2. Breast Validation Screen - Rnomics 📊 Palace

qPCR Assay Search

        ☰
    
        Rnomics 📊 Palace
    
                       Back to Rnomics Platform
            
                       Open Session

1 warning:

Access restricted to public data.
Please sign in at Rnomics Platform to access your data.

Navigation

Home Public data LGFUS Public Data Identification of alternative splicing markers for breast cancer 2. Breast Validation Screen

Permalink: please use this URL instead of your browser's location bar.

https://rnomics.med.usherbrooke.ca/palace?purl=/data/related/3/gene/441121

2. Breast Validation Screen ⚙

Transcript map : APC

Exon
Length: 39
Transcript: APC.aAug05

Exon
Length: 153
Transcript: APC.aAug05

Exon
Length: 85
Transcript: APC.aAug05

Exon
Length: 202
Transcript: APC.aAug05

Exon
Length: 109
Transcript: APC.aAug05

Exon
Length: 114
Transcript: APC.aAug05

Exon
Length: 84
Transcript: APC.aAug05

Exon
Length: 105
Transcript: APC.aAug05

Exon
Length: 99
Transcript: APC.aAug05

Exon
Length: 379
Transcript: APC.aAug05

Exon
Length: 96
Transcript: APC.aAug05

Exon
Length: 140
Transcript: APC.aAug05

Exon
Length: 78
Transcript: APC.aAug05

Exon
Length: 117
Transcript: APC.aAug05

Exon
Length: 215
Transcript: APC.aAug05

Exon
Length: 8687
Transcript: APC.aAug05

Intron
Length: 16947
Transcript: APC.aAug05

Intron
Length: 11300
Transcript: APC.aAug05

Intron
Length: 778
Transcript: APC.aAug05

Intron
Length: 8238
Transcript: APC.aAug05

Intron
Length: 5052
Transcript: APC.aAug05

Intron
Length: 11542
Transcript: APC.aAug05

Intron
Length: 8749
Transcript: APC.aAug05

Intron
Length: 14111
Transcript: APC.aAug05

Intron
Length: 3372
Transcript: APC.aAug05

Intron
Length: 2551
Transcript: APC.aAug05

Intron
Length: 5116
Transcript: APC.aAug05

Intron
Length: 681
Transcript: APC.aAug05

Intron
Length: 849
Transcript: APC.aAug05

Intron
Length: 5978
Transcript: APC.aAug05

Intron
Length: 2387
Transcript: APC.aAug05

Exon
Length: 31
Transcript: APC.bAug05

Exon
Length: 108
Transcript: APC.bAug05

Exon
Length: 153
Transcript: APC.bAug05

Exon
Length: 85
Transcript: APC.bAug05

Exon
Length: 202
Transcript: APC.bAug05

Exon
Length: 109
Transcript: APC.bAug05

Exon
Length: 114
Transcript: APC.bAug05

Exon
Length: 84
Transcript: APC.bAug05

Exon
Length: 105
Transcript: APC.bAug05

Exon
Length: 99
Transcript: APC.bAug05

Exon
Length: 379
Transcript: APC.bAug05

Exon
Length: 96
Transcript: APC.bAug05

Exon
Length: 140
Transcript: APC.bAug05

Exon
Length: 78
Transcript: APC.bAug05

Exon
Length: 117
Transcript: APC.bAug05

Exon
Length: 215
Transcript: APC.bAug05

Exon
Length: 8504
Transcript: APC.bAug05

Intron
Length: 427
Transcript: APC.bAug05

Intron
Length: 16412
Transcript: APC.bAug05

Intron
Length: 11300
Transcript: APC.bAug05

Intron
Length: 778
Transcript: APC.bAug05

Intron
Length: 8238
Transcript: APC.bAug05

Intron
Length: 5052
Transcript: APC.bAug05

Intron
Length: 11542
Transcript: APC.bAug05

Intron
Length: 8749
Transcript: APC.bAug05

Intron
Length: 14111
Transcript: APC.bAug05

Intron
Length: 3372
Transcript: APC.bAug05

Intron
Length: 2551
Transcript: APC.bAug05

Intron
Length: 5116
Transcript: APC.bAug05

Intron
Length: 681
Transcript: APC.bAug05

Intron
Length: 849
Transcript: APC.bAug05

Intron
Length: 5978
Transcript: APC.bAug05

Intron
Length: 2387
Transcript: APC.bAug05

Exon
Length: 67
Transcript: APC.cAug05

Exon
Length: 153
Transcript: APC.cAug05

Exon
Length: 85
Transcript: APC.cAug05

Exon
Length: 202
Transcript: APC.cAug05

Exon
Length: 109
Transcript: APC.cAug05

Exon
Length: 114
Transcript: APC.cAug05

Exon
Length: 84
Transcript: APC.cAug05

Exon
Length: 105
Transcript: APC.cAug05

Exon
Length: 186
Transcript: APC.cAug05

Exon
Length: 99
Transcript: APC.cAug05

Exon
Length: 379
Transcript: APC.cAug05

Exon
Length: 96
Transcript: APC.cAug05

Exon
Length: 140
Transcript: APC.cAug05

Exon
Length: 78
Transcript: APC.cAug05

Exon
Length: 117
Transcript: APC.cAug05

Exon
Length: 215
Transcript: APC.cAug05

Exon
Length: 5188
Transcript: APC.cAug05

Intron
Length: 16947
Transcript: APC.cAug05

Intron
Length: 11300
Transcript: APC.cAug05

Intron
Length: 778
Transcript: APC.cAug05

Intron
Length: 8238
Transcript: APC.cAug05

Intron
Length: 5052
Transcript: APC.cAug05

Intron
Length: 11542
Transcript: APC.cAug05

Intron
Length: 8749
Transcript: APC.cAug05

Intron
Length: 8742
Transcript: APC.cAug05

Intron
Length: 5183
Transcript: APC.cAug05

Intron
Length: 3372
Transcript: APC.cAug05

Intron
Length: 2551
Transcript: APC.cAug05

Intron
Length: 5116
Transcript: APC.cAug05

Intron
Length: 681
Transcript: APC.cAug05

Intron
Length: 849
Transcript: APC.cAug05

Intron
Length: 5978
Transcript: APC.cAug05

Intron
Length: 2387
Transcript: APC.cAug05

Exon
Length: 123
Transcript: APC.dAug05

Exon
Length: 76
Transcript: APC.dAug05

Exon
Length: 95
Transcript: APC.dAug05

Exon
Length: 1492
Transcript: APC.dAug05

Intron
Length: 1090
Transcript: APC.dAug05

Intron
Length: 1850
Transcript: APC.dAug05

Intron
Length: 27074
Transcript: APC.dAug05

Reaction
Expected peak: 135
Associated peak: 142,143,144,145,146,147
Repeated 51 time
Molarity: 5.44M
Forward: APC.F15
Reverse: APC.R4

Reaction
Expected peak: 220
Associated peak: 210,211,212,213,214
Repeated 51 time
Molarity: 3.75M
Forward: APC.F4
Reverse: APC.R4

Reaction
Expected peak: 232
Associated peak: 242,243,244,245,246,258,259,260
Repeated 51 time
Molarity: 8.82M
Forward: APC.F16
Reverse: APC.R14

Exon
Length: 43
Transcript: APC.eAug05

Exon
Length: 54
Transcript: APC.eAug05

Exon
Length: 140
Transcript: APC.eAug05

Exon
Length: 78
Transcript: APC.eAug05

Exon
Length: 117
Transcript: APC.eAug05

Exon
Length: 215
Transcript: APC.eAug05

Exon
Length: 120
Transcript: APC.eAug05

Intron
Length: 1315
Transcript: APC.eAug05

Intron
Length: 3747
Transcript: APC.eAug05

Intron
Length: 681
Transcript: APC.eAug05

Intron
Length: 849
Transcript: APC.eAug05

Intron
Length: 5978
Transcript: APC.eAug05

Intron
Length: 2387
Transcript: APC.eAug05

Exon
Length: 142
Transcript: APC.fAug05

Exon
Length: 76
Transcript: APC.fAug05

Exon
Length: 72
Transcript: APC.fAug05

Exon
Length: 112
Transcript: APC.fAug05

Exon
Length: 2638
Transcript: APC.fAug05

Intron
Length: 1090
Transcript: APC.fAug05

Intron
Length: 1873
Transcript: APC.fAug05

Intron
Length: 92
Transcript: APC.fAug05

Intron
Length: 2671
Transcript: APC.fAug05

Reaction
Expected peak: 299
Associated peak: 286,288,302,304,305,306,307,309
Repeated 51 time
Molarity: 26.32M
Forward: APC.F12
Reverse: APC.R11

Exon
Length: 222
Transcript: APC.gAug05

Exon
Length: 72
Transcript: APC.gAug05

Exon
Length: 112
Transcript: APC.gAug05

Exon
Length: 319
Transcript: APC.gAug05

Intron
Length: 1873
Transcript: APC.gAug05

Intron
Length: 92
Transcript: APC.gAug05

Intron
Length: 2671
Transcript: APC.gAug05

Reaction
Expected peak: 299
Associated peak: 286,288,302,304,305,306,307,309
Repeated 51 time
Molarity: 26.32M
Forward: APC.F12
Reverse: APC.R11

Exon
Length: 131
Transcript: APC.hAug05

Exon
Length: 76
Transcript: APC.hAug05

Exon
Length: 72
Transcript: APC.hAug05

Exon
Length: 112
Transcript: APC.hAug05

Exon
Length: 537
Transcript: APC.hAug05

Intron
Length: 1090
Transcript: APC.hAug05

Intron
Length: 1873
Transcript: APC.hAug05

Intron
Length: 92
Transcript: APC.hAug05

Intron
Length: 2639
Transcript: APC.hAug05

Reaction
Expected peak: 331
Associated peak: 307,309,343,344,346,347,348,349,350,351,352,353,355
Repeated 51 time
Molarity: 8.40M
Forward: APC.F12
Reverse: APC.R11

Exon
Length: 60
Transcript: APC.iAug05

Exon
Length: 153
Transcript: APC.iAug05

Exon
Length: 85
Transcript: APC.iAug05

Exon
Length: 191
Transcript: APC.iAug05

Intron
Length: 46990
Transcript: APC.iAug05

Intron
Length: 11300
Transcript: APC.iAug05

Intron
Length: 778
Transcript: APC.iAug05

Exon
Length: 108
Transcript: APC.jAug05

Exon
Length: 72
Transcript: APC.jAug05

Exon
Length: 112
Transcript: APC.jAug05

Exon
Length: 368
Transcript: APC.jAug05

Intron
Length: 3039
Transcript: APC.jAug05

Intron
Length: 92
Transcript: APC.jAug05

Intron
Length: 2671
Transcript: APC.jAug05

Reaction
Expected peak: 299
Associated peak: 286,288,302,304,305,306,307,309
Repeated 51 time
Molarity: 26.32M
Forward: APC.F12
Reverse: APC.R11

Exon
Length: 290
Transcript: APC.kAug05

Exon
Length: 85
Transcript: APC.kAug05

Exon
Length: 202
Transcript: APC.kAug05

Exon
Length: 25
Transcript: APC.kAug05

Intron
Length: 58443
Transcript: APC.kAug05

Intron
Length: 778
Transcript: APC.kAug05

Intron
Length: 8238
Transcript: APC.kAug05

Exon
Length: 86
Transcript: APC.lAug05

Exon
Length: 76
Transcript: APC.lAug05

Exon
Length: 72
Transcript: APC.lAug05

Exon
Length: 1096
Transcript: APC.lAug05

Intron
Length: 1090
Transcript: APC.lAug05

Intron
Length: 1873
Transcript: APC.lAug05

Intron
Length: 92
Transcript: APC.lAug05

Exon
Length: 123
Transcript: APC.mAug05

Exon
Length: 72
Transcript: APC.mAug05

Exon
Length: 112
Transcript: APC.mAug05

Exon
Length: 110
Transcript: APC.mAug05

Intron
Length: 536
Transcript: APC.mAug05

Intron
Length: 92
Transcript: APC.mAug05

Intron
Length: 2671
Transcript: APC.mAug05

Reaction
Expected peak: 299
Associated peak: 286,288,302,304,305,306,307,309
Repeated 51 time
Molarity: 26.32M
Forward: APC.F12
Reverse: APC.R11

Exon
Length: 142
Transcript: APC.nAug05

Exon
Length: 76
Transcript: APC.nAug05

Exon
Length: 508
Transcript: APC.nAug05

Intron
Length: 1090
Transcript: APC.nAug05

Intron
Length: 1873
Transcript: APC.nAug05

Exon
Length: 35
Transcript: APC.oAug05

Exon
Length: 78
Transcript: APC.oAug05

Exon
Length: 117
Transcript: APC.oAug05

Exon
Length: 25
Transcript: APC.oAug05

Exon
Length: 76
Transcript: APC.oAug05

Exon
Length: 72
Transcript: APC.oAug05

Exon
Length: 112
Transcript: APC.oAug05

Exon
Length: 179
Transcript: APC.oAug05

Intron
Length: 681
Transcript: APC.oAug05

Intron
Length: 849
Transcript: APC.oAug05

Intron
Length: 27676
Transcript: APC.oAug05

Intron
Length: 5834
Transcript: APC.oAug05

Intron
Length: 1873
Transcript: APC.oAug05

Intron
Length: 92
Transcript: APC.oAug05

Intron
Length: 2671
Transcript: APC.oAug05

Reaction
Expected peak: 299
Associated peak: 286,288,302,304,305,306,307,309
Repeated 51 time
Molarity: 26.32M
Forward: APC.F12
Reverse: APC.R11

Exon
Length: 35
Transcript: APC.pAug05

Exon
Length: 78
Transcript: APC.pAug05

Exon
Length: 1088
Transcript: APC.pAug05

Intron
Length: 681
Transcript: APC.pAug05

Intron
Length: 849
Transcript: APC.pAug05

Exon
Length: 167
Transcript: APC.qAug05

Exon
Length: 72
Transcript: APC.qAug05

Exon
Length: 112
Transcript: APC.qAug05

Exon
Length: 312
Transcript: APC.qAug05

Intron
Length: 1873
Transcript: APC.qAug05

Intron
Length: 92
Transcript: APC.qAug05

Intron
Length: 26870
Transcript: APC.qAug05

Reaction
Expected peak: 247
Associated peak: 256,257,258,259,260,261
Repeated 51 time
Molarity: 2.60M
Forward: APC.F15
Reverse: APC.R4

Reaction
Expected peak: 309
Associated peak: 316,317,318,320,321,322,323
Repeated 51 time
Molarity: 1.68M
Forward: APC.F4
Reverse: APC.R4

Reaction
Expected peak: 344
Associated peak: 357,359,360,361,362,363,364,365,386,391
Repeated 51 time
Molarity: 3.32M
Forward: APC.F16
Reverse: APC.R14

Exon
Length: 895
Transcript: APC.shed1.aAug05

Exon
Length: 538
Transcript: APC.shed2.aAug05

Exon
Length: 732
Transcript: APC.shed3.aAug05

Exon
Length: 488
Transcript: APC.shed4.aAug05

APC.F16
TCCTACAGCTACAGAGATTCAAGATG

APC.F15
TGTTCAGCAGTTGGACTTAACG

APC.F12
CGTGATGTCCAATACAGAGGC

APC.F4
GAAGGCGAATCCCCATAAGT

APC.R11
GCTTCTGTTTCCCTCCGATAC

APC.R4
TTGTGGCTTGGTTTCTCTGG

APC.R14
TCTCTCAGTCGAGCAAGTTCC

Gene primer pair list : Primer pairs

Forward	Reverse	Occurences	View
APC.F12	APC.R11	51	View
APC.F15	APC.R4	51	View
APC.F16	APC.R14	51	View
APC.F4	APC.R4	51	View

current - show all

Page 1 of 1, records 1 to 4 of 4