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Identification of alternative splicing markers for breast cancer
2. Breast Validation Screen
Transcript map
: ALOX5
Exon
Length: 249
Transcript: ALOX5.aAug05
Length: 249
Transcript: ALOX5.aAug05
Exon
Length: 199
Transcript: ALOX5.aAug05
Length: 199
Transcript: ALOX5.aAug05
Exon
Length: 82
Transcript: ALOX5.aAug05
Length: 82
Transcript: ALOX5.aAug05
Exon
Length: 123
Transcript: ALOX5.aAug05
Length: 123
Transcript: ALOX5.aAug05
Exon
Length: 107
Transcript: ALOX5.aAug05
Length: 107
Transcript: ALOX5.aAug05
Exon
Length: 173
Transcript: ALOX5.aAug05
Length: 173
Transcript: ALOX5.aAug05
Exon
Length: 147
Transcript: ALOX5.aAug05
Length: 147
Transcript: ALOX5.aAug05
Exon
Length: 204
Transcript: ALOX5.aAug05
Length: 204
Transcript: ALOX5.aAug05
Exon
Length: 87
Transcript: ALOX5.aAug05
Length: 87
Transcript: ALOX5.aAug05
Exon
Length: 179
Transcript: ALOX5.aAug05
Length: 179
Transcript: ALOX5.aAug05
Exon
Length: 122
Transcript: ALOX5.aAug05
Length: 122
Transcript: ALOX5.aAug05
Exon
Length: 101
Transcript: ALOX5.aAug05
Length: 101
Transcript: ALOX5.aAug05
Exon
Length: 171
Transcript: ALOX5.aAug05
Length: 171
Transcript: ALOX5.aAug05
Exon
Length: 612
Transcript: ALOX5.aAug05
Length: 612
Transcript: ALOX5.aAug05
Intron
Length: 8053
Transcript: ALOX5.aAug05
Length: 8053
Transcript: ALOX5.aAug05
Intron
Length: 13173
Transcript: ALOX5.aAug05
Length: 13173
Transcript: ALOX5.aAug05
Intron
Length: 16254
Transcript: ALOX5.aAug05
Length: 16254
Transcript: ALOX5.aAug05
Intron
Length: 11727
Transcript: ALOX5.aAug05
Length: 11727
Transcript: ALOX5.aAug05
Intron
Length: 812
Transcript: ALOX5.aAug05
Length: 812
Transcript: ALOX5.aAug05
Intron
Length: 3485
Transcript: ALOX5.aAug05
Length: 3485
Transcript: ALOX5.aAug05
Intron
Length: 11665
Transcript: ALOX5.aAug05
Length: 11665
Transcript: ALOX5.aAug05
Intron
Length: 710
Transcript: ALOX5.aAug05
Length: 710
Transcript: ALOX5.aAug05
Intron
Length: 1607
Transcript: ALOX5.aAug05
Length: 1607
Transcript: ALOX5.aAug05
Intron
Length: 199
Transcript: ALOX5.aAug05
Length: 199
Transcript: ALOX5.aAug05
Intron
Length: 190
Transcript: ALOX5.aAug05
Length: 190
Transcript: ALOX5.aAug05
Intron
Length: 287
Transcript: ALOX5.aAug05
Length: 287
Transcript: ALOX5.aAug05
Intron
Length: 1221
Transcript: ALOX5.aAug05
Length: 1221
Transcript: ALOX5.aAug05
Reaction
Expected peak: 304
Associated peak: 318,319,320,321,322,323,324,326
Repeated 51 time
Molarity: 4.78M
Forward: ALOX5.F16
Reverse: ALOX5.R7
Expected peak: 304
Associated peak: 318,319,320,321,322,323,324,326
Repeated 51 time
Molarity: 4.78M
Forward: ALOX5.F16
Reverse: ALOX5.R7
Exon
Length: 254
Transcript: ALOX5.bAug05
Length: 254
Transcript: ALOX5.bAug05
Exon
Length: 199
Transcript: ALOX5.bAug05
Length: 199
Transcript: ALOX5.bAug05
Exon
Length: 2259
Transcript: ALOX5.bAug05
Length: 2259
Transcript: ALOX5.bAug05
Exon
Length: 109
Transcript: ALOX5.bAug05
Length: 109
Transcript: ALOX5.bAug05
Exon
Length: 123
Transcript: ALOX5.bAug05
Length: 123
Transcript: ALOX5.bAug05
Exon
Length: 107
Transcript: ALOX5.bAug05
Length: 107
Transcript: ALOX5.bAug05
Exon
Length: 173
Transcript: ALOX5.bAug05
Length: 173
Transcript: ALOX5.bAug05
Exon
Length: 147
Transcript: ALOX5.bAug05
Length: 147
Transcript: ALOX5.bAug05
Exon
Length: 204
Transcript: ALOX5.bAug05
Length: 204
Transcript: ALOX5.bAug05
Exon
Length: 287
Transcript: ALOX5.bAug05
Length: 287
Transcript: ALOX5.bAug05
Exon
Length: 500
Transcript: ALOX5.bAug05
Length: 500
Transcript: ALOX5.bAug05
Exon
Length: 101
Transcript: ALOX5.bAug05
Length: 101
Transcript: ALOX5.bAug05
Exon
Length: 117
Transcript: ALOX5.bAug05
Length: 117
Transcript: ALOX5.bAug05
Intron
Length: 8053
Transcript: ALOX5.bAug05
Length: 8053
Transcript: ALOX5.bAug05
Intron
Length: 6820
Transcript: ALOX5.bAug05
Length: 6820
Transcript: ALOX5.bAug05
Intron
Length: 15655
Transcript: ALOX5.bAug05
Length: 15655
Transcript: ALOX5.bAug05
Intron
Length: 4666
Transcript: ALOX5.bAug05
Length: 4666
Transcript: ALOX5.bAug05
Intron
Length: 11727
Transcript: ALOX5.bAug05
Length: 11727
Transcript: ALOX5.bAug05
Intron
Length: 812
Transcript: ALOX5.bAug05
Length: 812
Transcript: ALOX5.bAug05
Intron
Length: 3485
Transcript: ALOX5.bAug05
Length: 3485
Transcript: ALOX5.bAug05
Intron
Length: 11665
Transcript: ALOX5.bAug05
Length: 11665
Transcript: ALOX5.bAug05
Intron
Length: 710
Transcript: ALOX5.bAug05
Length: 710
Transcript: ALOX5.bAug05
Intron
Length: 1407
Transcript: ALOX5.bAug05
Length: 1407
Transcript: ALOX5.bAug05
Intron
Length: 190
Transcript: ALOX5.bAug05
Length: 190
Transcript: ALOX5.bAug05
Intron
Length: 287
Transcript: ALOX5.bAug05
Length: 287
Transcript: ALOX5.bAug05
Reaction
Expected peak: 504
Associated peak: None
Repeated 51 time
Molarity: 0.00M
Forward: ALOX5.F16
Reverse: ALOX5.R7
Expected peak: 504
Associated peak: None
Repeated 51 time
Molarity: 0.00M
Forward: ALOX5.F16
Reverse: ALOX5.R7
Exon
Length: 202
Transcript: ALOX5.cAug05
Length: 202
Transcript: ALOX5.cAug05
Exon
Length: 199
Transcript: ALOX5.cAug05
Length: 199
Transcript: ALOX5.cAug05
Exon
Length: 82
Transcript: ALOX5.cAug05
Length: 82
Transcript: ALOX5.cAug05
Exon
Length: 107
Transcript: ALOX5.cAug05
Length: 107
Transcript: ALOX5.cAug05
Exon
Length: 173
Transcript: ALOX5.cAug05
Length: 173
Transcript: ALOX5.cAug05
Exon
Length: 146
Transcript: ALOX5.cAug05
Length: 146
Transcript: ALOX5.cAug05
Intron
Length: 8053
Transcript: ALOX5.cAug05
Length: 8053
Transcript: ALOX5.cAug05
Intron
Length: 13173
Transcript: ALOX5.cAug05
Length: 13173
Transcript: ALOX5.cAug05
Intron
Length: 28104
Transcript: ALOX5.cAug05
Length: 28104
Transcript: ALOX5.cAug05
Intron
Length: 812
Transcript: ALOX5.cAug05
Length: 812
Transcript: ALOX5.cAug05
Intron
Length: 3485
Transcript: ALOX5.cAug05
Length: 3485
Transcript: ALOX5.cAug05
Exon
Length: 241
Transcript: ALOX5.dAug05
Length: 241
Transcript: ALOX5.dAug05
Exon
Length: 199
Transcript: ALOX5.dAug05
Length: 199
Transcript: ALOX5.dAug05
Exon
Length: 82
Transcript: ALOX5.dAug05
Length: 82
Transcript: ALOX5.dAug05
Exon
Length: 123
Transcript: ALOX5.dAug05
Length: 123
Transcript: ALOX5.dAug05
Exon
Length: 107
Transcript: ALOX5.dAug05
Length: 107
Transcript: ALOX5.dAug05
Exon
Length: 460
Transcript: ALOX5.dAug05
Length: 460
Transcript: ALOX5.dAug05
Intron
Length: 8015
Transcript: ALOX5.dAug05
Length: 8015
Transcript: ALOX5.dAug05
Intron
Length: 13173
Transcript: ALOX5.dAug05
Length: 13173
Transcript: ALOX5.dAug05
Intron
Length: 16254
Transcript: ALOX5.dAug05
Length: 16254
Transcript: ALOX5.dAug05
Intron
Length: 11727
Transcript: ALOX5.dAug05
Length: 11727
Transcript: ALOX5.dAug05
Intron
Length: 812
Transcript: ALOX5.dAug05
Length: 812
Transcript: ALOX5.dAug05
Exon
Length: 100
Transcript: ALOX5.eAug05
Length: 100
Transcript: ALOX5.eAug05
Exon
Length: 87
Transcript: ALOX5.eAug05
Length: 87
Transcript: ALOX5.eAug05
Exon
Length: 92
Transcript: ALOX5.eAug05
Length: 92
Transcript: ALOX5.eAug05
Exon
Length: 122
Transcript: ALOX5.eAug05
Length: 122
Transcript: ALOX5.eAug05
Exon
Length: 101
Transcript: ALOX5.eAug05
Length: 101
Transcript: ALOX5.eAug05
Exon
Length: 1530
Transcript: ALOX5.eAug05
Length: 1530
Transcript: ALOX5.eAug05
Intron
Length: 710
Transcript: ALOX5.eAug05
Length: 710
Transcript: ALOX5.eAug05
Intron
Length: 1694
Transcript: ALOX5.eAug05
Length: 1694
Transcript: ALOX5.eAug05
Intron
Length: 199
Transcript: ALOX5.eAug05
Length: 199
Transcript: ALOX5.eAug05
Intron
Length: 190
Transcript: ALOX5.eAug05
Length: 190
Transcript: ALOX5.eAug05
Intron
Length: 287
Transcript: ALOX5.eAug05
Length: 287
Transcript: ALOX5.eAug05
Reaction
Expected peak: 217
Associated peak: 226,233,234,235
Repeated 51 time
Molarity: 1.64M
Forward: ALOX5.F16
Reverse: ALOX5.R7
Expected peak: 217
Associated peak: 226,233,234,235
Repeated 51 time
Molarity: 1.64M
Forward: ALOX5.F16
Reverse: ALOX5.R7
Exon
Length: 122
Transcript: ALOX5.fAug05
Length: 122
Transcript: ALOX5.fAug05
Exon
Length: 506
Transcript: ALOX5.fAug05
Length: 506
Transcript: ALOX5.fAug05
Intron
Length: 190
Transcript: ALOX5.fAug05
Length: 190
Transcript: ALOX5.fAug05
Exon
Length: 57
Transcript: ALOX5.gAug05
Length: 57
Transcript: ALOX5.gAug05
Exon
Length: 173
Transcript: ALOX5.gAug05
Length: 173
Transcript: ALOX5.gAug05
Exon
Length: 457
Transcript: ALOX5.gAug05
Length: 457
Transcript: ALOX5.gAug05
Intron
Length: 812
Transcript: ALOX5.gAug05
Length: 812
Transcript: ALOX5.gAug05
Intron
Length: 3228
Transcript: ALOX5.gAug05
Length: 3228
Transcript: ALOX5.gAug05
Exon
Length: 629
Transcript: ALOX5.shed1.aAug05
Length: 629
Transcript: ALOX5.shed1.aAug05
Exon
Length: 618
Transcript: ALOX5.shed2.aAug05
Length: 618
Transcript: ALOX5.shed2.aAug05
ALOX5.F16
AGACCATCACCCACCTTCTG
AGACCATCACCCACCTTCTG
ALOX5.R7
TCTTCTTTGCTCTCCATGCC
TCTTCTTTGCTCTCCATGCC