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Identification of alternative splicing markers for breast cancer
2. Breast Validation Screen
Transcript map
: ECT2
Exon
Length: 150
Transcript: ECT2.aAug05
Length: 150
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Exon
Length: 152
Transcript: ECT2.aAug05
Length: 152
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Exon
Length: 80
Transcript: ECT2.aAug05
Length: 80
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Exon
Length: 183
Transcript: ECT2.aAug05
Length: 183
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Exon
Length: 90
Transcript: ECT2.aAug05
Length: 90
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Exon
Length: 108
Transcript: ECT2.aAug05
Length: 108
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Exon
Length: 74
Transcript: ECT2.aAug05
Length: 74
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Exon
Length: 131
Transcript: ECT2.aAug05
Length: 131
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Exon
Length: 116
Transcript: ECT2.aAug05
Length: 116
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Exon
Length: 63
Transcript: ECT2.aAug05
Length: 63
Transcript: ECT2.aAug05
Exon
Length: 223
Transcript: ECT2.aAug05
Length: 223
Transcript: ECT2.aAug05
Exon
Length: 137
Transcript: ECT2.aAug05
Length: 137
Transcript: ECT2.aAug05
Exon
Length: 120
Transcript: ECT2.aAug05
Length: 120
Transcript: ECT2.aAug05
Exon
Length: 69
Transcript: ECT2.aAug05
Length: 69
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Exon
Length: 111
Transcript: ECT2.aAug05
Length: 111
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Exon
Length: 97
Transcript: ECT2.aAug05
Length: 97
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Exon
Length: 82
Transcript: ECT2.aAug05
Length: 82
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Exon
Length: 79
Transcript: ECT2.aAug05
Length: 79
Transcript: ECT2.aAug05
Exon
Length: 120
Transcript: ECT2.aAug05
Length: 120
Transcript: ECT2.aAug05
Exon
Length: 139
Transcript: ECT2.aAug05
Length: 139
Transcript: ECT2.aAug05
Exon
Length: 155
Transcript: ECT2.aAug05
Length: 155
Transcript: ECT2.aAug05
Exon
Length: 108
Transcript: ECT2.aAug05
Length: 108
Transcript: ECT2.aAug05
Exon
Length: 147
Transcript: ECT2.aAug05
Length: 147
Transcript: ECT2.aAug05
Exon
Length: 1326
Transcript: ECT2.aAug05
Length: 1326
Transcript: ECT2.aAug05
Intron
Length: 3651
Transcript: ECT2.aAug05
Length: 3651
Transcript: ECT2.aAug05
Intron
Length: 634
Transcript: ECT2.aAug05
Length: 634
Transcript: ECT2.aAug05
Intron
Length: 1608
Transcript: ECT2.aAug05
Length: 1608
Transcript: ECT2.aAug05
Intron
Length: 1814
Transcript: ECT2.aAug05
Length: 1814
Transcript: ECT2.aAug05
Intron
Length: 1086
Transcript: ECT2.aAug05
Length: 1086
Transcript: ECT2.aAug05
Intron
Length: 1346
Transcript: ECT2.aAug05
Length: 1346
Transcript: ECT2.aAug05
Intron
Length: 732
Transcript: ECT2.aAug05
Length: 732
Transcript: ECT2.aAug05
Intron
Length: 144
Transcript: ECT2.aAug05
Length: 144
Transcript: ECT2.aAug05
Intron
Length: 103
Transcript: ECT2.aAug05
Length: 103
Transcript: ECT2.aAug05
Intron
Length: 1305
Transcript: ECT2.aAug05
Length: 1305
Transcript: ECT2.aAug05
Intron
Length: 4506
Transcript: ECT2.aAug05
Length: 4506
Transcript: ECT2.aAug05
Intron
Length: 4759
Transcript: ECT2.aAug05
Length: 4759
Transcript: ECT2.aAug05
Intron
Length: 8140
Transcript: ECT2.aAug05
Length: 8140
Transcript: ECT2.aAug05
Intron
Length: 1567
Transcript: ECT2.aAug05
Length: 1567
Transcript: ECT2.aAug05
Intron
Length: 797
Transcript: ECT2.aAug05
Length: 797
Transcript: ECT2.aAug05
Intron
Length: 1689
Transcript: ECT2.aAug05
Length: 1689
Transcript: ECT2.aAug05
Intron
Length: 16041
Transcript: ECT2.aAug05
Length: 16041
Transcript: ECT2.aAug05
Intron
Length: 166
Transcript: ECT2.aAug05
Length: 166
Transcript: ECT2.aAug05
Intron
Length: 2750
Transcript: ECT2.aAug05
Length: 2750
Transcript: ECT2.aAug05
Intron
Length: 1900
Transcript: ECT2.aAug05
Length: 1900
Transcript: ECT2.aAug05
Intron
Length: 7679
Transcript: ECT2.aAug05
Length: 7679
Transcript: ECT2.aAug05
Intron
Length: 979
Transcript: ECT2.aAug05
Length: 979
Transcript: ECT2.aAug05
Intron
Length: 3310
Transcript: ECT2.aAug05
Length: 3310
Transcript: ECT2.aAug05
Reaction
Expected peak: 100
Associated peak: 103,104,105,106,107,108
Repeated 51 time
Molarity: 35.42M
Forward: ECT2.F12
Reverse: ECT2.R11
Expected peak: 100
Associated peak: 103,104,105,106,107,108
Repeated 51 time
Molarity: 35.42M
Forward: ECT2.F12
Reverse: ECT2.R11
Exon
Length: 100
Transcript: ECT2.bAug05
Length: 100
Transcript: ECT2.bAug05
Exon
Length: 323
Transcript: ECT2.bAug05
Length: 323
Transcript: ECT2.bAug05
Exon
Length: 152
Transcript: ECT2.bAug05
Length: 152
Transcript: ECT2.bAug05
Exon
Length: 77
Transcript: ECT2.bAug05
Length: 77
Transcript: ECT2.bAug05
Exon
Length: 183
Transcript: ECT2.bAug05
Length: 183
Transcript: ECT2.bAug05
Exon
Length: 90
Transcript: ECT2.bAug05
Length: 90
Transcript: ECT2.bAug05
Exon
Length: 108
Transcript: ECT2.bAug05
Length: 108
Transcript: ECT2.bAug05
Exon
Length: 74
Transcript: ECT2.bAug05
Length: 74
Transcript: ECT2.bAug05
Exon
Length: 131
Transcript: ECT2.bAug05
Length: 131
Transcript: ECT2.bAug05
Exon
Length: 116
Transcript: ECT2.bAug05
Length: 116
Transcript: ECT2.bAug05
Exon
Length: 63
Transcript: ECT2.bAug05
Length: 63
Transcript: ECT2.bAug05
Exon
Length: 223
Transcript: ECT2.bAug05
Length: 223
Transcript: ECT2.bAug05
Exon
Length: 137
Transcript: ECT2.bAug05
Length: 137
Transcript: ECT2.bAug05
Exon
Length: 120
Transcript: ECT2.bAug05
Length: 120
Transcript: ECT2.bAug05
Exon
Length: 69
Transcript: ECT2.bAug05
Length: 69
Transcript: ECT2.bAug05
Exon
Length: 111
Transcript: ECT2.bAug05
Length: 111
Transcript: ECT2.bAug05
Exon
Length: 97
Transcript: ECT2.bAug05
Length: 97
Transcript: ECT2.bAug05
Exon
Length: 82
Transcript: ECT2.bAug05
Length: 82
Transcript: ECT2.bAug05
Exon
Length: 79
Transcript: ECT2.bAug05
Length: 79
Transcript: ECT2.bAug05
Exon
Length: 120
Transcript: ECT2.bAug05
Length: 120
Transcript: ECT2.bAug05
Exon
Length: 139
Transcript: ECT2.bAug05
Length: 139
Transcript: ECT2.bAug05
Exon
Length: 155
Transcript: ECT2.bAug05
Length: 155
Transcript: ECT2.bAug05
Exon
Length: 108
Transcript: ECT2.bAug05
Length: 108
Transcript: ECT2.bAug05
Exon
Length: 147
Transcript: ECT2.bAug05
Length: 147
Transcript: ECT2.bAug05
Exon
Length: 1327
Transcript: ECT2.bAug05
Length: 1327
Transcript: ECT2.bAug05
Intron
Length: 1292
Transcript: ECT2.bAug05
Length: 1292
Transcript: ECT2.bAug05
Intron
Length: 2036
Transcript: ECT2.bAug05
Length: 2036
Transcript: ECT2.bAug05
Intron
Length: 637
Transcript: ECT2.bAug05
Length: 637
Transcript: ECT2.bAug05
Intron
Length: 1608
Transcript: ECT2.bAug05
Length: 1608
Transcript: ECT2.bAug05
Intron
Length: 1814
Transcript: ECT2.bAug05
Length: 1814
Transcript: ECT2.bAug05
Intron
Length: 1086
Transcript: ECT2.bAug05
Length: 1086
Transcript: ECT2.bAug05
Intron
Length: 1346
Transcript: ECT2.bAug05
Length: 1346
Transcript: ECT2.bAug05
Intron
Length: 732
Transcript: ECT2.bAug05
Length: 732
Transcript: ECT2.bAug05
Intron
Length: 144
Transcript: ECT2.bAug05
Length: 144
Transcript: ECT2.bAug05
Intron
Length: 103
Transcript: ECT2.bAug05
Length: 103
Transcript: ECT2.bAug05
Intron
Length: 1305
Transcript: ECT2.bAug05
Length: 1305
Transcript: ECT2.bAug05
Intron
Length: 4506
Transcript: ECT2.bAug05
Length: 4506
Transcript: ECT2.bAug05
Intron
Length: 4759
Transcript: ECT2.bAug05
Length: 4759
Transcript: ECT2.bAug05
Intron
Length: 8140
Transcript: ECT2.bAug05
Length: 8140
Transcript: ECT2.bAug05
Intron
Length: 1567
Transcript: ECT2.bAug05
Length: 1567
Transcript: ECT2.bAug05
Intron
Length: 797
Transcript: ECT2.bAug05
Length: 797
Transcript: ECT2.bAug05
Intron
Length: 1689
Transcript: ECT2.bAug05
Length: 1689
Transcript: ECT2.bAug05
Intron
Length: 16041
Transcript: ECT2.bAug05
Length: 16041
Transcript: ECT2.bAug05
Intron
Length: 166
Transcript: ECT2.bAug05
Length: 166
Transcript: ECT2.bAug05
Intron
Length: 2750
Transcript: ECT2.bAug05
Length: 2750
Transcript: ECT2.bAug05
Intron
Length: 1900
Transcript: ECT2.bAug05
Length: 1900
Transcript: ECT2.bAug05
Intron
Length: 7679
Transcript: ECT2.bAug05
Length: 7679
Transcript: ECT2.bAug05
Intron
Length: 979
Transcript: ECT2.bAug05
Length: 979
Transcript: ECT2.bAug05
Intron
Length: 3310
Transcript: ECT2.bAug05
Length: 3310
Transcript: ECT2.bAug05
Reaction
Expected peak: 100
Associated peak: 103,104,105,106,107,108
Repeated 51 time
Molarity: 35.42M
Forward: ECT2.F12
Reverse: ECT2.R11
Expected peak: 100
Associated peak: 103,104,105,106,107,108
Repeated 51 time
Molarity: 35.42M
Forward: ECT2.F12
Reverse: ECT2.R11
Reaction
Expected peak: 252
Associated peak: 260,261,262,263,264,265,266
Repeated 51 time
Molarity: 9.04M
Forward: ECT2.F11
Reverse: ECT2.R10
Expected peak: 252
Associated peak: 260,261,262,263,264,265,266
Repeated 51 time
Molarity: 9.04M
Forward: ECT2.F11
Reverse: ECT2.R10
Exon
Length: 69
Transcript: ECT2.cAug05
Length: 69
Transcript: ECT2.cAug05
Exon
Length: 111
Transcript: ECT2.cAug05
Length: 111
Transcript: ECT2.cAug05
Exon
Length: 97
Transcript: ECT2.cAug05
Length: 97
Transcript: ECT2.cAug05
Exon
Length: 82
Transcript: ECT2.cAug05
Length: 82
Transcript: ECT2.cAug05
Exon
Length: 79
Transcript: ECT2.cAug05
Length: 79
Transcript: ECT2.cAug05
Exon
Length: 120
Transcript: ECT2.cAug05
Length: 120
Transcript: ECT2.cAug05
Exon
Length: 139
Transcript: ECT2.cAug05
Length: 139
Transcript: ECT2.cAug05
Exon
Length: 155
Transcript: ECT2.cAug05
Length: 155
Transcript: ECT2.cAug05
Exon
Length: 108
Transcript: ECT2.cAug05
Length: 108
Transcript: ECT2.cAug05
Exon
Length: 147
Transcript: ECT2.cAug05
Length: 147
Transcript: ECT2.cAug05
Exon
Length: 267
Transcript: ECT2.cAug05
Length: 267
Transcript: ECT2.cAug05
Exon
Length: 1327
Transcript: ECT2.cAug05
Length: 1327
Transcript: ECT2.cAug05
Intron
Length: 1083
Transcript: ECT2.cAug05
Length: 1083
Transcript: ECT2.cAug05
Intron
Length: 797
Transcript: ECT2.cAug05
Length: 797
Transcript: ECT2.cAug05
Intron
Length: 1689
Transcript: ECT2.cAug05
Length: 1689
Transcript: ECT2.cAug05
Intron
Length: 16041
Transcript: ECT2.cAug05
Length: 16041
Transcript: ECT2.cAug05
Intron
Length: 166
Transcript: ECT2.cAug05
Length: 166
Transcript: ECT2.cAug05
Intron
Length: 2750
Transcript: ECT2.cAug05
Length: 2750
Transcript: ECT2.cAug05
Intron
Length: 1900
Transcript: ECT2.cAug05
Length: 1900
Transcript: ECT2.cAug05
Intron
Length: 7679
Transcript: ECT2.cAug05
Length: 7679
Transcript: ECT2.cAug05
Intron
Length: 979
Transcript: ECT2.cAug05
Length: 979
Transcript: ECT2.cAug05
Intron
Length: 1710
Transcript: ECT2.cAug05
Length: 1710
Transcript: ECT2.cAug05
Intron
Length: 1333
Transcript: ECT2.cAug05
Length: 1333
Transcript: ECT2.cAug05
Exon
Length: 102
Transcript: ECT2.dAug05
Length: 102
Transcript: ECT2.dAug05
Exon
Length: 116
Transcript: ECT2.dAug05
Length: 116
Transcript: ECT2.dAug05
Exon
Length: 63
Transcript: ECT2.dAug05
Length: 63
Transcript: ECT2.dAug05
Exon
Length: 136
Transcript: ECT2.dAug05
Length: 136
Transcript: ECT2.dAug05
Exon
Length: 137
Transcript: ECT2.dAug05
Length: 137
Transcript: ECT2.dAug05
Exon
Length: 120
Transcript: ECT2.dAug05
Length: 120
Transcript: ECT2.dAug05
Exon
Length: 69
Transcript: ECT2.dAug05
Length: 69
Transcript: ECT2.dAug05
Exon
Length: 111
Transcript: ECT2.dAug05
Length: 111
Transcript: ECT2.dAug05
Exon
Length: 82
Transcript: ECT2.dAug05
Length: 82
Transcript: ECT2.dAug05
Exon
Length: 79
Transcript: ECT2.dAug05
Length: 79
Transcript: ECT2.dAug05
Exon
Length: 120
Transcript: ECT2.dAug05
Length: 120
Transcript: ECT2.dAug05
Exon
Length: 139
Transcript: ECT2.dAug05
Length: 139
Transcript: ECT2.dAug05
Exon
Length: 155
Transcript: ECT2.dAug05
Length: 155
Transcript: ECT2.dAug05
Exon
Length: 39
Transcript: ECT2.dAug05
Length: 39
Transcript: ECT2.dAug05
Intron
Length: 144
Transcript: ECT2.dAug05
Length: 144
Transcript: ECT2.dAug05
Intron
Length: 103
Transcript: ECT2.dAug05
Length: 103
Transcript: ECT2.dAug05
Intron
Length: 1305
Transcript: ECT2.dAug05
Length: 1305
Transcript: ECT2.dAug05
Intron
Length: 4593
Transcript: ECT2.dAug05
Length: 4593
Transcript: ECT2.dAug05
Intron
Length: 4759
Transcript: ECT2.dAug05
Length: 4759
Transcript: ECT2.dAug05
Intron
Length: 8140
Transcript: ECT2.dAug05
Length: 8140
Transcript: ECT2.dAug05
Intron
Length: 1567
Transcript: ECT2.dAug05
Length: 1567
Transcript: ECT2.dAug05
Intron
Length: 2583
Transcript: ECT2.dAug05
Length: 2583
Transcript: ECT2.dAug05
Intron
Length: 16041
Transcript: ECT2.dAug05
Length: 16041
Transcript: ECT2.dAug05
Intron
Length: 166
Transcript: ECT2.dAug05
Length: 166
Transcript: ECT2.dAug05
Intron
Length: 2750
Transcript: ECT2.dAug05
Length: 2750
Transcript: ECT2.dAug05
Intron
Length: 1900
Transcript: ECT2.dAug05
Length: 1900
Transcript: ECT2.dAug05
Intron
Length: 7679
Transcript: ECT2.dAug05
Length: 7679
Transcript: ECT2.dAug05
Exon
Length: 219
Transcript: ECT2.eAug05
Length: 219
Transcript: ECT2.eAug05
Exon
Length: 108
Transcript: ECT2.eAug05
Length: 108
Transcript: ECT2.eAug05
Exon
Length: 147
Transcript: ECT2.eAug05
Length: 147
Transcript: ECT2.eAug05
Exon
Length: 267
Transcript: ECT2.eAug05
Length: 267
Transcript: ECT2.eAug05
Exon
Length: 307
Transcript: ECT2.eAug05
Length: 307
Transcript: ECT2.eAug05
Intron
Length: 7679
Transcript: ECT2.eAug05
Length: 7679
Transcript: ECT2.eAug05
Intron
Length: 979
Transcript: ECT2.eAug05
Length: 979
Transcript: ECT2.eAug05
Intron
Length: 1710
Transcript: ECT2.eAug05
Length: 1710
Transcript: ECT2.eAug05
Intron
Length: 1333
Transcript: ECT2.eAug05
Length: 1333
Transcript: ECT2.eAug05
Exon
Length: 83
Transcript: ECT2.fAug05
Length: 83
Transcript: ECT2.fAug05
Exon
Length: 152
Transcript: ECT2.fAug05
Length: 152
Transcript: ECT2.fAug05
Exon
Length: 80
Transcript: ECT2.fAug05
Length: 80
Transcript: ECT2.fAug05
Exon
Length: 93
Transcript: ECT2.fAug05
Length: 93
Transcript: ECT2.fAug05
Exon
Length: 168
Transcript: ECT2.fAug05
Length: 168
Transcript: ECT2.fAug05
Intron
Length: 3651
Transcript: ECT2.fAug05
Length: 3651
Transcript: ECT2.fAug05
Intron
Length: 634
Transcript: ECT2.fAug05
Length: 634
Transcript: ECT2.fAug05
Intron
Length: 108
Transcript: ECT2.fAug05
Length: 108
Transcript: ECT2.fAug05
Intron
Length: 1407
Transcript: ECT2.fAug05
Length: 1407
Transcript: ECT2.fAug05
Reaction
Expected peak: 193
Associated peak: 190,191,192,193,194,195,202,203,204,205
Repeated 51 time
Molarity: 9.27M
Forward: ECT2.F12
Reverse: ECT2.R11
Expected peak: 193
Associated peak: 190,191,192,193,194,195,202,203,204,205
Repeated 51 time
Molarity: 9.27M
Forward: ECT2.F12
Reverse: ECT2.R11
Exon
Length: 112
Transcript: ECT2.gAug05
Length: 112
Transcript: ECT2.gAug05
Exon
Length: 377
Transcript: ECT2.gAug05
Length: 377
Transcript: ECT2.gAug05
Intron
Length: 2750
Transcript: ECT2.gAug05
Length: 2750
Transcript: ECT2.gAug05
Exon
Length: 95
Transcript: ECT2.hAug05
Length: 95
Transcript: ECT2.hAug05
Exon
Length: 287
Transcript: ECT2.hAug05
Length: 287
Transcript: ECT2.hAug05
Exon
Length: 152
Transcript: ECT2.hAug05
Length: 152
Transcript: ECT2.hAug05
Exon
Length: 80
Transcript: ECT2.hAug05
Length: 80
Transcript: ECT2.hAug05
Exon
Length: 93
Transcript: ECT2.hAug05
Length: 93
Transcript: ECT2.hAug05
Exon
Length: 27
Transcript: ECT2.hAug05
Length: 27
Transcript: ECT2.hAug05
Intron
Length: 1292
Transcript: ECT2.hAug05
Length: 1292
Transcript: ECT2.hAug05
Intron
Length: 2072
Transcript: ECT2.hAug05
Length: 2072
Transcript: ECT2.hAug05
Intron
Length: 634
Transcript: ECT2.hAug05
Length: 634
Transcript: ECT2.hAug05
Intron
Length: 108
Transcript: ECT2.hAug05
Length: 108
Transcript: ECT2.hAug05
Intron
Length: 1407
Transcript: ECT2.hAug05
Length: 1407
Transcript: ECT2.hAug05
Reaction
Expected peak: 193
Associated peak: 190,191,192,193,194,195,202,203,204,205
Repeated 51 time
Molarity: 9.27M
Forward: ECT2.F12
Reverse: ECT2.R11
Expected peak: 193
Associated peak: 190,191,192,193,194,195,202,203,204,205
Repeated 51 time
Molarity: 9.27M
Forward: ECT2.F12
Reverse: ECT2.R11
Reaction
Expected peak: 219
Associated peak: 229,230,231,232,233,234
Repeated 51 time
Molarity: 4.30M
Forward: ECT2.F11
Reverse: ECT2.R10
Expected peak: 219
Associated peak: 229,230,231,232,233,234
Repeated 51 time
Molarity: 4.30M
Forward: ECT2.F11
Reverse: ECT2.R10
Exon
Length: 27
Transcript: ECT2.iAug05
Length: 27
Transcript: ECT2.iAug05
Exon
Length: 152
Transcript: ECT2.iAug05
Length: 152
Transcript: ECT2.iAug05
Exon
Length: 80
Transcript: ECT2.iAug05
Length: 80
Transcript: ECT2.iAug05
Exon
Length: 73
Transcript: ECT2.iAug05
Length: 73
Transcript: ECT2.iAug05
Intron
Length: 2036
Transcript: ECT2.iAug05
Length: 2036
Transcript: ECT2.iAug05
Intron
Length: 634
Transcript: ECT2.iAug05
Length: 634
Transcript: ECT2.iAug05
Intron
Length: 1608
Transcript: ECT2.iAug05
Length: 1608
Transcript: ECT2.iAug05
Reaction
Expected peak: 100
Associated peak: 103,104,105,106,107,108
Repeated 51 time
Molarity: 35.42M
Forward: ECT2.F12
Reverse: ECT2.R11
Expected peak: 100
Associated peak: 103,104,105,106,107,108
Repeated 51 time
Molarity: 35.42M
Forward: ECT2.F12
Reverse: ECT2.R11
Exon
Length: 1044
Transcript: ECT2.kAug05
Length: 1044
Transcript: ECT2.kAug05
Exon
Length: 144
Transcript: ECT2.kAug05
Length: 144
Transcript: ECT2.kAug05
Intron
Length: 1333
Transcript: ECT2.kAug05
Length: 1333
Transcript: ECT2.kAug05
Exon
Length: 438
Transcript: ECT2.shed1.aAug05
Length: 438
Transcript: ECT2.shed1.aAug05
Exon
Length: 902
Transcript: ECT2.shed2.aAug05
Length: 902
Transcript: ECT2.shed2.aAug05
ECT2.F11
CGTCCGGCCTTTCAAATG
CGTCCGGCCTTTCAAATG
ECT2.F12
GTGATATTGGTTCAAGAAGCTGG
GTGATATTGGTTCAAGAAGCTGG
ECT2.R11
CAAATTCTTCCACTGACTCCATC
CAAATTCTTCCACTGACTCCATC
ECT2.R10
CCAGCTTCTTGAACCAATATCAC
CCAGCTTCTTGAACCAATATCAC