug05
Intron
Length: 1581
Transcript: CASP10.hAug05
Length: 1581
Transcript: CASP10.hAug05
Intron
Length: 5184
Transcript: CASP10.hAug05
Length: 5184
Transcript: CASP10.hAug05
Intron
Length: 2722
Transcript: CASP10.hAug05
Length: 2722
Transcript: CASP10.hAug05
Exon
Length: 149
Transcript: CASP10.iAug05
Length: 149
Transcript: CASP10.iAug05
Exon
Length: 354
Transcript: CASP10.iAug05
Length: 354
Transcript: CASP10.iAug05
Exon
Length: 94
Transcript: CASP10.iAug05
Length: 94
Transcript: CASP10.iAug05
Exon
Length: 136
Transcript: CASP10.iAug05
Length: 136
Transcript: CASP10.iAug05
Exon
Length: 107
Transcript: CASP10.iAug05
Length: 107
Transcript: CASP10.iAug05
Exon
Length: 287
Transcript: CASP10.iAug05
Length: 287
Transcript: CASP10.iAug05
Intron
Length: 2462
Transcript: CASP10.iAug05
Length: 2462
Transcript: CASP10.iAug05
Intron
Length: 1581
Transcript: CASP10.iAug05
Length: 1581
Transcript: CASP10.iAug05
Intron
Length: 5184
Transcript: CASP10.iAug05
Length: 5184
Transcript: CASP10.iAug05
Intron
Length: 2722
Transcript: CASP10.iAug05
Length: 2722
Transcript: CASP10.iAug05
Intron
Length: 4494
Transcript: CASP10.iAug05
Length: 4494
Transcript: CASP10.iAug05
Exon
Length: 168
Transcript: CASP10.jAug05
Length: 168
Transcript: CASP10.jAug05
Exon
Length: 354
Transcript: CASP10.jAug05
Length: 354
Transcript: CASP10.jAug05
Exon
Length: 233
Transcript: CASP10.jAug05
Length: 233
Transcript: CASP10.jAug05
Intron
Length: 2462
Transcript: CASP10.jAug05
Length: 2462
Transcript: CASP10.jAug05
Intron
Length: 1581
Transcript: CASP10.jAug05
Length: 1581
Transcript: CASP10.jAug05
Exon
Length: 46
Transcript: CASP10.kAug05
Length: 46
Transcript: CASP10.kAug05
Exon
Length: 107
Transcript: CASP10.kAug05
Length: 107
Transcript: CASP10.kAug05
Exon
Length: 34
Transcript: CASP10.kAug05
Length: 34
Transcript: CASP10.kAug05
Exon
Length: 92
Transcript: CASP10.kAug05
Length: 92
Transcript: CASP10.kAug05
Exon
Length: 15
Transcript: CASP10.kAug05
Length: 15
Transcript: CASP10.kAug05
Intron
Length: 2722
Transcript: CASP10.kAug05
Length: 2722
Transcript: CASP10.kAug05
Intron
Length: 7784
Transcript: CASP10.kAug05
Length: 7784
Transcript: CASP10.kAug05
Intron
Length: 2115
Transcript: CASP10.kAug05
Length: 2115
Transcript: CASP10.kAug05
Intron
Length: 2101
Transcript: CASP10.kAug05
Length: 2101
Transcript: CASP10.kAug05
Exon
Length: 54
Transcript: CASP10.lAug05
Length: 54
Transcript: CASP10.lAug05
Exon
Length: 380
Transcript: CASP10.lAug05
Length: 380
Transcript: CASP10.lAug05
Intron
Length: 5184
Transcript: CASP10.lAug05
Length: 5184
Transcript: CASP10.lAug05
Exon
Length: 319
Transcript: CASP10.shed1.aAug05
Length: 319
Transcript: CASP10.shed1.aAug05
Exon
Length: 455
Transcript: CASP10.shed2.aAug05
Length: 455
Transcript: CASP10.shed2.aAug05
CASP10.b.f.23
AAGCCGAGTCGTATCAAGGA
AAGCCGAGTCGTATCAAGGA
CASP10.u.r.15
CCTCTGTGGTTCCGATTCAT
CCTCTGTGGTTCCGATTCAT