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Home Public data LGFUS Public Data Identification of alternative splicing markers for breast cancer 2. Breast Validation Screen permalink
2. Breast Validation Screen ⚙
Transcript map : IL1RN
Exon
Length: 180
Transcript: IL1RN.aAug05
Exon
Length: 89
Transcript: IL1RN.aAug05
Exon
Length: 113
Transcript: IL1RN.aAug05
Exon
Length: 1360
Transcript: IL1RN.aAug05
Intron
Length: 1835
Transcript: IL1RN.aAug05
Intron
Length: 1380
Transcript: IL1RN.aAug05
Intron
Length: 1498
Transcript: IL1RN.aAug05
Exon
Length: 136
Transcript: IL1RN.bAug05
Exon
Length: 63
Transcript: IL1RN.bAug05
Exon
Length: 52
Transcript: IL1RN.bAug05
Exon
Length: 89
Transcript: IL1RN.bAug05
Exon
Length: 113
Transcript: IL1RN.bAug05
Exon
Length: 1360
Transcript: IL1RN.bAug05
Intron
Length: 2037
Transcript: IL1RN.bAug05
Intron
Length: 7560
Transcript: IL1RN.bAug05
Intron
Length: 1835
Transcript: IL1RN.bAug05
Intron
Length: 1380
Transcript: IL1RN.bAug05
Intron
Length: 1498
Transcript: IL1RN.bAug05
Exon
Length: 164
Transcript: IL1RN.cAug05
Exon
Length: 52
Transcript: IL1RN.cAug05
Exon
Length: 89
Transcript: IL1RN.cAug05
Exon
Length: 113
Transcript: IL1RN.cAug05
Exon
Length: 1363
Transcript: IL1RN.cAug05
Intron
Length: 9660
Transcript: IL1RN.cAug05
Intron
Length: 1835
Transcript: IL1RN.cAug05
Intron
Length: 1380
Transcript: IL1RN.cAug05
Intron
Length: 1498
Transcript: IL1RN.cAug05
Exon
Length: 230
Transcript: IL1RN.dAug05
Exon
Length: 84
Transcript: IL1RN.dAug05
Exon
Length: 115
Transcript: IL1RN.dAug05
Exon
Length: 63
Transcript: IL1RN.dAug05
Exon
Length: 171
Transcript: IL1RN.dAug05
Exon
Length: 52
Transcript: IL1RN.dAug05
Exon
Length: 89
Transcript: IL1RN.dAug05
Exon
Length: 113
Transcript: IL1RN.dAug05
Exon
Length: 805
Transcript: IL1RN.dAug05
Exon
Length: 411
Transcript: IL1RN.dAug05
Intron
Length: 11526
Transcript: IL1RN.dAug05
Intron
Length: 1800
Transcript: IL1RN.dAug05
Intron
Length: 6951
Transcript: IL1RN.dAug05
Intron
Length: 1319
Transcript: IL1RN.dAug05
Intron
Length: 6070
Transcript: IL1RN.dAug05
Intron
Length: 1835
Transcript: IL1RN.dAug05
Intron
Length: 1380
Transcript: IL1RN.dAug05
Intron
Length: 1498
Transcript: IL1RN.dAug05
Intron
Length: 142
Transcript: IL1RN.dAug05
Exon
Length: 136
Transcript: IL1RN.eAug05
Exon
Length: 171
Transcript: IL1RN.eAug05
Exon
Length: 52
Transcript: IL1RN.eAug05
Exon
Length: 89
Transcript: IL1RN.eAug05
Exon
Length: 113
Transcript: IL1RN.eAug05
Exon
Length: 1360
Transcript: IL1RN.eAug05
Intron
Length: 3419
Transcript: IL1RN.eAug05
Intron
Length: 6070
Transcript: IL1RN.eAug05
Intron
Length: 1835
Transcript: IL1RN.eAug05
Intron
Length: 1380
Transcript: IL1RN.eAug05
Intron
Length: 1498
Transcript: IL1RN.eAug05
Reaction
Expected peak: 127
Associated peak: 134,135,136,137
Repeated 51 time
Molarity: 7.51M
Forward: IL1RN.F5
Reverse: IL1RN.R9
Reaction
Expected peak: 178
Associated peak: 191,192,193,194,195
Repeated 51 time
Molarity: 10.06M
Forward: IL1RN.F6
Reverse: IL1RN.R10
Exon
Length: 88
Transcript: IL1RN.fAug05
Exon
Length: 63
Transcript: IL1RN.fAug05
Exon
Length: 171
Transcript: IL1RN.fAug05
Exon
Length: 52
Transcript: IL1RN.fAug05
Exon
Length: 89
Transcript: IL1RN.fAug05
Exon
Length: 113
Transcript: IL1RN.fAug05
Exon
Length: 224
Transcript: IL1RN.fAug05
Intron
Length: 2037
Transcript: IL1RN.fAug05
Intron
Length: 1319
Transcript: IL1RN.fAug05
Intron
Length: 6070
Transcript: IL1RN.fAug05
Intron
Length: 1835
Transcript: IL1RN.fAug05
Intron
Length: 1380
Transcript: IL1RN.fAug05
Intron
Length: 1498
Transcript: IL1RN.fAug05
Reaction
Expected peak: 190
Associated peak: 201,202,203,204,205
Repeated 51 time
Molarity: 1.87M
Forward: IL1RN.F5
Reverse: IL1RN.R9
Reaction
Expected peak: 241
Associated peak: 251,252,253,254,255
Repeated 51 time
Molarity: 2.54M
Forward: IL1RN.F6
Reverse: IL1RN.R10
Exon
Length: 152
Transcript: IL1RN.gAug05
Exon
Length: 1012
Transcript: IL1RN.gAug05
Exon
Length: 398
Transcript: IL1RN.gAug05
Exon
Length: 282
Transcript: IL1RN.gAug05
Intron
Length: 1835
Transcript: IL1RN.gAug05
Intron
Length: 172
Transcript: IL1RN.gAug05
Intron
Length: 1498
Transcript: IL1RN.gAug05
Exon
Length: 128
Transcript: IL1RN.hAug05
Exon
Length: 89
Transcript: IL1RN.hAug05
Exon
Length: 108
Transcript: IL1RN.hAug05
Exon
Length: 1363
Transcript: IL1RN.hAug05
Intron
Length: 1835
Transcript: IL1RN.hAug05
Intron
Length: 1385
Transcript: IL1RN.hAug05
Intron
Length: 1498
Transcript: IL1RN.hAug05
Exon
Length: 111
Transcript: IL1RN.iAug05
Exon
Length: 84
Transcript: IL1RN.iAug05
Exon
Length: 219
Transcript: IL1RN.iAug05
Intron
Length: 11526
Transcript: IL1RN.iAug05
Intron
Length: 1800
Transcript: IL1RN.iAug05
Exon
Length: 275
Transcript: IL1RN.jAug05
Exon
Length: 172
Transcript: IL1RN.jAug05
Exon
Length: 84
Transcript: IL1RN.jAug05
Exon
Length: 115
Transcript: IL1RN.jAug05
Exon
Length: 129
Transcript: IL1RN.jAug05
Exon
Length: 15
Transcript: IL1RN.jAug05
Intron
Length: 7624
Transcript: IL1RN.jAug05
Intron
Length: 3730
Transcript: IL1RN.jAug05
Intron
Length: 1800
Transcript: IL1RN.jAug05
Intron
Length: 4422
Transcript: IL1RN.jAug05
Intron
Length: 2400
Transcript: IL1RN.jAug05
Exon
Length: 314
Transcript: IL1RN.shed1.aAug05
IL1RN.R9
GCCTTCTTGGCTTTGATGATT
IL1RN.F6
TGGAAGACCTCAGAAGACCTCC
IL1RN.R10
CCCAGCAGTTTATGGGTTAGC
IL1RN.F5
GTGCTACTTTATGGGCAGCAG
Gene primer pair list : Primer pairs
Forward Reverse Occurences View
IL1RN.F5 IL1RN.R9 51 View
IL1RN.F6 IL1RN.R10 51 View

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