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Home Public data LGFUS Public Data Identification of alternative splicing markers for breast cancer 2. Breast Validation Screen permalink
2. Breast Validation Screen ⚙
Gene primer pair list : Primer pairs
Forward Reverse Occurences View
TPD52.F12 TPD52.R11 51 View
Transcript map : TPD52
Exon
Length: 516
Transcript: TPD52.aAug05
Exon
Length: 116
Transcript: TPD52.aAug05
Exon
Length: 149
Transcript: TPD52.aAug05
Exon
Length: 102
Transcript: TPD52.aAug05
Exon
Length: 27
Transcript: TPD52.aAug05
Exon
Length: 42
Transcript: TPD52.aAug05
Exon
Length: 49
Transcript: TPD52.aAug05
Exon
Length: 279
Transcript: TPD52.aAug05
Intron
Length: 15721
Transcript: TPD52.aAug05
Intron
Length: 11047
Transcript: TPD52.aAug05
Intron
Length: 1653
Transcript: TPD52.aAug05
Intron
Length: 1055
Transcript: TPD52.aAug05
Intron
Length: 6236
Transcript: TPD52.aAug05
Intron
Length: 1498
Transcript: TPD52.aAug05
Intron
Length: 4384
Transcript: TPD52.aAug05
Reaction
Expected peak: 200
Associated peak: 192,214,215,216,217
Repeated 51 time
Molarity: 1.11M
Forward: TPD52.F12
Reverse: TPD52.R11
Exon
Length: 177
Transcript: TPD52.bAug05
Exon
Length: 116
Transcript: TPD52.bAug05
Exon
Length: 149
Transcript: TPD52.bAug05
Exon
Length: 102
Transcript: TPD52.bAug05
Exon
Length: 27
Transcript: TPD52.bAug05
Exon
Length: 42
Transcript: TPD52.bAug05
Exon
Length: 49
Transcript: TPD52.bAug05
Exon
Length: 3488
Transcript: TPD52.bAug05
Intron
Length: 106831
Transcript: TPD52.bAug05
Intron
Length: 11047
Transcript: TPD52.bAug05
Intron
Length: 1653
Transcript: TPD52.bAug05
Intron
Length: 1055
Transcript: TPD52.bAug05
Intron
Length: 6236
Transcript: TPD52.bAug05
Intron
Length: 1498
Transcript: TPD52.bAug05
Intron
Length: 4384
Transcript: TPD52.bAug05
Reaction
Expected peak: 200
Associated peak: 192,214,215,216,217
Repeated 51 time
Molarity: 1.11M
Forward: TPD52.F12
Reverse: TPD52.R11
Exon
Length: 461
Transcript: TPD52.cAug05
Exon
Length: 116
Transcript: TPD52.cAug05
Exon
Length: 149
Transcript: TPD52.cAug05
Exon
Length: 102
Transcript: TPD52.cAug05
Exon
Length: 49
Transcript: TPD52.cAug05
Exon
Length: 3364
Transcript: TPD52.cAug05
Intron
Length: 15721
Transcript: TPD52.cAug05
Intron
Length: 11047
Transcript: TPD52.cAug05
Intron
Length: 1653
Transcript: TPD52.cAug05
Intron
Length: 8858
Transcript: TPD52.cAug05
Intron
Length: 4384
Transcript: TPD52.cAug05
Exon
Length: 178
Transcript: TPD52.dAug05
Exon
Length: 116
Transcript: TPD52.dAug05
Exon
Length: 149
Transcript: TPD52.dAug05
Exon
Length: 102
Transcript: TPD52.dAug05
Exon
Length: 49
Transcript: TPD52.dAug05
Exon
Length: 3368
Transcript: TPD52.dAug05
Intron
Length: 106831
Transcript: TPD52.dAug05
Intron
Length: 11047
Transcript: TPD52.dAug05
Intron
Length: 1653
Transcript: TPD52.dAug05
Intron
Length: 8858
Transcript: TPD52.dAug05
Intron
Length: 4384
Transcript: TPD52.dAug05
Exon
Length: 122
Transcript: TPD52.eAug05
Exon
Length: 101
Transcript: TPD52.eAug05
Exon
Length: 149
Transcript: TPD52.eAug05
Exon
Length: 102
Transcript: TPD52.eAug05
Exon
Length: 49
Transcript: TPD52.eAug05
Exon
Length: 302
Transcript: TPD52.eAug05
Intron
Length: 106846
Transcript: TPD52.eAug05
Intron
Length: 11047
Transcript: TPD52.eAug05
Intron
Length: 1653
Transcript: TPD52.eAug05
Intron
Length: 8858
Transcript: TPD52.eAug05
Intron
Length: 4384
Transcript: TPD52.eAug05
Exon
Length: 140
Transcript: TPD52.fAug05
Exon
Length: 116
Transcript: TPD52.fAug05
Exon
Length: 149
Transcript: TPD52.fAug05
Exon
Length: 102
Transcript: TPD52.fAug05
Exon
Length: 42
Transcript: TPD52.fAug05
Exon
Length: 49
Transcript: TPD52.fAug05
Exon
Length: 133
Transcript: TPD52.fAug05
Intron
Length: 106427
Transcript: TPD52.fAug05
Intron
Length: 11047
Transcript: TPD52.fAug05
Intron
Length: 1653
Transcript: TPD52.fAug05
Intron
Length: 7318
Transcript: TPD52.fAug05
Intron
Length: 1498
Transcript: TPD52.fAug05
Intron
Length: 4384
Transcript: TPD52.fAug05
Reaction
Expected peak: 173
Associated peak: 188,189,190,191,192
Repeated 51 time
Molarity: 4.53M
Forward: TPD52.F12
Reverse: TPD52.R11
Exon
Length: 141
Transcript: TPD52.gAug05
Exon
Length: 116
Transcript: TPD52.gAug05
Exon
Length: 149
Transcript: TPD52.gAug05
Exon
Length: 102
Transcript: TPD52.gAug05
Exon
Length: 49
Transcript: TPD52.gAug05
Exon
Length: 557
Transcript: TPD52.gAug05
Intron
Length: 106831
Transcript: TPD52.gAug05
Intron
Length: 11047
Transcript: TPD52.gAug05
Intron
Length: 1653
Transcript: TPD52.gAug05
Intron
Length: 8858
Transcript: TPD52.gAug05
Intron
Length: 4391
Transcript: TPD52.gAug05
Exon
Length: 297
Transcript: TPD52.hAug05
Exon
Length: 41
Transcript: TPD52.hAug05
Exon
Length: 11
Transcript: TPD52.hAug05
Exon
Length: 149
Transcript: TPD52.hAug05
Exon
Length: 70
Transcript: TPD52.hAug05
Exon
Length: 102
Transcript: TPD52.hAug05
Exon
Length: 49
Transcript: TPD52.hAug05
Exon
Length: 1645
Transcript: TPD52.hAug05
Intron
Length: 15721
Transcript: TPD52.hAug05
Intron
Length: 64
Transcript: TPD52.hAug05
Intron
Length: 11047
Transcript: TPD52.hAug05
Intron
Length: 606
Transcript: TPD52.hAug05
Intron
Length: 977
Transcript: TPD52.hAug05
Intron
Length: 8858
Transcript: TPD52.hAug05
Intron
Length: 4384
Transcript: TPD52.hAug05
Exon
Length: 116
Transcript: TPD52.iAug05
Exon
Length: 149
Transcript: TPD52.iAug05
Exon
Length: 102
Transcript: TPD52.iAug05
Exon
Length: 53
Transcript: TPD52.iAug05
Exon
Length: 1607
Transcript: TPD52.iAug05
Intron
Length: 11047
Transcript: TPD52.iAug05
Intron
Length: 1653
Transcript: TPD52.iAug05
Intron
Length: 8858
Transcript: TPD52.iAug05
Intron
Length: 4387
Transcript: TPD52.iAug05
Exon
Length: 199
Transcript: TPD52.jAug05
Exon
Length: 15
Transcript: TPD52.jAug05
Exon
Length: 149
Transcript: TPD52.jAug05
Exon
Length: 102
Transcript: TPD52.jAug05
Exon
Length: 53
Transcript: TPD52.jAug05
Intron
Length: 15721
Transcript: TPD52.jAug05
Intron
Length: 11148
Transcript: TPD52.jAug05
Intron
Length: 1653
Transcript: TPD52.jAug05
Intron
Length: 8858
Transcript: TPD52.jAug05
Exon
Length: 149
Transcript: TPD52.kAug05
Exon
Length: 116
Transcript: TPD52.kAug05
Exon
Length: 149
Transcript: TPD52.kAug05
Exon
Length: 70
Transcript: TPD52.kAug05
Exon
Length: 102
Transcript: TPD52.kAug05
Exon
Length: 27
Transcript: TPD52.kAug05
Exon
Length: 42
Transcript: TPD52.kAug05
Exon
Length: 49
Transcript: TPD52.kAug05
Exon
Length: 19
Transcript: TPD52.kAug05
Intron
Length: 106831
Transcript: TPD52.kAug05
Intron
Length: 11047
Transcript: TPD52.kAug05
Intron
Length: 606
Transcript: TPD52.kAug05
Intron
Length: 977
Transcript: TPD52.kAug05
Intron
Length: 1055
Transcript: TPD52.kAug05
Intron
Length: 6236
Transcript: TPD52.kAug05
Intron
Length: 1498
Transcript: TPD52.kAug05
Intron
Length: 4384
Transcript: TPD52.kAug05
Reaction
Expected peak: 270
Associated peak: 260,261,282
Repeated 51 time
Molarity: 0.06M
Forward: TPD52.F12
Reverse: TPD52.R11
Exon
Length: 119
Transcript: TPD52.lAug05
Exon
Length: 116
Transcript: TPD52.lAug05
Exon
Length: 149
Transcript: TPD52.lAug05
Exon
Length: 70
Transcript: TPD52.lAug05
Exon
Length: 102
Transcript: TPD52.lAug05
Exon
Length: 26
Transcript: TPD52.lAug05
Intron
Length: 106831
Transcript: TPD52.lAug05
Intron
Length: 11047
Transcript: TPD52.lAug05
Intron
Length: 606
Transcript: TPD52.lAug05
Intron
Length: 977
Transcript: TPD52.lAug05
Intron
Length: 8858
Transcript: TPD52.lAug05
Exon
Length: 116
Transcript: TPD52.mAug05
Exon
Length: 149
Transcript: TPD52.mAug05
Exon
Length: 167
Transcript: TPD52.mAug05
Intron
Length: 11047
Transcript: TPD52.mAug05
Intron
Length: 1653
Transcript: TPD52.mAug05
Exon
Length: 75
Transcript: TPD52.nAug05
Exon
Length: 381
Transcript: TPD52.nAug05
Intron
Length: 11047
Transcript: TPD52.nAug05
Exon
Length: 89
Transcript: TPD52.oAug05
Exon
Length: 49
Transcript: TPD52.oAug05
Exon
Length: 116
Transcript: TPD52.oAug05
Exon
Length: 1119
Transcript: TPD52.oAug05
Intron
Length: 21809
Transcript: TPD52.oAug05
Intron
Length: 4384
Transcript: TPD52.oAug05
Intron
Length: 4276
Transcript: TPD52.oAug05
Exon
Length: 292
Transcript: TPD52.pAug05
Exon
Length: 288
Transcript: TPD52.pAug05
Intron
Length: 4384
Transcript: TPD52.pAug05
Exon
Length: 49
Transcript: TPD52.qAug05
Exon
Length: 70
Transcript: TPD52.qAug05
Exon
Length: 102
Transcript: TPD52.qAug05
Exon
Length: 126
Transcript: TPD52.qAug05
Exon
Length: 42
Transcript: TPD52.qAug05
Exon
Length: 47
Transcript: TPD52.qAug05
Intron
Length: 606
Transcript: TPD52.qAug05
Intron
Length: 977
Transcript: TPD52.qAug05
Intron
Length: 1055
Transcript: TPD52.qAug05
Intron
Length: 6137
Transcript: TPD52.qAug05
Intron
Length: 1498
Transcript: TPD52.qAug05
Reaction
Expected peak: 369
Associated peak: None
Repeated 51 time
Molarity: 0.00M
Forward: TPD52.F12
Reverse: TPD52.R11
Exon
Length: 309
Transcript: TPD52.rAug05
Exon
Length: 49
Transcript: TPD52.rAug05
Exon
Length: 302
Transcript: TPD52.rAug05
Intron
Length: 8858
Transcript: TPD52.rAug05
Intron
Length: 4384
Transcript: TPD52.rAug05
Exon
Length: 137
Transcript: TPD52.sAug05
Exon
Length: 49
Transcript: TPD52.sAug05
Exon
Length: 559
Transcript: TPD52.sAug05
Intron
Length: 8583
Transcript: TPD52.sAug05
Intron
Length: 4384
Transcript: TPD52.sAug05
Exon
Length: 478
Transcript: TPD52.shed1.aAug05
Exon
Length: 357
Transcript: TPD52.shed2.aAug05
Exon
Length: 180
Transcript: TPD52.tAug05
Exon
Length: 149
Transcript: TPD52.tAug05
Exon
Length: 102
Transcript: TPD52.tAug05
Exon
Length: 49
Transcript: TPD52.tAug05
Exon
Length: 300
Transcript: TPD52.tAug05
Intron
Length: 11047
Transcript: TPD52.tAug05
Intron
Length: 1653
Transcript: TPD52.tAug05
Intron
Length: 8858
Transcript: TPD52.tAug05
Intron
Length: 4384
Transcript: TPD52.tAug05
TPD52.R11
AATTGAATGCTGAATGGAACG
TPD52.F12
AACAGAACATTGCCAAAGGG

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