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LGFUS Public Data
Identification of alternative splicing markers for breast cancer
2. Breast Validation Screen
Transcript map
: EPGN
Exon
Length: 85
Transcript: EPGN.aAug05
Length: 85
Transcript: EPGN.aAug05
Exon
Length: 90
Transcript: EPGN.aAug05
Length: 90
Transcript: EPGN.aAug05
Exon
Length: 121
Transcript: EPGN.aAug05
Length: 121
Transcript: EPGN.aAug05
Exon
Length: 153
Transcript: EPGN.aAug05
Length: 153
Transcript: EPGN.aAug05
Exon
Length: 165
Transcript: EPGN.aAug05
Length: 165
Transcript: EPGN.aAug05
Intron
Length: 516
Transcript: EPGN.aAug05
Length: 516
Transcript: EPGN.aAug05
Intron
Length: 3002
Transcript: EPGN.aAug05
Length: 3002
Transcript: EPGN.aAug05
Intron
Length: 712
Transcript: EPGN.aAug05
Length: 712
Transcript: EPGN.aAug05
Intron
Length: 1409
Transcript: EPGN.aAug05
Length: 1409
Transcript: EPGN.aAug05
Reaction
Expected peak: 173
Associated peak: 186,187,188,189,190,191,196,197
Repeated 51 time
Molarity: 15.78M
Forward: EPGN.F3
Reverse: EPGN.R4
Expected peak: 173
Associated peak: 186,187,188,189,190,191,196,197
Repeated 51 time
Molarity: 15.78M
Forward: EPGN.F3
Reverse: EPGN.R4
Exon
Length: 107
Transcript: EPGN.bAug05
Length: 107
Transcript: EPGN.bAug05
Exon
Length: 63
Transcript: EPGN.bAug05
Length: 63
Transcript: EPGN.bAug05
Exon
Length: 121
Transcript: EPGN.bAug05
Length: 121
Transcript: EPGN.bAug05
Exon
Length: 573
Transcript: EPGN.bAug05
Length: 573
Transcript: EPGN.bAug05
Intron
Length: 516
Transcript: EPGN.bAug05
Length: 516
Transcript: EPGN.bAug05
Intron
Length: 3029
Transcript: EPGN.bAug05
Length: 3029
Transcript: EPGN.bAug05
Intron
Length: 712
Transcript: EPGN.bAug05
Length: 712
Transcript: EPGN.bAug05
Reaction
Expected peak: 146
Associated peak: 158,159,160,161,162,167
Repeated 51 time
Molarity: 4.70M
Forward: EPGN.F3
Reverse: EPGN.R4
Expected peak: 146
Associated peak: 158,159,160,161,162,167
Repeated 51 time
Molarity: 4.70M
Forward: EPGN.F3
Reverse: EPGN.R4
Exon
Length: 59
Transcript: EPGN.cAug05
Length: 59
Transcript: EPGN.cAug05
Exon
Length: 121
Transcript: EPGN.cAug05
Length: 121
Transcript: EPGN.cAug05
Exon
Length: 153
Transcript: EPGN.cAug05
Length: 153
Transcript: EPGN.cAug05
Exon
Length: 321
Transcript: EPGN.cAug05
Length: 321
Transcript: EPGN.cAug05
Intron
Length: 3029
Transcript: EPGN.cAug05
Length: 3029
Transcript: EPGN.cAug05
Intron
Length: 712
Transcript: EPGN.cAug05
Length: 712
Transcript: EPGN.cAug05
Intron
Length: 1409
Transcript: EPGN.cAug05
Length: 1409
Transcript: EPGN.cAug05
Reaction
Expected peak: 146
Associated peak: 158,159,160,161,162,167
Repeated 51 time
Molarity: 4.70M
Forward: EPGN.F3
Reverse: EPGN.R4
Expected peak: 146
Associated peak: 158,159,160,161,162,167
Repeated 51 time
Molarity: 4.70M
Forward: EPGN.F3
Reverse: EPGN.R4
Exon
Length: 99
Transcript: EPGN.dAug05
Length: 99
Transcript: EPGN.dAug05
Exon
Length: 90
Transcript: EPGN.dAug05
Length: 90
Transcript: EPGN.dAug05
Exon
Length: 121
Transcript: EPGN.dAug05
Length: 121
Transcript: EPGN.dAug05
Exon
Length: 27
Transcript: EPGN.dAug05
Length: 27
Transcript: EPGN.dAug05
Exon
Length: 1390
Transcript: EPGN.dAug05
Length: 1390
Transcript: EPGN.dAug05
Intron
Length: 516
Transcript: EPGN.dAug05
Length: 516
Transcript: EPGN.dAug05
Intron
Length: 3002
Transcript: EPGN.dAug05
Length: 3002
Transcript: EPGN.dAug05
Intron
Length: 712
Transcript: EPGN.dAug05
Length: 712
Transcript: EPGN.dAug05
Intron
Length: 1535
Transcript: EPGN.dAug05
Length: 1535
Transcript: EPGN.dAug05
Reaction
Expected peak: 173
Associated peak: 186,187,188,189,190,191,196,197
Repeated 51 time
Molarity: 15.78M
Forward: EPGN.F3
Reverse: EPGN.R4
Expected peak: 173
Associated peak: 186,187,188,189,190,191,196,197
Repeated 51 time
Molarity: 15.78M
Forward: EPGN.F3
Reverse: EPGN.R4
Exon
Length: 67
Transcript: EPGN.eAug05
Length: 67
Transcript: EPGN.eAug05
Exon
Length: 90
Transcript: EPGN.eAug05
Length: 90
Transcript: EPGN.eAug05
Exon
Length: 121
Transcript: EPGN.eAug05
Length: 121
Transcript: EPGN.eAug05
Exon
Length: 530
Transcript: EPGN.eAug05
Length: 530
Transcript: EPGN.eAug05
Intron
Length: 516
Transcript: EPGN.eAug05
Length: 516
Transcript: EPGN.eAug05
Intron
Length: 3002
Transcript: EPGN.eAug05
Length: 3002
Transcript: EPGN.eAug05
Intron
Length: 2274
Transcript: EPGN.eAug05
Length: 2274
Transcript: EPGN.eAug05
Reaction
Expected peak: 173
Associated peak: 186,187,188,189,190,191,196,197
Repeated 51 time
Molarity: 15.78M
Forward: EPGN.F3
Reverse: EPGN.R4
Expected peak: 173
Associated peak: 186,187,188,189,190,191,196,197
Repeated 51 time
Molarity: 15.78M
Forward: EPGN.F3
Reverse: EPGN.R4
EPGN.R4
GATGGCTTTCTCTAGCTCATGG
GATGGCTTTCTCTAGCTCATGG
EPGN.F3
CTGTAACACCTCCAATCACAGC
CTGTAACACCTCCAATCACAGC