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LGFUS Public Data
Identification of alternative splicing markers for breast cancer
2. Breast Validation Screen
Transcript map
: HMGA1
Exon
Length: 92
Transcript: HMGA1.aAug05
Length: 92
Transcript: HMGA1.aAug05
Exon
Length: 84
Transcript: HMGA1.aAug05
Length: 84
Transcript: HMGA1.aAug05
Exon
Length: 51
Transcript: HMGA1.aAug05
Length: 51
Transcript: HMGA1.aAug05
Exon
Length: 97
Transcript: HMGA1.aAug05
Length: 97
Transcript: HMGA1.aAug05
Exon
Length: 883
Transcript: HMGA1.aAug05
Length: 883
Transcript: HMGA1.aAug05
Exon
Length: 408
Transcript: HMGA1.aAug05
Length: 408
Transcript: HMGA1.aAug05
Intron
Length: 1796
Transcript: HMGA1.aAug05
Length: 1796
Transcript: HMGA1.aAug05
Intron
Length: 672
Transcript: HMGA1.aAug05
Length: 672
Transcript: HMGA1.aAug05
Intron
Length: 97
Transcript: HMGA1.aAug05
Length: 97
Transcript: HMGA1.aAug05
Intron
Length: 1118
Transcript: HMGA1.aAug05
Length: 1118
Transcript: HMGA1.aAug05
Intron
Length: 110
Transcript: HMGA1.aAug05
Length: 110
Transcript: HMGA1.aAug05
Exon
Length: 90
Transcript: HMGA1.bAug05
Length: 90
Transcript: HMGA1.bAug05
Exon
Length: 114
Transcript: HMGA1.bAug05
Length: 114
Transcript: HMGA1.bAug05
Exon
Length: 179
Transcript: HMGA1.bAug05
Length: 179
Transcript: HMGA1.bAug05
Exon
Length: 81
Transcript: HMGA1.bAug05
Length: 81
Transcript: HMGA1.bAug05
Exon
Length: 51
Transcript: HMGA1.bAug05
Length: 51
Transcript: HMGA1.bAug05
Exon
Length: 97
Transcript: HMGA1.bAug05
Length: 97
Transcript: HMGA1.bAug05
Intron
Length: 240
Transcript: HMGA1.bAug05
Length: 240
Transcript: HMGA1.bAug05
Intron
Length: 3419
Transcript: HMGA1.bAug05
Length: 3419
Transcript: HMGA1.bAug05
Intron
Length: 1799
Transcript: HMGA1.bAug05
Length: 1799
Transcript: HMGA1.bAug05
Intron
Length: 672
Transcript: HMGA1.bAug05
Length: 672
Transcript: HMGA1.bAug05
Intron
Length: 97
Transcript: HMGA1.bAug05
Length: 97
Transcript: HMGA1.bAug05
Reaction
Expected peak: 307
Associated peak: 307,309,310,311,312
Repeated 51 time
Molarity: 3.13M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Expected peak: 307
Associated peak: 307,309,310,311,312
Repeated 51 time
Molarity: 3.13M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Exon
Length: 403
Transcript: HMGA1.cAug05
Length: 403
Transcript: HMGA1.cAug05
Exon
Length: 179
Transcript: HMGA1.cAug05
Length: 179
Transcript: HMGA1.cAug05
Exon
Length: 84
Transcript: HMGA1.cAug05
Length: 84
Transcript: HMGA1.cAug05
Exon
Length: 51
Transcript: HMGA1.cAug05
Length: 51
Transcript: HMGA1.cAug05
Exon
Length: 1401
Transcript: HMGA1.cAug05
Length: 1401
Transcript: HMGA1.cAug05
Intron
Length: 3419
Transcript: HMGA1.cAug05
Length: 3419
Transcript: HMGA1.cAug05
Intron
Length: 1796
Transcript: HMGA1.cAug05
Length: 1796
Transcript: HMGA1.cAug05
Intron
Length: 672
Transcript: HMGA1.cAug05
Length: 672
Transcript: HMGA1.cAug05
Intron
Length: 1312
Transcript: HMGA1.cAug05
Length: 1312
Transcript: HMGA1.cAug05
Reaction
Expected peak: 337
Associated peak: 322,323,325,326,351,352,353,354,355,356,357,358,359,360,361,370,373
Repeated 51 time
Molarity: 18.96M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 337
Associated peak: 322,323,325,326,351,352,353,354,355,356,357,358,359,360,361,370,373
Repeated 51 time
Molarity: 18.96M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Exon
Length: 402
Transcript: HMGA1.dAug05
Length: 402
Transcript: HMGA1.dAug05
Exon
Length: 179
Transcript: HMGA1.dAug05
Length: 179
Transcript: HMGA1.dAug05
Exon
Length: 81
Transcript: HMGA1.dAug05
Length: 81
Transcript: HMGA1.dAug05
Exon
Length: 51
Transcript: HMGA1.dAug05
Length: 51
Transcript: HMGA1.dAug05
Exon
Length: 882
Transcript: HMGA1.dAug05
Length: 882
Transcript: HMGA1.dAug05
Intron
Length: 3419
Transcript: HMGA1.dAug05
Length: 3419
Transcript: HMGA1.dAug05
Intron
Length: 1799
Transcript: HMGA1.dAug05
Length: 1799
Transcript: HMGA1.dAug05
Intron
Length: 672
Transcript: HMGA1.dAug05
Length: 672
Transcript: HMGA1.dAug05
Intron
Length: 1312
Transcript: HMGA1.dAug05
Length: 1312
Transcript: HMGA1.dAug05
Reaction
Expected peak: 334
Associated peak: 310,313,322,323,325,326,351,352,353,354,355,356,357,358,359,360,361,370,373
Repeated 51 time
Molarity: 21.33M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 334
Associated peak: 310,313,322,323,325,326,351,352,353,354,355,356,357,358,359,360,361,370,373
Repeated 51 time
Molarity: 21.33M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Exon
Length: 57
Transcript: HMGA1.eAug05
Length: 57
Transcript: HMGA1.eAug05
Exon
Length: 114
Transcript: HMGA1.eAug05
Length: 114
Transcript: HMGA1.eAug05
Exon
Length: 179
Transcript: HMGA1.eAug05
Length: 179
Transcript: HMGA1.eAug05
Exon
Length: 84
Transcript: HMGA1.eAug05
Length: 84
Transcript: HMGA1.eAug05
Exon
Length: 51
Transcript: HMGA1.eAug05
Length: 51
Transcript: HMGA1.eAug05
Exon
Length: 426
Transcript: HMGA1.eAug05
Length: 426
Transcript: HMGA1.eAug05
Intron
Length: 242
Transcript: HMGA1.eAug05
Length: 242
Transcript: HMGA1.eAug05
Intron
Length: 3419
Transcript: HMGA1.eAug05
Length: 3419
Transcript: HMGA1.eAug05
Intron
Length: 1796
Transcript: HMGA1.eAug05
Length: 1796
Transcript: HMGA1.eAug05
Intron
Length: 672
Transcript: HMGA1.eAug05
Length: 672
Transcript: HMGA1.eAug05
Intron
Length: 1312
Transcript: HMGA1.eAug05
Length: 1312
Transcript: HMGA1.eAug05
Reaction
Expected peak: 305
Associated peak: 307,309,310,311,312
Repeated 51 time
Molarity: 3.13M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Expected peak: 305
Associated peak: 307,309,310,311,312
Repeated 51 time
Molarity: 3.13M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Reaction
Expected peak: 337
Associated peak: 322,323,325,326,351,352,353,354,355,356,357,358,359,360,361,370,373
Repeated 51 time
Molarity: 18.96M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 337
Associated peak: 322,323,325,326,351,352,353,354,355,356,357,358,359,360,361,370,373
Repeated 51 time
Molarity: 18.96M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Exon
Length: 130
Transcript: HMGA1.fAug05
Length: 130
Transcript: HMGA1.fAug05
Exon
Length: 114
Transcript: HMGA1.fAug05
Length: 114
Transcript: HMGA1.fAug05
Exon
Length: 179
Transcript: HMGA1.fAug05
Length: 179
Transcript: HMGA1.fAug05
Exon
Length: 84
Transcript: HMGA1.fAug05
Length: 84
Transcript: HMGA1.fAug05
Exon
Length: 51
Transcript: HMGA1.fAug05
Length: 51
Transcript: HMGA1.fAug05
Exon
Length: 1400
Transcript: HMGA1.fAug05
Length: 1400
Transcript: HMGA1.fAug05
Intron
Length: 240
Transcript: HMGA1.fAug05
Length: 240
Transcript: HMGA1.fAug05
Intron
Length: 3419
Transcript: HMGA1.fAug05
Length: 3419
Transcript: HMGA1.fAug05
Intron
Length: 1796
Transcript: HMGA1.fAug05
Length: 1796
Transcript: HMGA1.fAug05
Intron
Length: 672
Transcript: HMGA1.fAug05
Length: 672
Transcript: HMGA1.fAug05
Intron
Length: 1312
Transcript: HMGA1.fAug05
Length: 1312
Transcript: HMGA1.fAug05
Reaction
Expected peak: 307
Associated peak: 307,309,310,311,312
Repeated 51 time
Molarity: 3.13M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Expected peak: 307
Associated peak: 307,309,310,311,312
Repeated 51 time
Molarity: 3.13M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Reaction
Expected peak: 337
Associated peak: 322,323,325,326,351,352,353,354,355,356,357,358,359,360,361,370,373
Repeated 51 time
Molarity: 18.96M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 337
Associated peak: 322,323,325,326,351,352,353,354,355,356,357,358,359,360,361,370,373
Repeated 51 time
Molarity: 18.96M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Exon
Length: 75
Transcript: HMGA1.gAug05
Length: 75
Transcript: HMGA1.gAug05
Exon
Length: 114
Transcript: HMGA1.gAug05
Length: 114
Transcript: HMGA1.gAug05
Exon
Length: 179
Transcript: HMGA1.gAug05
Length: 179
Transcript: HMGA1.gAug05
Exon
Length: 81
Transcript: HMGA1.gAug05
Length: 81
Transcript: HMGA1.gAug05
Exon
Length: 51
Transcript: HMGA1.gAug05
Length: 51
Transcript: HMGA1.gAug05
Exon
Length: 229
Transcript: HMGA1.gAug05
Length: 229
Transcript: HMGA1.gAug05
Intron
Length: 240
Transcript: HMGA1.gAug05
Length: 240
Transcript: HMGA1.gAug05
Intron
Length: 3419
Transcript: HMGA1.gAug05
Length: 3419
Transcript: HMGA1.gAug05
Intron
Length: 1799
Transcript: HMGA1.gAug05
Length: 1799
Transcript: HMGA1.gAug05
Intron
Length: 672
Transcript: HMGA1.gAug05
Length: 672
Transcript: HMGA1.gAug05
Intron
Length: 1312
Transcript: HMGA1.gAug05
Length: 1312
Transcript: HMGA1.gAug05
Reaction
Expected peak: 307
Associated peak: 307,309,310,311,312
Repeated 51 time
Molarity: 3.13M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Expected peak: 307
Associated peak: 307,309,310,311,312
Repeated 51 time
Molarity: 3.13M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Reaction
Expected peak: 334
Associated peak: 310,313,322,323,325,326,351,352,353,354,355,356,357,358,359,360,361,370,373
Repeated 51 time
Molarity: 21.33M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 334
Associated peak: 310,313,322,323,325,326,351,352,353,354,355,356,357,358,359,360,361,370,373
Repeated 51 time
Molarity: 21.33M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Exon
Length: 416
Transcript: HMGA1.hAug05
Length: 416
Transcript: HMGA1.hAug05
Exon
Length: 146
Transcript: HMGA1.hAug05
Length: 146
Transcript: HMGA1.hAug05
Exon
Length: 84
Transcript: HMGA1.hAug05
Length: 84
Transcript: HMGA1.hAug05
Exon
Length: 51
Transcript: HMGA1.hAug05
Length: 51
Transcript: HMGA1.hAug05
Exon
Length: 1401
Transcript: HMGA1.hAug05
Length: 1401
Transcript: HMGA1.hAug05
Intron
Length: 3419
Transcript: HMGA1.hAug05
Length: 3419
Transcript: HMGA1.hAug05
Intron
Length: 1829
Transcript: HMGA1.hAug05
Length: 1829
Transcript: HMGA1.hAug05
Intron
Length: 672
Transcript: HMGA1.hAug05
Length: 672
Transcript: HMGA1.hAug05
Intron
Length: 1312
Transcript: HMGA1.hAug05
Length: 1312
Transcript: HMGA1.hAug05
Reaction
Expected peak: 304
Associated peak: 300,302,304,305,307,309,310,313
Repeated 51 time
Molarity: 26.35M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 304
Associated peak: 300,302,304,305,307,309,310,313
Repeated 51 time
Molarity: 26.35M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Exon
Length: 91
Transcript: HMGA1.iAug05
Length: 91
Transcript: HMGA1.iAug05
Exon
Length: 114
Transcript: HMGA1.iAug05
Length: 114
Transcript: HMGA1.iAug05
Exon
Length: 146
Transcript: HMGA1.iAug05
Length: 146
Transcript: HMGA1.iAug05
Exon
Length: 84
Transcript: HMGA1.iAug05
Length: 84
Transcript: HMGA1.iAug05
Exon
Length: 51
Transcript: HMGA1.iAug05
Length: 51
Transcript: HMGA1.iAug05
Exon
Length: 1407
Transcript: HMGA1.iAug05
Length: 1407
Transcript: HMGA1.iAug05
Intron
Length: 240
Transcript: HMGA1.iAug05
Length: 240
Transcript: HMGA1.iAug05
Intron
Length: 3419
Transcript: HMGA1.iAug05
Length: 3419
Transcript: HMGA1.iAug05
Intron
Length: 1829
Transcript: HMGA1.iAug05
Length: 1829
Transcript: HMGA1.iAug05
Intron
Length: 672
Transcript: HMGA1.iAug05
Length: 672
Transcript: HMGA1.iAug05
Intron
Length: 1312
Transcript: HMGA1.iAug05
Length: 1312
Transcript: HMGA1.iAug05
Reaction
Expected peak: 304
Associated peak: 300,302,304,305,307,309,310,313
Repeated 51 time
Molarity: 26.35M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 304
Associated peak: 300,302,304,305,307,309,310,313
Repeated 51 time
Molarity: 26.35M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Reaction
Expected peak: 307
Associated peak: 307,309,310,311,312
Repeated 51 time
Molarity: 3.13M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Expected peak: 307
Associated peak: 307,309,310,311,312
Repeated 51 time
Molarity: 3.13M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Exon
Length: 88
Transcript: HMGA1.jAug05
Length: 88
Transcript: HMGA1.jAug05
Exon
Length: 114
Transcript: HMGA1.jAug05
Length: 114
Transcript: HMGA1.jAug05
Exon
Length: 146
Transcript: HMGA1.jAug05
Length: 146
Transcript: HMGA1.jAug05
Exon
Length: 84
Transcript: HMGA1.jAug05
Length: 84
Transcript: HMGA1.jAug05
Exon
Length: 51
Transcript: HMGA1.jAug05
Length: 51
Transcript: HMGA1.jAug05
Exon
Length: 124
Transcript: HMGA1.jAug05
Length: 124
Transcript: HMGA1.jAug05
Exon
Length: 40
Transcript: HMGA1.jAug05
Length: 40
Transcript: HMGA1.jAug05
Intron
Length: 240
Transcript: HMGA1.jAug05
Length: 240
Transcript: HMGA1.jAug05
Intron
Length: 3419
Transcript: HMGA1.jAug05
Length: 3419
Transcript: HMGA1.jAug05
Intron
Length: 1829
Transcript: HMGA1.jAug05
Length: 1829
Transcript: HMGA1.jAug05
Intron
Length: 672
Transcript: HMGA1.jAug05
Length: 672
Transcript: HMGA1.jAug05
Intron
Length: 1312
Transcript: HMGA1.jAug05
Length: 1312
Transcript: HMGA1.jAug05
Intron
Length: 612
Transcript: HMGA1.jAug05
Length: 612
Transcript: HMGA1.jAug05
Reaction
Expected peak: 304
Associated peak: 300,302,304,305,307,309,310,313
Repeated 51 time
Molarity: 26.35M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 304
Associated peak: 300,302,304,305,307,309,310,313
Repeated 51 time
Molarity: 26.35M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Reaction
Expected peak: 307
Associated peak: 307,309,310,311,312
Repeated 51 time
Molarity: 3.13M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Expected peak: 307
Associated peak: 307,309,310,311,312
Repeated 51 time
Molarity: 3.13M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Exon
Length: 45
Transcript: HMGA1.kAug05
Length: 45
Transcript: HMGA1.kAug05
Exon
Length: 114
Transcript: HMGA1.kAug05
Length: 114
Transcript: HMGA1.kAug05
Exon
Length: 179
Transcript: HMGA1.kAug05
Length: 179
Transcript: HMGA1.kAug05
Exon
Length: 84
Transcript: HMGA1.kAug05
Length: 84
Transcript: HMGA1.kAug05
Exon
Length: 51
Transcript: HMGA1.kAug05
Length: 51
Transcript: HMGA1.kAug05
Exon
Length: 124
Transcript: HMGA1.kAug05
Length: 124
Transcript: HMGA1.kAug05
Intron
Length: 220
Transcript: HMGA1.kAug05
Length: 220
Transcript: HMGA1.kAug05
Intron
Length: 3419
Transcript: HMGA1.kAug05
Length: 3419
Transcript: HMGA1.kAug05
Intron
Length: 1796
Transcript: HMGA1.kAug05
Length: 1796
Transcript: HMGA1.kAug05
Intron
Length: 672
Transcript: HMGA1.kAug05
Length: 672
Transcript: HMGA1.kAug05
Intron
Length: 1312
Transcript: HMGA1.kAug05
Length: 1312
Transcript: HMGA1.kAug05
Reaction
Expected peak: 337
Associated peak: 322,323,325,326,351,352,353,354,355,356,357,358,359,360,361,370,373
Repeated 51 time
Molarity: 18.96M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 337
Associated peak: 322,323,325,326,351,352,353,354,355,356,357,358,359,360,361,370,373
Repeated 51 time
Molarity: 18.96M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Exon
Length: 48
Transcript: HMGA1.lAug05
Length: 48
Transcript: HMGA1.lAug05
Exon
Length: 114
Transcript: HMGA1.lAug05
Length: 114
Transcript: HMGA1.lAug05
Exon
Length: 146
Transcript: HMGA1.lAug05
Length: 146
Transcript: HMGA1.lAug05
Exon
Length: 81
Transcript: HMGA1.lAug05
Length: 81
Transcript: HMGA1.lAug05
Exon
Length: 51
Transcript: HMGA1.lAug05
Length: 51
Transcript: HMGA1.lAug05
Exon
Length: 1400
Transcript: HMGA1.lAug05
Length: 1400
Transcript: HMGA1.lAug05
Intron
Length: 240
Transcript: HMGA1.lAug05
Length: 240
Transcript: HMGA1.lAug05
Intron
Length: 3419
Transcript: HMGA1.lAug05
Length: 3419
Transcript: HMGA1.lAug05
Intron
Length: 1832
Transcript: HMGA1.lAug05
Length: 1832
Transcript: HMGA1.lAug05
Intron
Length: 672
Transcript: HMGA1.lAug05
Length: 672
Transcript: HMGA1.lAug05
Intron
Length: 1312
Transcript: HMGA1.lAug05
Length: 1312
Transcript: HMGA1.lAug05
Reaction
Expected peak: 301
Associated peak: 300,302,304,305,307,309,310,313
Repeated 51 time
Molarity: 26.35M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 301
Associated peak: 300,302,304,305,307,309,310,313
Repeated 51 time
Molarity: 26.35M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Reaction
Expected peak: 307
Associated peak: 307,309,310,311,312
Repeated 51 time
Molarity: 3.13M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Expected peak: 307
Associated peak: 307,309,310,311,312
Repeated 51 time
Molarity: 3.13M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Exon
Length: 92
Transcript: HMGA1.mAug05
Length: 92
Transcript: HMGA1.mAug05
Exon
Length: 114
Transcript: HMGA1.mAug05
Length: 114
Transcript: HMGA1.mAug05
Exon
Length: 179
Transcript: HMGA1.mAug05
Length: 179
Transcript: HMGA1.mAug05
Exon
Length: 69
Transcript: HMGA1.mAug05
Length: 69
Transcript: HMGA1.mAug05
Exon
Length: 202
Transcript: HMGA1.mAug05
Length: 202
Transcript: HMGA1.mAug05
Intron
Length: 240
Transcript: HMGA1.mAug05
Length: 240
Transcript: HMGA1.mAug05
Intron
Length: 3419
Transcript: HMGA1.mAug05
Length: 3419
Transcript: HMGA1.mAug05
Intron
Length: 1796
Transcript: HMGA1.mAug05
Length: 1796
Transcript: HMGA1.mAug05
Intron
Length: 2050
Transcript: HMGA1.mAug05
Length: 2050
Transcript: HMGA1.mAug05
Reaction
Expected peak: 271
Associated peak: 291,292,293,294,300,302,304,305
Repeated 51 time
Molarity: 13.74M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 271
Associated peak: 291,292,293,294,300,302,304,305
Repeated 51 time
Molarity: 13.74M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Reaction
Expected peak: 307
Associated peak: 307,309,310,311,312
Repeated 51 time
Molarity: 3.13M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Expected peak: 307
Associated peak: 307,309,310,311,312
Repeated 51 time
Molarity: 3.13M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Exon
Length: 165
Transcript: HMGA1.nAug05
Length: 165
Transcript: HMGA1.nAug05
Exon
Length: 179
Transcript: HMGA1.nAug05
Length: 179
Transcript: HMGA1.nAug05
Exon
Length: 69
Transcript: HMGA1.nAug05
Length: 69
Transcript: HMGA1.nAug05
Exon
Length: 440
Transcript: HMGA1.nAug05
Length: 440
Transcript: HMGA1.nAug05
Intron
Length: 3419
Transcript: HMGA1.nAug05
Length: 3419
Transcript: HMGA1.nAug05
Intron
Length: 1796
Transcript: HMGA1.nAug05
Length: 1796
Transcript: HMGA1.nAug05
Intron
Length: 2050
Transcript: HMGA1.nAug05
Length: 2050
Transcript: HMGA1.nAug05
Reaction
Expected peak: 271
Associated peak: 291,292,293,294,300,302,304,305
Repeated 51 time
Molarity: 13.74M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 271
Associated peak: 291,292,293,294,300,302,304,305
Repeated 51 time
Molarity: 13.74M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Exon
Length: 51
Transcript: HMGA1.oAug05
Length: 51
Transcript: HMGA1.oAug05
Exon
Length: 114
Transcript: HMGA1.oAug05
Length: 114
Transcript: HMGA1.oAug05
Exon
Length: 179
Transcript: HMGA1.oAug05
Length: 179
Transcript: HMGA1.oAug05
Exon
Length: 66
Transcript: HMGA1.oAug05
Length: 66
Transcript: HMGA1.oAug05
Exon
Length: 452
Transcript: HMGA1.oAug05
Length: 452
Transcript: HMGA1.oAug05
Intron
Length: 240
Transcript: HMGA1.oAug05
Length: 240
Transcript: HMGA1.oAug05
Intron
Length: 3419
Transcript: HMGA1.oAug05
Length: 3419
Transcript: HMGA1.oAug05
Intron
Length: 1799
Transcript: HMGA1.oAug05
Length: 1799
Transcript: HMGA1.oAug05
Intron
Length: 2050
Transcript: HMGA1.oAug05
Length: 2050
Transcript: HMGA1.oAug05
Reaction
Expected peak: 268
Associated peak: 291,292,293,294,300,302
Repeated 51 time
Molarity: 6.23M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 268
Associated peak: 291,292,293,294,300,302
Repeated 51 time
Molarity: 6.23M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Reaction
Expected peak: 307
Associated peak: 307,309,310,311,312
Repeated 51 time
Molarity: 3.13M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Expected peak: 307
Associated peak: 307,309,310,311,312
Repeated 51 time
Molarity: 3.13M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Exon
Length: 103
Transcript: HMGA1.pAug05
Length: 103
Transcript: HMGA1.pAug05
Exon
Length: 146
Transcript: HMGA1.pAug05
Length: 146
Transcript: HMGA1.pAug05
Exon
Length: 84
Transcript: HMGA1.pAug05
Length: 84
Transcript: HMGA1.pAug05
Exon
Length: 51
Transcript: HMGA1.pAug05
Length: 51
Transcript: HMGA1.pAug05
Exon
Length: 202
Transcript: HMGA1.pAug05
Length: 202
Transcript: HMGA1.pAug05
Intron
Length: 3021
Transcript: HMGA1.pAug05
Length: 3021
Transcript: HMGA1.pAug05
Intron
Length: 1829
Transcript: HMGA1.pAug05
Length: 1829
Transcript: HMGA1.pAug05
Intron
Length: 672
Transcript: HMGA1.pAug05
Length: 672
Transcript: HMGA1.pAug05
Intron
Length: 1312
Transcript: HMGA1.pAug05
Length: 1312
Transcript: HMGA1.pAug05
Reaction
Expected peak: 304
Associated peak: 300,302,304,305,307,309,310,313
Repeated 51 time
Molarity: 26.35M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 304
Associated peak: 300,302,304,305,307,309,310,313
Repeated 51 time
Molarity: 26.35M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Exon
Length: 50
Transcript: HMGA1.qAug05
Length: 50
Transcript: HMGA1.qAug05
Exon
Length: 114
Transcript: HMGA1.qAug05
Length: 114
Transcript: HMGA1.qAug05
Exon
Length: 146
Transcript: HMGA1.qAug05
Length: 146
Transcript: HMGA1.qAug05
Exon
Length: 69
Transcript: HMGA1.qAug05
Length: 69
Transcript: HMGA1.qAug05
Exon
Length: 511
Transcript: HMGA1.qAug05
Length: 511
Transcript: HMGA1.qAug05
Intron
Length: 240
Transcript: HMGA1.qAug05
Length: 240
Transcript: HMGA1.qAug05
Intron
Length: 3419
Transcript: HMGA1.qAug05
Length: 3419
Transcript: HMGA1.qAug05
Intron
Length: 1829
Transcript: HMGA1.qAug05
Length: 1829
Transcript: HMGA1.qAug05
Intron
Length: 2050
Transcript: HMGA1.qAug05
Length: 2050
Transcript: HMGA1.qAug05
Reaction
Expected peak: 238
Associated peak: None
Repeated 51 time
Molarity: 0.00M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 238
Associated peak: None
Repeated 51 time
Molarity: 0.00M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Reaction
Expected peak: 307
Associated peak: 307,309,310,311,312
Repeated 51 time
Molarity: 3.13M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Expected peak: 307
Associated peak: 307,309,310,311,312
Repeated 51 time
Molarity: 3.13M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Exon
Length: 131
Transcript: HMGA1.rAug05
Length: 131
Transcript: HMGA1.rAug05
Exon
Length: 179
Transcript: HMGA1.rAug05
Length: 179
Transcript: HMGA1.rAug05
Exon
Length: 66
Transcript: HMGA1.rAug05
Length: 66
Transcript: HMGA1.rAug05
Exon
Length: 193
Transcript: HMGA1.rAug05
Length: 193
Transcript: HMGA1.rAug05
Intron
Length: 3419
Transcript: HMGA1.rAug05
Length: 3419
Transcript: HMGA1.rAug05
Intron
Length: 1799
Transcript: HMGA1.rAug05
Length: 1799
Transcript: HMGA1.rAug05
Intron
Length: 2050
Transcript: HMGA1.rAug05
Length: 2050
Transcript: HMGA1.rAug05
Reaction
Expected peak: 268
Associated peak: 291,292,293,294,300,302
Repeated 51 time
Molarity: 6.23M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 268
Associated peak: 291,292,293,294,300,302
Repeated 51 time
Molarity: 6.23M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Exon
Length: 56
Transcript: HMGA1.sAug05
Length: 56
Transcript: HMGA1.sAug05
Exon
Length: 114
Transcript: HMGA1.sAug05
Length: 114
Transcript: HMGA1.sAug05
Exon
Length: 146
Transcript: HMGA1.sAug05
Length: 146
Transcript: HMGA1.sAug05
Exon
Length: 84
Transcript: HMGA1.sAug05
Length: 84
Transcript: HMGA1.sAug05
Exon
Length: 21
Transcript: HMGA1.sAug05
Length: 21
Transcript: HMGA1.sAug05
Intron
Length: 242
Transcript: HMGA1.sAug05
Length: 242
Transcript: HMGA1.sAug05
Intron
Length: 3419
Transcript: HMGA1.sAug05
Length: 3419
Transcript: HMGA1.sAug05
Intron
Length: 1829
Transcript: HMGA1.sAug05
Length: 1829
Transcript: HMGA1.sAug05
Intron
Length: 672
Transcript: HMGA1.sAug05
Length: 672
Transcript: HMGA1.sAug05
Reaction
Expected peak: 305
Associated peak: 307,309,310,311,312
Repeated 51 time
Molarity: 3.13M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Expected peak: 305
Associated peak: 307,309,310,311,312
Repeated 51 time
Molarity: 3.13M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Exon
Length: 739
Transcript: HMGA1.shed1.aAug05
Length: 739
Transcript: HMGA1.shed1.aAug05
Exon
Length: 767
Transcript: HMGA1.shed2.aAug05
Length: 767
Transcript: HMGA1.shed2.aAug05
Exon
Length: 665
Transcript: HMGA1.shed3.aAug05
Length: 665
Transcript: HMGA1.shed3.aAug05
Exon
Length: 115
Transcript: HMGA1.tAug05
Length: 115
Transcript: HMGA1.tAug05
Exon
Length: 179
Transcript: HMGA1.tAug05
Length: 179
Transcript: HMGA1.tAug05
Exon
Length: 84
Transcript: HMGA1.tAug05
Length: 84
Transcript: HMGA1.tAug05
Exon
Length: 51
Transcript: HMGA1.tAug05
Length: 51
Transcript: HMGA1.tAug05
Exon
Length: 1400
Transcript: HMGA1.tAug05
Length: 1400
Transcript: HMGA1.tAug05
Intron
Length: 3773
Transcript: HMGA1.tAug05
Length: 3773
Transcript: HMGA1.tAug05
Intron
Length: 1796
Transcript: HMGA1.tAug05
Length: 1796
Transcript: HMGA1.tAug05
Intron
Length: 672
Transcript: HMGA1.tAug05
Length: 672
Transcript: HMGA1.tAug05
Intron
Length: 1312
Transcript: HMGA1.tAug05
Length: 1312
Transcript: HMGA1.tAug05
Reaction
Expected peak: 193
Associated peak: 203,204,205,206
Repeated 51 time
Molarity: 3.73M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Expected peak: 193
Associated peak: 203,204,205,206
Repeated 51 time
Molarity: 3.73M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Reaction
Expected peak: 337
Associated peak: 322,323,325,326,351,352,353,354,355,356,357,358,359,360,361,370,373
Repeated 51 time
Molarity: 18.96M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 337
Associated peak: 322,323,325,326,351,352,353,354,355,356,357,358,359,360,361,370,373
Repeated 51 time
Molarity: 18.96M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Exon
Length: 91
Transcript: HMGA1.uAug05
Length: 91
Transcript: HMGA1.uAug05
Exon
Length: 179
Transcript: HMGA1.uAug05
Length: 179
Transcript: HMGA1.uAug05
Exon
Length: 81
Transcript: HMGA1.uAug05
Length: 81
Transcript: HMGA1.uAug05
Exon
Length: 51
Transcript: HMGA1.uAug05
Length: 51
Transcript: HMGA1.uAug05
Exon
Length: 769
Transcript: HMGA1.uAug05
Length: 769
Transcript: HMGA1.uAug05
Exon
Length: 592
Transcript: HMGA1.uAug05
Length: 592
Transcript: HMGA1.uAug05
Intron
Length: 3773
Transcript: HMGA1.uAug05
Length: 3773
Transcript: HMGA1.uAug05
Intron
Length: 1799
Transcript: HMGA1.uAug05
Length: 1799
Transcript: HMGA1.uAug05
Intron
Length: 672
Transcript: HMGA1.uAug05
Length: 672
Transcript: HMGA1.uAug05
Intron
Length: 1312
Transcript: HMGA1.uAug05
Length: 1312
Transcript: HMGA1.uAug05
Intron
Length: 26
Transcript: HMGA1.uAug05
Length: 26
Transcript: HMGA1.uAug05
Reaction
Expected peak: 193
Associated peak: 203,204,205,206
Repeated 51 time
Molarity: 3.73M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Expected peak: 193
Associated peak: 203,204,205,206
Repeated 51 time
Molarity: 3.73M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Reaction
Expected peak: 334
Associated peak: 310,313,322,323,325,326,351,352,353,354,355,356,357,358,359,360,361,370,373
Repeated 51 time
Molarity: 21.33M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 334
Associated peak: 310,313,322,323,325,326,351,352,353,354,355,356,357,358,359,360,361,370,373
Repeated 51 time
Molarity: 21.33M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Exon
Length: 60
Transcript: HMGA1.vaAug05
Length: 60
Transcript: HMGA1.vaAug05
Exon
Length: 179
Transcript: HMGA1.vaAug05
Length: 179
Transcript: HMGA1.vaAug05
Exon
Length: 84
Transcript: HMGA1.vaAug05
Length: 84
Transcript: HMGA1.vaAug05
Exon
Length: 419
Transcript: HMGA1.vaAug05
Length: 419
Transcript: HMGA1.vaAug05
Intron
Length: 3773
Transcript: HMGA1.vaAug05
Length: 3773
Transcript: HMGA1.vaAug05
Intron
Length: 1796
Transcript: HMGA1.vaAug05
Length: 1796
Transcript: HMGA1.vaAug05
Intron
Length: 672
Transcript: HMGA1.vaAug05
Length: 672
Transcript: HMGA1.vaAug05
Reaction
Expected peak: 193
Associated peak: 203,204,205,206
Repeated 51 time
Molarity: 3.73M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Expected peak: 193
Associated peak: 203,204,205,206
Repeated 51 time
Molarity: 3.73M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Exon
Length: 70
Transcript: HMGA1.vbAug05
Length: 70
Transcript: HMGA1.vbAug05
Exon
Length: 146
Transcript: HMGA1.vbAug05
Length: 146
Transcript: HMGA1.vbAug05
Exon
Length: 84
Transcript: HMGA1.vbAug05
Length: 84
Transcript: HMGA1.vbAug05
Exon
Length: 51
Transcript: HMGA1.vbAug05
Length: 51
Transcript: HMGA1.vbAug05
Exon
Length: 124
Transcript: HMGA1.vbAug05
Length: 124
Transcript: HMGA1.vbAug05
Intron
Length: 1350
Transcript: HMGA1.vbAug05
Length: 1350
Transcript: HMGA1.vbAug05
Intron
Length: 1829
Transcript: HMGA1.vbAug05
Length: 1829
Transcript: HMGA1.vbAug05
Intron
Length: 672
Transcript: HMGA1.vbAug05
Length: 672
Transcript: HMGA1.vbAug05
Intron
Length: 1312
Transcript: HMGA1.vbAug05
Length: 1312
Transcript: HMGA1.vbAug05
Reaction
Expected peak: 304
Associated peak: 300,302,304,305,307,309,310,313
Repeated 51 time
Molarity: 26.35M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 304
Associated peak: 300,302,304,305,307,309,310,313
Repeated 51 time
Molarity: 26.35M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Exon
Length: 29
Transcript: HMGA1.vcAug05
Length: 29
Transcript: HMGA1.vcAug05
Exon
Length: 179
Transcript: HMGA1.vcAug05
Length: 179
Transcript: HMGA1.vcAug05
Exon
Length: 84
Transcript: HMGA1.vcAug05
Length: 84
Transcript: HMGA1.vcAug05
Exon
Length: 51
Transcript: HMGA1.vcAug05
Length: 51
Transcript: HMGA1.vcAug05
Exon
Length: 164
Transcript: HMGA1.vcAug05
Length: 164
Transcript: HMGA1.vcAug05
Intron
Length: 3835
Transcript: HMGA1.vcAug05
Length: 3835
Transcript: HMGA1.vcAug05
Intron
Length: 1796
Transcript: HMGA1.vcAug05
Length: 1796
Transcript: HMGA1.vcAug05
Intron
Length: 672
Transcript: HMGA1.vcAug05
Length: 672
Transcript: HMGA1.vcAug05
Intron
Length: 1312
Transcript: HMGA1.vcAug05
Length: 1312
Transcript: HMGA1.vcAug05
Reaction
Expected peak: 131
Associated peak: None
Repeated 51 time
Molarity: 0.00M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Expected peak: 131
Associated peak: None
Repeated 51 time
Molarity: 0.00M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Reaction
Expected peak: 337
Associated peak: 322,323,325,326,351,352,353,354,355,356,357,358,359,360,361,370,373
Repeated 51 time
Molarity: 18.96M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 337
Associated peak: 322,323,325,326,351,352,353,354,355,356,357,358,359,360,361,370,373
Repeated 51 time
Molarity: 18.96M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Exon
Length: 91
Transcript: HMGA1.vdAug05
Length: 91
Transcript: HMGA1.vdAug05
Exon
Length: 146
Transcript: HMGA1.vdAug05
Length: 146
Transcript: HMGA1.vdAug05
Exon
Length: 84
Transcript: HMGA1.vdAug05
Length: 84
Transcript: HMGA1.vdAug05
Exon
Length: 51
Transcript: HMGA1.vdAug05
Length: 51
Transcript: HMGA1.vdAug05
Exon
Length: 1401
Transcript: HMGA1.vdAug05
Length: 1401
Transcript: HMGA1.vdAug05
Intron
Length: 3773
Transcript: HMGA1.vdAug05
Length: 3773
Transcript: HMGA1.vdAug05
Intron
Length: 1829
Transcript: HMGA1.vdAug05
Length: 1829
Transcript: HMGA1.vdAug05
Intron
Length: 672
Transcript: HMGA1.vdAug05
Length: 672
Transcript: HMGA1.vdAug05
Intron
Length: 1312
Transcript: HMGA1.vdAug05
Length: 1312
Transcript: HMGA1.vdAug05
Reaction
Expected peak: 193
Associated peak: 203,204,205,206
Repeated 51 time
Molarity: 3.73M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Expected peak: 193
Associated peak: 203,204,205,206
Repeated 51 time
Molarity: 3.73M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Reaction
Expected peak: 304
Associated peak: 300,302,304,305,307,309,310,313
Repeated 51 time
Molarity: 26.35M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 304
Associated peak: 300,302,304,305,307,309,310,313
Repeated 51 time
Molarity: 26.35M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Exon
Length: 60
Transcript: HMGA1.veAug05
Length: 60
Transcript: HMGA1.veAug05
Exon
Length: 146
Transcript: HMGA1.veAug05
Length: 146
Transcript: HMGA1.veAug05
Exon
Length: 81
Transcript: HMGA1.veAug05
Length: 81
Transcript: HMGA1.veAug05
Exon
Length: 51
Transcript: HMGA1.veAug05
Length: 51
Transcript: HMGA1.veAug05
Exon
Length: 552
Transcript: HMGA1.veAug05
Length: 552
Transcript: HMGA1.veAug05
Intron
Length: 3773
Transcript: HMGA1.veAug05
Length: 3773
Transcript: HMGA1.veAug05
Intron
Length: 1832
Transcript: HMGA1.veAug05
Length: 1832
Transcript: HMGA1.veAug05
Intron
Length: 672
Transcript: HMGA1.veAug05
Length: 672
Transcript: HMGA1.veAug05
Intron
Length: 1312
Transcript: HMGA1.veAug05
Length: 1312
Transcript: HMGA1.veAug05
Reaction
Expected peak: 193
Associated peak: 203,204,205,206
Repeated 51 time
Molarity: 3.73M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Expected peak: 193
Associated peak: 203,204,205,206
Repeated 51 time
Molarity: 3.73M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Reaction
Expected peak: 301
Associated peak: 300,302,304,305,307,309,310,313
Repeated 51 time
Molarity: 26.35M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 301
Associated peak: 300,302,304,305,307,309,310,313
Repeated 51 time
Molarity: 26.35M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Exon
Length: 69
Transcript: HMGA1.vfAug05
Length: 69
Transcript: HMGA1.vfAug05
Exon
Length: 179
Transcript: HMGA1.vfAug05
Length: 179
Transcript: HMGA1.vfAug05
Exon
Length: 84
Transcript: HMGA1.vfAug05
Length: 84
Transcript: HMGA1.vfAug05
Exon
Length: 51
Transcript: HMGA1.vfAug05
Length: 51
Transcript: HMGA1.vfAug05
Exon
Length: 439
Transcript: HMGA1.vfAug05
Length: 439
Transcript: HMGA1.vfAug05
Intron
Length: 3753
Transcript: HMGA1.vfAug05
Length: 3753
Transcript: HMGA1.vfAug05
Intron
Length: 1796
Transcript: HMGA1.vfAug05
Length: 1796
Transcript: HMGA1.vfAug05
Intron
Length: 672
Transcript: HMGA1.vfAug05
Length: 672
Transcript: HMGA1.vfAug05
Intron
Length: 1312
Transcript: HMGA1.vfAug05
Length: 1312
Transcript: HMGA1.vfAug05
Reaction
Expected peak: 337
Associated peak: 322,323,325,326,351,352,353,354,355,356,357,358,359,360,361,370,373
Repeated 51 time
Molarity: 18.96M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 337
Associated peak: 322,323,325,326,351,352,353,354,355,356,357,358,359,360,361,370,373
Repeated 51 time
Molarity: 18.96M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Exon
Length: 42
Transcript: HMGA1.vgAug05
Length: 42
Transcript: HMGA1.vgAug05
Exon
Length: 146
Transcript: HMGA1.vgAug05
Length: 146
Transcript: HMGA1.vgAug05
Exon
Length: 84
Transcript: HMGA1.vgAug05
Length: 84
Transcript: HMGA1.vgAug05
Exon
Length: 51
Transcript: HMGA1.vgAug05
Length: 51
Transcript: HMGA1.vgAug05
Exon
Length: 1399
Transcript: HMGA1.vgAug05
Length: 1399
Transcript: HMGA1.vgAug05
Intron
Length: 3775
Transcript: HMGA1.vgAug05
Length: 3775
Transcript: HMGA1.vgAug05
Intron
Length: 1829
Transcript: HMGA1.vgAug05
Length: 1829
Transcript: HMGA1.vgAug05
Intron
Length: 672
Transcript: HMGA1.vgAug05
Length: 672
Transcript: HMGA1.vgAug05
Intron
Length: 1312
Transcript: HMGA1.vgAug05
Length: 1312
Transcript: HMGA1.vgAug05
Reaction
Expected peak: 191
Associated peak: 186,203,204,205,206
Repeated 51 time
Molarity: 3.76M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Expected peak: 191
Associated peak: 186,203,204,205,206
Repeated 51 time
Molarity: 3.76M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Reaction
Expected peak: 304
Associated peak: 300,302,304,305,307,309,310,313
Repeated 51 time
Molarity: 26.35M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 304
Associated peak: 300,302,304,305,307,309,310,313
Repeated 51 time
Molarity: 26.35M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Exon
Length: 607
Transcript: HMGA1.vhAug05
Length: 607
Transcript: HMGA1.vhAug05
Exon
Length: 179
Transcript: HMGA1.vhAug05
Length: 179
Transcript: HMGA1.vhAug05
Exon
Length: 84
Transcript: HMGA1.vhAug05
Length: 84
Transcript: HMGA1.vhAug05
Exon
Length: 51
Transcript: HMGA1.vhAug05
Length: 51
Transcript: HMGA1.vhAug05
Exon
Length: 124
Transcript: HMGA1.vhAug05
Length: 124
Transcript: HMGA1.vhAug05
Intron
Length: 500
Transcript: HMGA1.vhAug05
Length: 500
Transcript: HMGA1.vhAug05
Intron
Length: 1796
Transcript: HMGA1.vhAug05
Length: 1796
Transcript: HMGA1.vhAug05
Intron
Length: 672
Transcript: HMGA1.vhAug05
Length: 672
Transcript: HMGA1.vhAug05
Intron
Length: 1312
Transcript: HMGA1.vhAug05
Length: 1312
Transcript: HMGA1.vhAug05
Reaction
Expected peak: 337
Associated peak: 322,323,325,326,351,352,353,354,355,356,357,358,359,360,361,370,373
Repeated 51 time
Molarity: 18.96M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 337
Associated peak: 322,323,325,326,351,352,353,354,355,356,357,358,359,360,361,370,373
Repeated 51 time
Molarity: 18.96M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Exon
Length: 22
Transcript: HMGA1.viAug05
Length: 22
Transcript: HMGA1.viAug05
Exon
Length: 146
Transcript: HMGA1.viAug05
Length: 146
Transcript: HMGA1.viAug05
Exon
Length: 84
Transcript: HMGA1.viAug05
Length: 84
Transcript: HMGA1.viAug05
Exon
Length: 1198
Transcript: HMGA1.viAug05
Length: 1198
Transcript: HMGA1.viAug05
Intron
Length: 3773
Transcript: HMGA1.viAug05
Length: 3773
Transcript: HMGA1.viAug05
Intron
Length: 1829
Transcript: HMGA1.viAug05
Length: 1829
Transcript: HMGA1.viAug05
Intron
Length: 2237
Transcript: HMGA1.viAug05
Length: 2237
Transcript: HMGA1.viAug05
Reaction
Expected peak: 193
Associated peak: 203,204,205,206
Repeated 51 time
Molarity: 3.73M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Expected peak: 193
Associated peak: 203,204,205,206
Repeated 51 time
Molarity: 3.73M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Exon
Length: 241
Transcript: HMGA1.vjAug05
Length: 241
Transcript: HMGA1.vjAug05
Exon
Length: 146
Transcript: HMGA1.vjAug05
Length: 146
Transcript: HMGA1.vjAug05
Exon
Length: 84
Transcript: HMGA1.vjAug05
Length: 84
Transcript: HMGA1.vjAug05
Exon
Length: 51
Transcript: HMGA1.vjAug05
Length: 51
Transcript: HMGA1.vjAug05
Exon
Length: 1379
Transcript: HMGA1.vjAug05
Length: 1379
Transcript: HMGA1.vjAug05
Intron
Length: 2352
Transcript: HMGA1.vjAug05
Length: 2352
Transcript: HMGA1.vjAug05
Intron
Length: 1829
Transcript: HMGA1.vjAug05
Length: 1829
Transcript: HMGA1.vjAug05
Intron
Length: 672
Transcript: HMGA1.vjAug05
Length: 672
Transcript: HMGA1.vjAug05
Intron
Length: 1312
Transcript: HMGA1.vjAug05
Length: 1312
Transcript: HMGA1.vjAug05
Reaction
Expected peak: 304
Associated peak: 300,302,304,305,307,309,310,313
Repeated 51 time
Molarity: 26.35M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 304
Associated peak: 300,302,304,305,307,309,310,313
Repeated 51 time
Molarity: 26.35M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Exon
Length: 241
Transcript: HMGA1.vkAug05
Length: 241
Transcript: HMGA1.vkAug05
Exon
Length: 146
Transcript: HMGA1.vkAug05
Length: 146
Transcript: HMGA1.vkAug05
Exon
Length: 81
Transcript: HMGA1.vkAug05
Length: 81
Transcript: HMGA1.vkAug05
Exon
Length: 51
Transcript: HMGA1.vkAug05
Length: 51
Transcript: HMGA1.vkAug05
Exon
Length: 431
Transcript: HMGA1.vkAug05
Length: 431
Transcript: HMGA1.vkAug05
Intron
Length: 2352
Transcript: HMGA1.vkAug05
Length: 2352
Transcript: HMGA1.vkAug05
Intron
Length: 1832
Transcript: HMGA1.vkAug05
Length: 1832
Transcript: HMGA1.vkAug05
Intron
Length: 672
Transcript: HMGA1.vkAug05
Length: 672
Transcript: HMGA1.vkAug05
Intron
Length: 1312
Transcript: HMGA1.vkAug05
Length: 1312
Transcript: HMGA1.vkAug05
Reaction
Expected peak: 301
Associated peak: 300,302,304,305,307,309,310,313
Repeated 51 time
Molarity: 26.35M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 301
Associated peak: 300,302,304,305,307,309,310,313
Repeated 51 time
Molarity: 26.35M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Exon
Length: 168
Transcript: HMGA1.vlAug05
Length: 168
Transcript: HMGA1.vlAug05
Exon
Length: 146
Transcript: HMGA1.vlAug05
Length: 146
Transcript: HMGA1.vlAug05
Exon
Length: 84
Transcript: HMGA1.vlAug05
Length: 84
Transcript: HMGA1.vlAug05
Exon
Length: 51
Transcript: HMGA1.vlAug05
Length: 51
Transcript: HMGA1.vlAug05
Exon
Length: 1401
Transcript: HMGA1.vlAug05
Length: 1401
Transcript: HMGA1.vlAug05
Intron
Length: 1779
Transcript: HMGA1.vlAug05
Length: 1779
Transcript: HMGA1.vlAug05
Intron
Length: 1829
Transcript: HMGA1.vlAug05
Length: 1829
Transcript: HMGA1.vlAug05
Intron
Length: 672
Transcript: HMGA1.vlAug05
Length: 672
Transcript: HMGA1.vlAug05
Intron
Length: 1312
Transcript: HMGA1.vlAug05
Length: 1312
Transcript: HMGA1.vlAug05
Reaction
Expected peak: 304
Associated peak: 300,302,304,305,307,309,310,313
Repeated 51 time
Molarity: 26.35M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 304
Associated peak: 300,302,304,305,307,309,310,313
Repeated 51 time
Molarity: 26.35M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Exon
Length: 25
Transcript: HMGA1.vmAug05
Length: 25
Transcript: HMGA1.vmAug05
Exon
Length: 179
Transcript: HMGA1.vmAug05
Length: 179
Transcript: HMGA1.vmAug05
Exon
Length: 69
Transcript: HMGA1.vmAug05
Length: 69
Transcript: HMGA1.vmAug05
Exon
Length: 124
Transcript: HMGA1.vmAug05
Length: 124
Transcript: HMGA1.vmAug05
Intron
Length: 3773
Transcript: HMGA1.vmAug05
Length: 3773
Transcript: HMGA1.vmAug05
Intron
Length: 1796
Transcript: HMGA1.vmAug05
Length: 1796
Transcript: HMGA1.vmAug05
Intron
Length: 2050
Transcript: HMGA1.vmAug05
Length: 2050
Transcript: HMGA1.vmAug05
Reaction
Expected peak: 193
Associated peak: 203,204,205,206
Repeated 51 time
Molarity: 3.73M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Expected peak: 193
Associated peak: 203,204,205,206
Repeated 51 time
Molarity: 3.73M
Forward: HMGA1.u.f.5
Reverse: HMGA1.u.r.9
Reaction
Expected peak: 271
Associated peak: 291,292,293,294,300,302,304,305
Repeated 51 time
Molarity: 13.74M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 271
Associated peak: 291,292,293,294,300,302,304,305
Repeated 51 time
Molarity: 13.74M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Exon
Length: 93
Transcript: HMGA1.vnAug05
Length: 93
Transcript: HMGA1.vnAug05
Exon
Length: 179
Transcript: HMGA1.vnAug05
Length: 179
Transcript: HMGA1.vnAug05
Exon
Length: 1371
Transcript: HMGA1.vnAug05
Length: 1371
Transcript: HMGA1.vnAug05
Intron
Length: 3419
Transcript: HMGA1.vnAug05
Length: 3419
Transcript: HMGA1.vnAug05
Intron
Length: 3915
Transcript: HMGA1.vnAug05
Length: 3915
Transcript: HMGA1.vnAug05
Reaction
Expected peak: 202
Associated peak: None
Repeated 51 time
Molarity: 0.00M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
Expected peak: 202
Associated peak: None
Repeated 51 time
Molarity: 0.00M
Forward: HMGA1.au.0.f
Reverse: HMGA1.u.r.18
HMGA1.u.r.18
GAGATGCCCTCCTCTTCCTC
GAGATGCCCTCCTCTTCCTC
HMGA1.u.f.5
CCCTGAGCCGGTGCT
CCCTGAGCCGGTGCT
HMGA1.u.r.9
GCTTCTCAGTGCCGTCCTT
GCTTCTCAGTGCCGTCCTT
HMGA1.au.0.f
CCCAGCCATCACTCTTCC
CCCAGCCATCACTCTTCC