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LGFUS Public Data
Identification of alternative splicing markers for breast cancer
2. Breast Validation Screen
Transcript map
: OGG1
Exon
Length: 447
Transcript: OGG1.aAug05
Length: 447
Transcript: OGG1.aAug05
Exon
Length: 248
Transcript: OGG1.aAug05
Length: 248
Transcript: OGG1.aAug05
Exon
Length: 180
Transcript: OGG1.aAug05
Length: 180
Transcript: OGG1.aAug05
Exon
Length: 182
Transcript: OGG1.aAug05
Length: 182
Transcript: OGG1.aAug05
Exon
Length: 151
Transcript: OGG1.aAug05
Length: 151
Transcript: OGG1.aAug05
Exon
Length: 50
Transcript: OGG1.aAug05
Length: 50
Transcript: OGG1.aAug05
Exon
Length: 850
Transcript: OGG1.aAug05
Length: 850
Transcript: OGG1.aAug05
Intron
Length: 521
Transcript: OGG1.aAug05
Length: 521
Transcript: OGG1.aAug05
Intron
Length: 577
Transcript: OGG1.aAug05
Length: 577
Transcript: OGG1.aAug05
Intron
Length: 2754
Transcript: OGG1.aAug05
Length: 2754
Transcript: OGG1.aAug05
Intron
Length: 1585
Transcript: OGG1.aAug05
Length: 1585
Transcript: OGG1.aAug05
Intron
Length: 145
Transcript: OGG1.aAug05
Length: 145
Transcript: OGG1.aAug05
Intron
Length: 8992
Transcript: OGG1.aAug05
Length: 8992
Transcript: OGG1.aAug05
Reaction
Expected peak: 343
Associated peak: 359,376,377,378,379,380,381,382,383
Repeated 51 time
Molarity: 13.50M
Forward: OGG1.u.f.16
Reverse: OGG1.u.r.28
Expected peak: 343
Associated peak: 359,376,377,378,379,380,381,382,383
Repeated 51 time
Molarity: 13.50M
Forward: OGG1.u.f.16
Reverse: OGG1.u.r.28
Exon
Length: 1403
Transcript: OGG1.bAug05
Length: 1403
Transcript: OGG1.bAug05
Exon
Length: 248
Transcript: OGG1.bAug05
Length: 248
Transcript: OGG1.bAug05
Exon
Length: 180
Transcript: OGG1.bAug05
Length: 180
Transcript: OGG1.bAug05
Exon
Length: 182
Transcript: OGG1.bAug05
Length: 182
Transcript: OGG1.bAug05
Exon
Length: 151
Transcript: OGG1.bAug05
Length: 151
Transcript: OGG1.bAug05
Exon
Length: 50
Transcript: OGG1.bAug05
Length: 50
Transcript: OGG1.bAug05
Exon
Length: 364
Transcript: OGG1.bAug05
Length: 364
Transcript: OGG1.bAug05
Intron
Length: 521
Transcript: OGG1.bAug05
Length: 521
Transcript: OGG1.bAug05
Intron
Length: 577
Transcript: OGG1.bAug05
Length: 577
Transcript: OGG1.bAug05
Intron
Length: 2754
Transcript: OGG1.bAug05
Length: 2754
Transcript: OGG1.bAug05
Intron
Length: 1585
Transcript: OGG1.bAug05
Length: 1585
Transcript: OGG1.bAug05
Intron
Length: 145
Transcript: OGG1.bAug05
Length: 145
Transcript: OGG1.bAug05
Intron
Length: 227
Transcript: OGG1.bAug05
Length: 227
Transcript: OGG1.bAug05
Exon
Length: 454
Transcript: OGG1.cAug05
Length: 454
Transcript: OGG1.cAug05
Exon
Length: 248
Transcript: OGG1.cAug05
Length: 248
Transcript: OGG1.cAug05
Exon
Length: 180
Transcript: OGG1.cAug05
Length: 180
Transcript: OGG1.cAug05
Exon
Length: 182
Transcript: OGG1.cAug05
Length: 182
Transcript: OGG1.cAug05
Exon
Length: 929
Transcript: OGG1.cAug05
Length: 929
Transcript: OGG1.cAug05
Intron
Length: 521
Transcript: OGG1.cAug05
Length: 521
Transcript: OGG1.cAug05
Intron
Length: 577
Transcript: OGG1.cAug05
Length: 577
Transcript: OGG1.cAug05
Intron
Length: 2754
Transcript: OGG1.cAug05
Length: 2754
Transcript: OGG1.cAug05
Intron
Length: 10923
Transcript: OGG1.cAug05
Length: 10923
Transcript: OGG1.cAug05
Reaction
Expected peak: 142
Associated peak: 156,157,158,159
Repeated 51 time
Molarity: 6.12M
Forward: OGG1.u.f.16
Reverse: OGG1.u.r.28
Expected peak: 142
Associated peak: 156,157,158,159
Repeated 51 time
Molarity: 6.12M
Forward: OGG1.u.f.16
Reverse: OGG1.u.r.28
Exon
Length: 454
Transcript: OGG1.dAug05
Length: 454
Transcript: OGG1.dAug05
Exon
Length: 248
Transcript: OGG1.dAug05
Length: 248
Transcript: OGG1.dAug05
Exon
Length: 180
Transcript: OGG1.dAug05
Length: 180
Transcript: OGG1.dAug05
Exon
Length: 182
Transcript: OGG1.dAug05
Length: 182
Transcript: OGG1.dAug05
Exon
Length: 151
Transcript: OGG1.dAug05
Length: 151
Transcript: OGG1.dAug05
Exon
Length: 50
Transcript: OGG1.dAug05
Length: 50
Transcript: OGG1.dAug05
Exon
Length: 100
Transcript: OGG1.dAug05
Length: 100
Transcript: OGG1.dAug05
Exon
Length: 821
Transcript: OGG1.dAug05
Length: 821
Transcript: OGG1.dAug05
Intron
Length: 521
Transcript: OGG1.dAug05
Length: 521
Transcript: OGG1.dAug05
Intron
Length: 577
Transcript: OGG1.dAug05
Length: 577
Transcript: OGG1.dAug05
Intron
Length: 2754
Transcript: OGG1.dAug05
Length: 2754
Transcript: OGG1.dAug05
Intron
Length: 1585
Transcript: OGG1.dAug05
Length: 1585
Transcript: OGG1.dAug05
Intron
Length: 145
Transcript: OGG1.dAug05
Length: 145
Transcript: OGG1.dAug05
Intron
Length: 2370
Transcript: OGG1.dAug05
Length: 2370
Transcript: OGG1.dAug05
Intron
Length: 6522
Transcript: OGG1.dAug05
Length: 6522
Transcript: OGG1.dAug05
Reaction
Expected peak: 443
Associated peak: 431,433,434,435,436,437,438,439,440,441,460,466,468,476,493
Repeated 51 time
Molarity: 1.21M
Forward: OGG1.u.f.16
Reverse: OGG1.u.r.28
Expected peak: 443
Associated peak: 431,433,434,435,436,437,438,439,440,441,460,466,468,476,493
Repeated 51 time
Molarity: 1.21M
Forward: OGG1.u.f.16
Reverse: OGG1.u.r.28
Exon
Length: 1403
Transcript: OGG1.eAug05
Length: 1403
Transcript: OGG1.eAug05
Exon
Length: 248
Transcript: OGG1.eAug05
Length: 248
Transcript: OGG1.eAug05
Exon
Length: 180
Transcript: OGG1.eAug05
Length: 180
Transcript: OGG1.eAug05
Exon
Length: 182
Transcript: OGG1.eAug05
Length: 182
Transcript: OGG1.eAug05
Exon
Length: 151
Transcript: OGG1.eAug05
Length: 151
Transcript: OGG1.eAug05
Exon
Length: 50
Transcript: OGG1.eAug05
Length: 50
Transcript: OGG1.eAug05
Exon
Length: 351
Transcript: OGG1.eAug05
Length: 351
Transcript: OGG1.eAug05
Intron
Length: 521
Transcript: OGG1.eAug05
Length: 521
Transcript: OGG1.eAug05
Intron
Length: 577
Transcript: OGG1.eAug05
Length: 577
Transcript: OGG1.eAug05
Intron
Length: 2754
Transcript: OGG1.eAug05
Length: 2754
Transcript: OGG1.eAug05
Intron
Length: 1585
Transcript: OGG1.eAug05
Length: 1585
Transcript: OGG1.eAug05
Intron
Length: 145
Transcript: OGG1.eAug05
Length: 145
Transcript: OGG1.eAug05
Intron
Length: 244
Transcript: OGG1.eAug05
Length: 244
Transcript: OGG1.eAug05
Exon
Length: 1403
Transcript: OGG1.fAug05
Length: 1403
Transcript: OGG1.fAug05
Exon
Length: 248
Transcript: OGG1.fAug05
Length: 248
Transcript: OGG1.fAug05
Exon
Length: 180
Transcript: OGG1.fAug05
Length: 180
Transcript: OGG1.fAug05
Exon
Length: 182
Transcript: OGG1.fAug05
Length: 182
Transcript: OGG1.fAug05
Exon
Length: 151
Transcript: OGG1.fAug05
Length: 151
Transcript: OGG1.fAug05
Exon
Length: 638
Transcript: OGG1.fAug05
Length: 638
Transcript: OGG1.fAug05
Intron
Length: 521
Transcript: OGG1.fAug05
Length: 521
Transcript: OGG1.fAug05
Intron
Length: 577
Transcript: OGG1.fAug05
Length: 577
Transcript: OGG1.fAug05
Intron
Length: 2754
Transcript: OGG1.fAug05
Length: 2754
Transcript: OGG1.fAug05
Intron
Length: 1585
Transcript: OGG1.fAug05
Length: 1585
Transcript: OGG1.fAug05
Intron
Length: 145
Transcript: OGG1.fAug05
Length: 145
Transcript: OGG1.fAug05
Reaction
Expected peak: 457
Associated peak: 493,495,498,500,506,507,513,514
Repeated 51 time
Molarity: 8.17M
Forward: OGG1.u.f.12
Reverse: OGG1.u.r.14
Expected peak: 457
Associated peak: 493,495,498,500,506,507,513,514
Repeated 51 time
Molarity: 8.17M
Forward: OGG1.u.f.12
Reverse: OGG1.u.r.14
Exon
Length: 454
Transcript: OGG1.gAug05
Length: 454
Transcript: OGG1.gAug05
Exon
Length: 248
Transcript: OGG1.gAug05
Length: 248
Transcript: OGG1.gAug05
Exon
Length: 180
Transcript: OGG1.gAug05
Length: 180
Transcript: OGG1.gAug05
Exon
Length: 182
Transcript: OGG1.gAug05
Length: 182
Transcript: OGG1.gAug05
Exon
Length: 151
Transcript: OGG1.gAug05
Length: 151
Transcript: OGG1.gAug05
Exon
Length: 50
Transcript: OGG1.gAug05
Length: 50
Transcript: OGG1.gAug05
Exon
Length: 53
Transcript: OGG1.gAug05
Length: 53
Transcript: OGG1.gAug05
Exon
Length: 821
Transcript: OGG1.gAug05
Length: 821
Transcript: OGG1.gAug05
Intron
Length: 521
Transcript: OGG1.gAug05
Length: 521
Transcript: OGG1.gAug05
Intron
Length: 577
Transcript: OGG1.gAug05
Length: 577
Transcript: OGG1.gAug05
Intron
Length: 2754
Transcript: OGG1.gAug05
Length: 2754
Transcript: OGG1.gAug05
Intron
Length: 1585
Transcript: OGG1.gAug05
Length: 1585
Transcript: OGG1.gAug05
Intron
Length: 145
Transcript: OGG1.gAug05
Length: 145
Transcript: OGG1.gAug05
Intron
Length: 2417
Transcript: OGG1.gAug05
Length: 2417
Transcript: OGG1.gAug05
Intron
Length: 6522
Transcript: OGG1.gAug05
Length: 6522
Transcript: OGG1.gAug05
Reaction
Expected peak: 396
Associated peak: 378,380,431,433,434,435,436,437,438,439,440,441
Repeated 51 time
Molarity: 2.25M
Forward: OGG1.u.f.16
Reverse: OGG1.u.r.28
Expected peak: 396
Associated peak: 378,380,431,433,434,435,436,437,438,439,440,441
Repeated 51 time
Molarity: 2.25M
Forward: OGG1.u.f.16
Reverse: OGG1.u.r.28
Exon
Length: 454
Transcript: OGG1.hAug05
Length: 454
Transcript: OGG1.hAug05
Exon
Length: 248
Transcript: OGG1.hAug05
Length: 248
Transcript: OGG1.hAug05
Exon
Length: 180
Transcript: OGG1.hAug05
Length: 180
Transcript: OGG1.hAug05
Exon
Length: 821
Transcript: OGG1.hAug05
Length: 821
Transcript: OGG1.hAug05
Intron
Length: 521
Transcript: OGG1.hAug05
Length: 521
Transcript: OGG1.hAug05
Intron
Length: 577
Transcript: OGG1.hAug05
Length: 577
Transcript: OGG1.hAug05
Intron
Length: 13859
Transcript: OGG1.hAug05
Length: 13859
Transcript: OGG1.hAug05
Exon
Length: 78
Transcript: OGG1.iAug05
Length: 78
Transcript: OGG1.iAug05
Exon
Length: 180
Transcript: OGG1.iAug05
Length: 180
Transcript: OGG1.iAug05
Exon
Length: 182
Transcript: OGG1.iAug05
Length: 182
Transcript: OGG1.iAug05
Exon
Length: 151
Transcript: OGG1.iAug05
Length: 151
Transcript: OGG1.iAug05
Exon
Length: 262
Transcript: OGG1.iAug05
Length: 262
Transcript: OGG1.iAug05
Intron
Length: 1346
Transcript: OGG1.iAug05
Length: 1346
Transcript: OGG1.iAug05
Intron
Length: 2754
Transcript: OGG1.iAug05
Length: 2754
Transcript: OGG1.iAug05
Intron
Length: 1585
Transcript: OGG1.iAug05
Length: 1585
Transcript: OGG1.iAug05
Intron
Length: 145
Transcript: OGG1.iAug05
Length: 145
Transcript: OGG1.iAug05
Reaction
Expected peak: 457
Associated peak: 493,495,498,500,506,507,513,514
Repeated 51 time
Molarity: 8.17M
Forward: OGG1.u.f.12
Reverse: OGG1.u.r.14
Expected peak: 457
Associated peak: 493,495,498,500,506,507,513,514
Repeated 51 time
Molarity: 8.17M
Forward: OGG1.u.f.12
Reverse: OGG1.u.r.14
Exon
Length: 134
Transcript: OGG1.jAug05
Length: 134
Transcript: OGG1.jAug05
Exon
Length: 248
Transcript: OGG1.jAug05
Length: 248
Transcript: OGG1.jAug05
Exon
Length: 188
Transcript: OGG1.jAug05
Length: 188
Transcript: OGG1.jAug05
Exon
Length: 76
Transcript: OGG1.jAug05
Length: 76
Transcript: OGG1.jAug05
Intron
Length: 521
Transcript: OGG1.jAug05
Length: 521
Transcript: OGG1.jAug05
Intron
Length: 577
Transcript: OGG1.jAug05
Length: 577
Transcript: OGG1.jAug05
Intron
Length: 29555
Transcript: OGG1.jAug05
Length: 29555
Transcript: OGG1.jAug05
Exon
Length: 47
Transcript: OGG1.kAug05
Length: 47
Transcript: OGG1.kAug05
Exon
Length: 182
Transcript: OGG1.kAug05
Length: 182
Transcript: OGG1.kAug05
Exon
Length: 50
Transcript: OGG1.kAug05
Length: 50
Transcript: OGG1.kAug05
Exon
Length: 268
Transcript: OGG1.kAug05
Length: 268
Transcript: OGG1.kAug05
Intron
Length: 2754
Transcript: OGG1.kAug05
Length: 2754
Transcript: OGG1.kAug05
Intron
Length: 1881
Transcript: OGG1.kAug05
Length: 1881
Transcript: OGG1.kAug05
Intron
Length: 244
Transcript: OGG1.kAug05
Length: 244
Transcript: OGG1.kAug05
Exon
Length: 47
Transcript: OGG1.lAug05
Length: 47
Transcript: OGG1.lAug05
Exon
Length: 151
Transcript: OGG1.lAug05
Length: 151
Transcript: OGG1.lAug05
Exon
Length: 50
Transcript: OGG1.lAug05
Length: 50
Transcript: OGG1.lAug05
Exon
Length: 362
Transcript: OGG1.lAug05
Length: 362
Transcript: OGG1.lAug05
Intron
Length: 4521
Transcript: OGG1.lAug05
Length: 4521
Transcript: OGG1.lAug05
Intron
Length: 145
Transcript: OGG1.lAug05
Length: 145
Transcript: OGG1.lAug05
Intron
Length: 227
Transcript: OGG1.lAug05
Length: 227
Transcript: OGG1.lAug05
Exon
Length: 69
Transcript: OGG1.mAug05
Length: 69
Transcript: OGG1.mAug05
Exon
Length: 248
Transcript: OGG1.mAug05
Length: 248
Transcript: OGG1.mAug05
Exon
Length: 180
Transcript: OGG1.mAug05
Length: 180
Transcript: OGG1.mAug05
Exon
Length: 151
Transcript: OGG1.mAug05
Length: 151
Transcript: OGG1.mAug05
Exon
Length: 99
Transcript: OGG1.mAug05
Length: 99
Transcript: OGG1.mAug05
Intron
Length: 521
Transcript: OGG1.mAug05
Length: 521
Transcript: OGG1.mAug05
Intron
Length: 577
Transcript: OGG1.mAug05
Length: 577
Transcript: OGG1.mAug05
Intron
Length: 4521
Transcript: OGG1.mAug05
Length: 4521
Transcript: OGG1.mAug05
Intron
Length: 145
Transcript: OGG1.mAug05
Length: 145
Transcript: OGG1.mAug05
Reaction
Expected peak: 275
Associated peak: 287,288,289,290,291
Repeated 51 time
Molarity: 0.43M
Forward: OGG1.u.f.12
Reverse: OGG1.u.r.14
Expected peak: 275
Associated peak: 287,288,289,290,291
Repeated 51 time
Molarity: 0.43M
Forward: OGG1.u.f.12
Reverse: OGG1.u.r.14
Exon
Length: 406
Transcript: OGG1.nAug05
Length: 406
Transcript: OGG1.nAug05
Exon
Length: 528
Transcript: OGG1.nAug05
Length: 528
Transcript: OGG1.nAug05
Exon
Length: 325
Transcript: OGG1.nAug05
Length: 325
Transcript: OGG1.nAug05
Intron
Length: 241
Transcript: OGG1.nAug05
Length: 241
Transcript: OGG1.nAug05
Intron
Length: 577
Transcript: OGG1.nAug05
Length: 577
Transcript: OGG1.nAug05
Exon
Length: 114
Transcript: OGG1.oAug05
Length: 114
Transcript: OGG1.oAug05
Exon
Length: 151
Transcript: OGG1.oAug05
Length: 151
Transcript: OGG1.oAug05
Exon
Length: 50
Transcript: OGG1.oAug05
Length: 50
Transcript: OGG1.oAug05
Exon
Length: 345
Transcript: OGG1.oAug05
Length: 345
Transcript: OGG1.oAug05
Intron
Length: 4521
Transcript: OGG1.oAug05
Length: 4521
Transcript: OGG1.oAug05
Intron
Length: 145
Transcript: OGG1.oAug05
Length: 145
Transcript: OGG1.oAug05
Intron
Length: 244
Transcript: OGG1.oAug05
Length: 244
Transcript: OGG1.oAug05
Exon
Length: 114
Transcript: OGG1.pAug05
Length: 114
Transcript: OGG1.pAug05
Exon
Length: 180
Transcript: OGG1.pAug05
Length: 180
Transcript: OGG1.pAug05
Exon
Length: 88
Transcript: OGG1.pAug05
Length: 88
Transcript: OGG1.pAug05
Exon
Length: 121
Transcript: OGG1.pAug05
Length: 121
Transcript: OGG1.pAug05
Intron
Length: 577
Transcript: OGG1.pAug05
Length: 577
Transcript: OGG1.pAug05
Intron
Length: 29563
Transcript: OGG1.pAug05
Length: 29563
Transcript: OGG1.pAug05
Intron
Length: 1380
Transcript: OGG1.pAug05
Length: 1380
Transcript: OGG1.pAug05
Exon
Length: 47
Transcript: OGG1.qAug05
Length: 47
Transcript: OGG1.qAug05
Exon
Length: 585
Transcript: OGG1.qAug05
Length: 585
Transcript: OGG1.qAug05
Intron
Length: 4817
Transcript: OGG1.qAug05
Length: 4817
Transcript: OGG1.qAug05
Reaction
Expected peak: 124
Associated peak: 129,130,131,132,133
Repeated 51 time
Molarity: 1.36M
Forward: OGG1.u.f.12
Reverse: OGG1.u.r.14
Expected peak: 124
Associated peak: 129,130,131,132,133
Repeated 51 time
Molarity: 1.36M
Forward: OGG1.u.f.12
Reverse: OGG1.u.r.14
Exon
Length: 341
Transcript: OGG1.rAug05
Length: 341
Transcript: OGG1.rAug05
Exon
Length: 151
Transcript: OGG1.rAug05
Length: 151
Transcript: OGG1.rAug05
Exon
Length: 369
Transcript: OGG1.rAug05
Length: 369
Transcript: OGG1.rAug05
Intron
Length: 6047
Transcript: OGG1.rAug05
Length: 6047
Transcript: OGG1.rAug05
Intron
Length: 145
Transcript: OGG1.rAug05
Length: 145
Transcript: OGG1.rAug05
Exon
Length: 47
Transcript: OGG1.sAug05
Length: 47
Transcript: OGG1.sAug05
Exon
Length: 50
Transcript: OGG1.sAug05
Length: 50
Transcript: OGG1.sAug05
Exon
Length: 131
Transcript: OGG1.sAug05
Length: 131
Transcript: OGG1.sAug05
Intron
Length: 4817
Transcript: OGG1.sAug05
Length: 4817
Transcript: OGG1.sAug05
Intron
Length: 244
Transcript: OGG1.sAug05
Length: 244
Transcript: OGG1.sAug05
Exon
Length: 670
Transcript: OGG1.shed1.aAug05
Length: 670
Transcript: OGG1.shed1.aAug05
Exon
Length: 1099
Transcript: OGG1.shed2.aAug05
Length: 1099
Transcript: OGG1.shed2.aAug05
Exon
Length: 815
Transcript: OGG1.shed3.aAug05
Length: 815
Transcript: OGG1.shed3.aAug05
Exon
Length: 941
Transcript: OGG1.shed4.aAug05
Length: 941
Transcript: OGG1.shed4.aAug05
Exon
Length: 76
Transcript: OGG1.tAug05
Length: 76
Transcript: OGG1.tAug05
Exon
Length: 88
Transcript: OGG1.tAug05
Length: 88
Transcript: OGG1.tAug05
Exon
Length: 530
Transcript: OGG1.tAug05
Length: 530
Transcript: OGG1.tAug05
Intron
Length: 29563
Transcript: OGG1.tAug05
Length: 29563
Transcript: OGG1.tAug05
Intron
Length: 6127
Transcript: OGG1.tAug05
Length: 6127
Transcript: OGG1.tAug05
OGG1.u.r.28
GAGGTGATCCTGGCAGAAGA
GAGGTGATCCTGGCAGAAGA
OGG1.u.r.14
GGAAACCTAGGGAGGACACC
GGAAACCTAGGGAGGACACC
OGG1.u.f.16
GCAGCAGCTACGAGAGTCCT
GCAGCAGCTACGAGAGTCCT
OGG1.u.f.12
TGTCACCTACCATGGCTTCC
TGTCACCTACCATGGCTTCC