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LGFUS Public Data
Identification of alternative splicing markers for breast cancer
2. Breast Validation Screen
Transcript map
: BTC
Exon
Length: 425
Transcript: BTC.aAug05
Length: 425
Transcript: BTC.aAug05
Exon
Length: 99
Transcript: BTC.aAug05
Length: 99
Transcript: BTC.aAug05
Exon
Length: 118
Transcript: BTC.aAug05
Length: 118
Transcript: BTC.aAug05
Exon
Length: 147
Transcript: BTC.aAug05
Length: 147
Transcript: BTC.aAug05
Exon
Length: 110
Transcript: BTC.aAug05
Length: 110
Transcript: BTC.aAug05
Exon
Length: 1125
Transcript: BTC.aAug05
Length: 1125
Transcript: BTC.aAug05
Exon
Length: 255
Transcript: BTC.aAug05
Length: 255
Transcript: BTC.aAug05
Intron
Length: 24105
Transcript: BTC.aAug05
Length: 24105
Transcript: BTC.aAug05
Intron
Length: 14081
Transcript: BTC.aAug05
Length: 14081
Transcript: BTC.aAug05
Intron
Length: 5139
Transcript: BTC.aAug05
Length: 5139
Transcript: BTC.aAug05
Intron
Length: 2423
Transcript: BTC.aAug05
Length: 2423
Transcript: BTC.aAug05
Intron
Length: 1364
Transcript: BTC.aAug05
Length: 1364
Transcript: BTC.aAug05
Intron
Length: 534
Transcript: BTC.aAug05
Length: 534
Transcript: BTC.aAug05
Reaction
Expected peak: 278
Associated peak: 283,284,285,286,288,292,294,295,296
Repeated 51 time
Molarity: 15.11M
Forward: BTC.F2
Reverse: BTC.R2
Expected peak: 278
Associated peak: 283,284,285,286,288,292,294,295,296
Repeated 51 time
Molarity: 15.11M
Forward: BTC.F2
Reverse: BTC.R2
Reaction
Expected peak: 284
Associated peak: 291,292,293,294,295,297
Repeated 51 time
Molarity: 17.24M
Forward: BTC.F1
Reverse: BTC.R1
Expected peak: 284
Associated peak: 291,292,293,294,295,297
Repeated 51 time
Molarity: 17.24M
Forward: BTC.F1
Reverse: BTC.R1
Exon
Length: 233
Transcript: BTC.bAug05
Length: 233
Transcript: BTC.bAug05
Exon
Length: 99
Transcript: BTC.bAug05
Length: 99
Transcript: BTC.bAug05
Exon
Length: 118
Transcript: BTC.bAug05
Length: 118
Transcript: BTC.bAug05
Exon
Length: 110
Transcript: BTC.bAug05
Length: 110
Transcript: BTC.bAug05
Exon
Length: 286
Transcript: BTC.bAug05
Length: 286
Transcript: BTC.bAug05
Intron
Length: 24105
Transcript: BTC.bAug05
Length: 24105
Transcript: BTC.bAug05
Intron
Length: 14081
Transcript: BTC.bAug05
Length: 14081
Transcript: BTC.bAug05
Intron
Length: 7709
Transcript: BTC.bAug05
Length: 7709
Transcript: BTC.bAug05
Intron
Length: 1364
Transcript: BTC.bAug05
Length: 1364
Transcript: BTC.bAug05
Reaction
Expected peak: 131
Associated peak: 139,140,141,142,143,149,151,152
Repeated 51 time
Molarity: 10.35M
Forward: BTC.F2
Reverse: BTC.R2
Expected peak: 131
Associated peak: 139,140,141,142,143,149,151,152
Repeated 51 time
Molarity: 10.35M
Forward: BTC.F2
Reverse: BTC.R2
Reaction
Expected peak: 137
Associated peak: 149,150,151,152,158
Repeated 51 time
Molarity: 12.85M
Forward: BTC.F1
Reverse: BTC.R1
Expected peak: 137
Associated peak: 149,150,151,152,158
Repeated 51 time
Molarity: 12.85M
Forward: BTC.F1
Reverse: BTC.R1
Exon
Length: 1050
Transcript: BTC.shed1.aAug05
Length: 1050
Transcript: BTC.shed1.aAug05
Exon
Length: 387
Transcript: BTC.shed2.aAug05
Length: 387
Transcript: BTC.shed2.aAug05
Exon
Length: 464
Transcript: BTC.shed3.aAug05
Length: 464
Transcript: BTC.shed3.aAug05
BTC.R1
TTACGACGTTTCCGAAGAGG
TTACGACGTTTCCGAAGAGG
BTC.R2
CCCAGAGTTTCCATTTCTTCTTC
CCCAGAGTTTCCATTTCTTCTTC
BTC.F2
CCCAAGCAATACAAGCATTACTG
CCCAAGCAATACAAGCATTACTG
BTC.F1
ACCACCACACAATCAAAGCG
ACCACCACACAATCAAAGCG