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Home Public data LGFUS Public Data Identification of alternative splicing markers for breast cancer 2. Breast Validation Screen

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https://rnomics.med.usherbrooke.ca/palace?purl=/data/related/3/gene/450705

2. Breast Validation Screen ⚙

Gene primer pair list : Primer pairs

Forward	Reverse	Occurences	View
UTRN.u.f.80	UTRN.u.r.77	51	View
UTRN.u.f.80	UTRN.u.r.78	51	View
UTRN.u.f.81	UTRN.au.8.r	51	View
UTRN.u.f.81	UTRN.u.r.77	51	View
UTRN.u.f.81	UTRN.u.r.78	51	View
UTRN.u.f.81	UTRN.u.r.81	51	View

current - show all

Page 1 of 1, records 1 to 6 of 6

Transcript map : UTRN

Exon
Length: 145
Transcript: UTRN.aAug05

Exon
Length: 171
Transcript: UTRN.aAug05

Exon
Length: 62
Transcript: UTRN.aAug05

Exon
Length: 93
Transcript: UTRN.aAug05

Exon
Length: 78
Transcript: UTRN.aAug05

Exon
Length: 93
Transcript: UTRN.aAug05

Exon
Length: 173
Transcript: UTRN.aAug05

Exon
Length: 116
Transcript: UTRN.aAug05

Exon
Length: 161
Transcript: UTRN.aAug05

Exon
Length: 204
Transcript: UTRN.aAug05

Exon
Length: 182
Transcript: UTRN.aAug05

Exon
Length: 151
Transcript: UTRN.aAug05

Exon
Length: 120
Transcript: UTRN.aAug05

Exon
Length: 102
Transcript: UTRN.aAug05

Exon
Length: 108
Transcript: UTRN.aAug05

Exon
Length: 180
Transcript: UTRN.aAug05

Exon
Length: 170
Transcript: UTRN.aAug05

Exon
Length: 124
Transcript: UTRN.aAug05

Exon
Length: 88
Transcript: UTRN.aAug05

Exon
Length: 242
Transcript: UTRN.aAug05

Exon
Length: 181
Transcript: UTRN.aAug05

Exon
Length: 146
Transcript: UTRN.aAug05

Exon
Length: 213
Transcript: UTRN.aAug05

Exon
Length: 114
Transcript: UTRN.aAug05

Exon
Length: 156
Transcript: UTRN.aAug05

Exon
Length: 171
Transcript: UTRN.aAug05

Exon
Length: 180
Transcript: UTRN.aAug05

Exon
Length: 135
Transcript: UTRN.aAug05

Exon
Length: 150
Transcript: UTRN.aAug05

Exon
Length: 162
Transcript: UTRN.aAug05

Exon
Length: 129
Transcript: UTRN.aAug05

Exon
Length: 174
Transcript: UTRN.aAug05

Exon
Length: 156
Transcript: UTRN.aAug05

Exon
Length: 171
Transcript: UTRN.aAug05

Exon
Length: 180
Transcript: UTRN.aAug05

Exon
Length: 129
Transcript: UTRN.aAug05

Exon
Length: 171
Transcript: UTRN.aAug05

Exon
Length: 159
Transcript: UTRN.aAug05

Exon
Length: 138
Transcript: UTRN.aAug05

Exon
Length: 192
Transcript: UTRN.aAug05

Exon
Length: 173
Transcript: UTRN.aAug05

Exon
Length: 151
Transcript: UTRN.aAug05

Exon
Length: 176
Transcript: UTRN.aAug05

Exon
Length: 136
Transcript: UTRN.aAug05

Exon
Length: 150
Transcript: UTRN.aAug05

Exon
Length: 76
Transcript: UTRN.aAug05

Exon
Length: 215
Transcript: UTRN.aAug05

Exon
Length: 118
Transcript: UTRN.aAug05

Exon
Length: 206
Transcript: UTRN.aAug05

Exon
Length: 155
Transcript: UTRN.aAug05

Exon
Length: 190
Transcript: UTRN.aAug05

Exon
Length: 173
Transcript: UTRN.aAug05

Exon
Length: 157
Transcript: UTRN.aAug05

Exon
Length: 130
Transcript: UTRN.aAug05

Exon
Length: 269
Transcript: UTRN.aAug05

Exon
Length: 147
Transcript: UTRN.aAug05

Exon
Length: 79
Transcript: UTRN.aAug05

Exon
Length: 61
Transcript: UTRN.aAug05

Exon
Length: 62
Transcript: UTRN.aAug05

Exon
Length: 75
Transcript: UTRN.aAug05

Exon
Length: 202
Transcript: UTRN.aAug05

Exon
Length: 86
Transcript: UTRN.aAug05

Exon
Length: 158
Transcript: UTRN.aAug05

Exon
Length: 167
Transcript: UTRN.aAug05

Exon
Length: 112
Transcript: UTRN.aAug05

Exon
Length: 137
Transcript: UTRN.aAug05

Exon
Length: 39
Transcript: UTRN.aAug05

Exon
Length: 66
Transcript: UTRN.aAug05

Exon
Length: 159
Transcript: UTRN.aAug05

Exon
Length: 241
Transcript: UTRN.aAug05

Exon
Length: 112
Transcript: UTRN.aAug05

Exon
Length: 93
Transcript: UTRN.aAug05

Exon
Length: 23
Transcript: UTRN.aAug05

Exon
Length: 2048
Transcript: UTRN.aAug05

Intron
Length: 5165
Transcript: UTRN.aAug05

Intron
Length: 111215
Transcript: UTRN.aAug05

Intron
Length: 18693
Transcript: UTRN.aAug05

Intron
Length: 1578
Transcript: UTRN.aAug05

Intron
Length: 359
Transcript: UTRN.aAug05

Intron
Length: 2208
Transcript: UTRN.aAug05

Intron
Length: 2318
Transcript: UTRN.aAug05

Intron
Length: 687
Transcript: UTRN.aAug05

Intron
Length: 6193
Transcript: UTRN.aAug05

Intron
Length: 1426
Transcript: UTRN.aAug05

Intron
Length: 998
Transcript: UTRN.aAug05

Intron
Length: 1456
Transcript: UTRN.aAug05

Intron
Length: 3809
Transcript: UTRN.aAug05

Intron
Length: 2828
Transcript: UTRN.aAug05

Intron
Length: 283
Transcript: UTRN.aAug05

Intron
Length: 818
Transcript: UTRN.aAug05

Intron
Length: 2600
Transcript: UTRN.aAug05

Intron
Length: 2288
Transcript: UTRN.aAug05

Intron
Length: 4900
Transcript: UTRN.aAug05

Intron
Length: 162
Transcript: UTRN.aAug05

Intron
Length: 1842
Transcript: UTRN.aAug05

Intron
Length: 1311
Transcript: UTRN.aAug05

Intron
Length: 10853
Transcript: UTRN.aAug05

Intron
Length: 770
Transcript: UTRN.aAug05

Intron
Length: 5052
Transcript: UTRN.aAug05

Intron
Length: 2226
Transcript: UTRN.aAug05

Intron
Length: 2996
Transcript: UTRN.aAug05

Intron
Length: 2028
Transcript: UTRN.aAug05

Intron
Length: 975
Transcript: UTRN.aAug05

Intron
Length: 1236
Transcript: UTRN.aAug05

Intron
Length: 729
Transcript: UTRN.aAug05

Intron
Length: 2198
Transcript: UTRN.aAug05

Intron
Length: 5800
Transcript: UTRN.aAug05

Intron
Length: 11516
Transcript: UTRN.aAug05

Intron
Length: 2785
Transcript: UTRN.aAug05

Intron
Length: 612
Transcript: UTRN.aAug05

Intron
Length: 1408
Transcript: UTRN.aAug05

Intron
Length: 423
Transcript: UTRN.aAug05

Intron
Length: 5031
Transcript: UTRN.aAug05

Intron
Length: 844
Transcript: UTRN.aAug05

Intron
Length: 7863
Transcript: UTRN.aAug05

Intron
Length: 1882
Transcript: UTRN.aAug05

Intron
Length: 4321
Transcript: UTRN.aAug05

Intron
Length: 1576
Transcript: UTRN.aAug05

Intron
Length: 3351
Transcript: UTRN.aAug05

Intron
Length: 5769
Transcript: UTRN.aAug05

Intron
Length: 2110
Transcript: UTRN.aAug05

Intron
Length: 3605
Transcript: UTRN.aAug05

Intron
Length: 2263
Transcript: UTRN.aAug05

Intron
Length: 19787
Transcript: UTRN.aAug05

Intron
Length: 101117
Transcript: UTRN.aAug05

Intron
Length: 21508
Transcript: UTRN.aAug05

Intron
Length: 30113
Transcript: UTRN.aAug05

Intron
Length: 17759
Transcript: UTRN.aAug05

Intron
Length: 3291
Transcript: UTRN.aAug05

Intron
Length: 2767
Transcript: UTRN.aAug05

Intron
Length: 3130
Transcript: UTRN.aAug05

Intron
Length: 13917
Transcript: UTRN.aAug05

Intron
Length: 2321
Transcript: UTRN.aAug05

Intron
Length: 7557
Transcript: UTRN.aAug05

Intron
Length: 7070
Transcript: UTRN.aAug05

Intron
Length: 4554
Transcript: UTRN.aAug05

Intron
Length: 3832
Transcript: UTRN.aAug05

Intron
Length: 5045
Transcript: UTRN.aAug05

Intron
Length: 17734
Transcript: UTRN.aAug05

Intron
Length: 6329
Transcript: UTRN.aAug05

Intron
Length: 224
Transcript: UTRN.aAug05

Intron
Length: 1113
Transcript: UTRN.aAug05

Intron
Length: 6924
Transcript: UTRN.aAug05

Intron
Length: 362
Transcript: UTRN.aAug05

Intron
Length: 2631
Transcript: UTRN.aAug05

Intron
Length: 1455
Transcript: UTRN.aAug05

Intron
Length: 5972
Transcript: UTRN.aAug05

Intron
Length: 4161
Transcript: UTRN.aAug05

Reaction
Expected peak: 224
Associated peak: 238,239,240,241,249,250
Repeated 51 time
Molarity: 31.35M
Forward: UTRN.u.f.81
Reverse: UTRN.u.r.77

Reaction
Expected peak: 270
Associated peak: 280,281,282,283,295,296,297
Repeated 51 time
Molarity: 25.35M
Forward: UTRN.u.f.81
Reverse: UTRN.u.r.78

Reaction
Expected peak: 358
Associated peak: 386,387,388,389,390,391,392,400,402
Repeated 51 time
Molarity: 14.02M
Forward: UTRN.u.f.80
Reverse: UTRN.u.r.77

Reaction
Expected peak: 377
Associated peak: 404,405,406,407,408,409,410,411,413
Repeated 51 time
Molarity: 39.63M
Forward: UTRN.u.f.81
Reverse: UTRN.au.8.r

Reaction
Expected peak: 404
Associated peak: 435,436,437,438,439,440,442,443,444,450,453,456
Repeated 51 time
Molarity: 10.48M
Forward: UTRN.u.f.80
Reverse: UTRN.u.r.78

Reaction
Expected peak: 430
Associated peak: 456,457,458,459,460,461
Repeated 51 time
Molarity: 24.77M
Forward: UTRN.u.f.81
Reverse: UTRN.u.r.81

Exon
Length: 51
Transcript: UTRN.bAug05

Exon
Length: 158
Transcript: UTRN.bAug05

Exon
Length: 167
Transcript: UTRN.bAug05

Exon
Length: 112
Transcript: UTRN.bAug05

Exon
Length: 137
Transcript: UTRN.bAug05

Exon
Length: 66
Transcript: UTRN.bAug05

Exon
Length: 159
Transcript: UTRN.bAug05

Exon
Length: 241
Transcript: UTRN.bAug05

Exon
Length: 112
Transcript: UTRN.bAug05

Intron
Length: 4554
Transcript: UTRN.bAug05

Intron
Length: 3832
Transcript: UTRN.bAug05

Intron
Length: 5045
Transcript: UTRN.bAug05

Intron
Length: 17734
Transcript: UTRN.bAug05

Intron
Length: 6592
Transcript: UTRN.bAug05

Intron
Length: 1113
Transcript: UTRN.bAug05

Intron
Length: 6924
Transcript: UTRN.bAug05

Intron
Length: 362
Transcript: UTRN.bAug05

Intron
Length: 2631
Transcript: UTRN.bAug05

Reaction
Expected peak: 185
Associated peak: 197,198,199,200,201,210,211
Repeated 51 time
Molarity: 5.41M
Forward: UTRN.u.f.81
Reverse: UTRN.u.r.77

Reaction
Expected peak: 231
Associated peak: 244,245,246,247,262,264
Repeated 51 time
Molarity: 4.55M
Forward: UTRN.u.f.81
Reverse: UTRN.u.r.78

Reaction
Expected peak: 319
Associated peak: 333,334,335,336,337,338,339,340,341,344
Repeated 51 time
Molarity: 2.13M
Forward: UTRN.u.f.80
Reverse: UTRN.u.r.77

Reaction
Expected peak: 338
Associated peak: 356,357,358,359,360,361,362,363,364,365
Repeated 51 time
Molarity: 8.44M
Forward: UTRN.u.f.81
Reverse: UTRN.au.8.r

Reaction
Expected peak: 365
Associated peak: 394,395,396,397,398,399,408,409
Repeated 51 time
Molarity: 1.59M
Forward: UTRN.u.f.80
Reverse: UTRN.u.r.78

Reaction
Expected peak: 391
Associated peak: 416,417,418,419,420,421,422,423,424
Repeated 51 time
Molarity: 5.18M
Forward: UTRN.u.f.81
Reverse: UTRN.u.r.81

Exon
Length: 248
Transcript: UTRN.cAug05

Exon
Length: 112
Transcript: UTRN.cAug05

Exon
Length: 137
Transcript: UTRN.cAug05

Exon
Length: 66
Transcript: UTRN.cAug05

Exon
Length: 159
Transcript: UTRN.cAug05

Exon
Length: 58
Transcript: UTRN.cAug05

Exon
Length: 89
Transcript: UTRN.cAug05

Exon
Length: 112
Transcript: UTRN.cAug05

Exon
Length: 93
Transcript: UTRN.cAug05

Exon
Length: 23
Transcript: UTRN.cAug05

Exon
Length: 170
Transcript: UTRN.cAug05

Intron
Length: 5045
Transcript: UTRN.cAug05

Intron
Length: 17734
Transcript: UTRN.cAug05

Intron
Length: 6592
Transcript: UTRN.cAug05

Intron
Length: 1113
Transcript: UTRN.cAug05

Intron
Length: 6924
Transcript: UTRN.cAug05

Intron
Length: 362
Transcript: UTRN.cAug05

Intron
Length: 94
Transcript: UTRN.cAug05

Intron
Length: 2631
Transcript: UTRN.cAug05

Intron
Length: 1455
Transcript: UTRN.cAug05

Intron
Length: 5972
Transcript: UTRN.cAug05

Intron
Length: 4161
Transcript: UTRN.cAug05

Reaction
Expected peak: 185
Associated peak: 197,198,199,200,201,210,211
Repeated 51 time
Molarity: 5.41M
Forward: UTRN.u.f.81
Reverse: UTRN.u.r.77

Reaction
Expected peak: 231
Associated peak: 244,245,246,247,262,264
Repeated 51 time
Molarity: 4.55M
Forward: UTRN.u.f.81
Reverse: UTRN.u.r.78

Reaction
Expected peak: 319
Associated peak: 333,334,335,336,337,338,339,340,341,344
Repeated 51 time
Molarity: 2.13M
Forward: UTRN.u.f.80
Reverse: UTRN.u.r.77

Reaction
Expected peak: 338
Associated peak: 356,357,358,359,360,361,362,363,364,365
Repeated 51 time
Molarity: 8.44M
Forward: UTRN.u.f.81
Reverse: UTRN.au.8.r

Reaction
Expected peak: 365
Associated peak: 394,395,396,397,398,399,408,409
Repeated 51 time
Molarity: 1.59M
Forward: UTRN.u.f.80
Reverse: UTRN.u.r.78

Reaction
Expected peak: 391
Associated peak: 416,417,418,419,420,421,422,423,424
Repeated 51 time
Molarity: 5.18M
Forward: UTRN.u.f.81
Reverse: UTRN.u.r.81

Exon
Length: 248
Transcript: UTRN.dAug05

Exon
Length: 112
Transcript: UTRN.dAug05

Exon
Length: 137
Transcript: UTRN.dAug05

Exon
Length: 39
Transcript: UTRN.dAug05

Exon
Length: 66
Transcript: UTRN.dAug05

Exon
Length: 82
Transcript: UTRN.dAug05

Intron
Length: 5045
Transcript: UTRN.dAug05

Intron
Length: 17734
Transcript: UTRN.dAug05

Intron
Length: 6329
Transcript: UTRN.dAug05

Intron
Length: 224
Transcript: UTRN.dAug05

Intron
Length: 1113
Transcript: UTRN.dAug05

Intron
Length: 6924
Transcript: UTRN.dAug05

Reaction
Expected peak: 224
Associated peak: 238,239,240,241,249,250
Repeated 51 time
Molarity: 31.35M
Forward: UTRN.u.f.81
Reverse: UTRN.u.r.77

Reaction
Expected peak: 270
Associated peak: 280,281,282,283,295,296,297
Repeated 51 time
Molarity: 25.35M
Forward: UTRN.u.f.81
Reverse: UTRN.u.r.78

Reaction
Expected peak: 358
Associated peak: 386,387,388,389,390,391,392,400,402
Repeated 51 time
Molarity: 14.02M
Forward: UTRN.u.f.80
Reverse: UTRN.u.r.77

Reaction
Expected peak: 377
Associated peak: 404,405,406,407,408,409,410,411,413
Repeated 51 time
Molarity: 39.63M
Forward: UTRN.u.f.81
Reverse: UTRN.au.8.r

Reaction
Expected peak: 404
Associated peak: 435,436,437,438,439,440,442,443,444,450,453,456
Repeated 51 time
Molarity: 10.48M
Forward: UTRN.u.f.80
Reverse: UTRN.u.r.78

Exon
Length: 215
Transcript: UTRN.eAug05

Exon
Length: 151
Transcript: UTRN.eAug05

Exon
Length: 176
Transcript: UTRN.eAug05

Exon
Length: 136
Transcript: UTRN.eAug05

Exon
Length: 56
Transcript: UTRN.eAug05

Intron
Length: 1714
Transcript: UTRN.eAug05

Intron
Length: 1882
Transcript: UTRN.eAug05

Intron
Length: 4321
Transcript: UTRN.eAug05

Intron
Length: 1576
Transcript: UTRN.eAug05

Exon
Length: 140
Transcript: UTRN.fAug05

Exon
Length: 62
Transcript: UTRN.fAug05

Exon
Length: 93
Transcript: UTRN.fAug05

Exon
Length: 78
Transcript: UTRN.fAug05

Exon
Length: 93
Transcript: UTRN.fAug05

Exon
Length: 155
Transcript: UTRN.fAug05

Intron
Length: 58818
Transcript: UTRN.fAug05

Intron
Length: 18693
Transcript: UTRN.fAug05

Intron
Length: 1578
Transcript: UTRN.fAug05

Intron
Length: 359
Transcript: UTRN.fAug05

Intron
Length: 2208
Transcript: UTRN.fAug05

Exon
Length: 93
Transcript: UTRN.gAug05

Exon
Length: 112
Transcript: UTRN.gAug05

Exon
Length: 137
Transcript: UTRN.gAug05

Exon
Length: 66
Transcript: UTRN.gAug05

Exon
Length: 150
Transcript: UTRN.gAug05

Intron
Length: 3562
Transcript: UTRN.gAug05

Intron
Length: 17734
Transcript: UTRN.gAug05

Intron
Length: 6592
Transcript: UTRN.gAug05

Intron
Length: 1113
Transcript: UTRN.gAug05

Intron
Length: 6924
Transcript: UTRN.gAug05

Reaction
Expected peak: 185
Associated peak: 197,198,199,200,201,210,211
Repeated 51 time
Molarity: 5.41M
Forward: UTRN.u.f.81
Reverse: UTRN.u.r.77

Reaction
Expected peak: 231
Associated peak: 244,245,246,247,262,264
Repeated 51 time
Molarity: 4.55M
Forward: UTRN.u.f.81
Reverse: UTRN.u.r.78

Reaction
Expected peak: 319
Associated peak: 333,334,335,336,337,338,339,340,341,344
Repeated 51 time
Molarity: 2.13M
Forward: UTRN.u.f.80
Reverse: UTRN.u.r.77

Reaction
Expected peak: 338
Associated peak: 356,357,358,359,360,361,362,363,364,365
Repeated 51 time
Molarity: 8.44M
Forward: UTRN.u.f.81
Reverse: UTRN.au.8.r

Reaction
Expected peak: 365
Associated peak: 394,395,396,397,398,399,408,409
Repeated 51 time
Molarity: 1.59M
Forward: UTRN.u.f.80
Reverse: UTRN.u.r.78

Exon
Length: 199
Transcript: UTRN.hAug05

Exon
Length: 62
Transcript: UTRN.hAug05

Exon
Length: 93
Transcript: UTRN.hAug05

Exon
Length: 78
Transcript: UTRN.hAug05

Exon
Length: 93
Transcript: UTRN.hAug05

Exon
Length: 75
Transcript: UTRN.hAug05

Intron
Length: 72104
Transcript: UTRN.hAug05

Intron
Length: 18693
Transcript: UTRN.hAug05

Intron
Length: 1578
Transcript: UTRN.hAug05

Intron
Length: 359
Transcript: UTRN.hAug05

Intron
Length: 2208
Transcript: UTRN.hAug05

Exon
Length: 547
Transcript: UTRN.iAug05

Exon
Length: 171
Transcript: UTRN.iAug05

Exon
Length: 118
Transcript: UTRN.iAug05

Exon
Length: 215
Transcript: UTRN.iAug05

Intron
Length: 5915
Transcript: UTRN.iAug05

Intron
Length: 16067
Transcript: UTRN.iAug05

Intron
Length: 385
Transcript: UTRN.iAug05

Exon
Length: 432
Transcript: UTRN.jAug05

Exon
Length: 147
Transcript: UTRN.jAug05

Intron
Length: 18130
Transcript: UTRN.jAug05

Exon
Length: 128
Transcript: UTRN.kAug05

Exon
Length: 93
Transcript: UTRN.kAug05

Exon
Length: 23
Transcript: UTRN.kAug05

Exon
Length: 132
Transcript: UTRN.kAug05

Intron
Length: 4198
Transcript: UTRN.kAug05

Intron
Length: 5972
Transcript: UTRN.kAug05

Intron
Length: 4161
Transcript: UTRN.kAug05

Exon
Length: 398
Transcript: UTRN.lAug05

Exon
Length: 93
Transcript: UTRN.lAug05

Intron
Length: 1455
Transcript: UTRN.lAug05

Exon
Length: 85
Transcript: UTRN.mAug05

Exon
Length: 382
Transcript: UTRN.mAug05

Intron
Length: 3130
Transcript: UTRN.mAug05

Exon
Length: 363
Transcript: UTRN.shed1.aAug05

Exon
Length: 206
Transcript: UTRN.shed2.aAug05

Exon
Length: 445
Transcript: UTRN.shed3.aAug05

Exon
Length: 1830
Transcript: UTRN.shed4.aAug05

Exon
Length: 531
Transcript: UTRN.shed5.aAug05

Exon
Length: 497
Transcript: UTRN.shed6.aAug05

Exon
Length: 358
Transcript: UTRN.shed7.aAug05

Exon
Length: 791
Transcript: UTRN.shed8.aAug05

UTRN.u.f.80
TCGGGTCGAACAGCAAA

UTRN.u.r.78
TGGCAATACTGCTGGATGAG

UTRN.au.8.r
GGTCAGCAATGATCCTCTCC

UTRN.u.f.81
CAAACACCCTCGACTTGGTT

UTRN.u.r.81
CTGGTCCTTCAGCTGCTCAT

UTRN.u.r.77
TGGTGGAGCTGCTATCAGTG