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LGFUS Public Data
Identification of alternative splicing markers for breast cancer
2. Breast Validation Screen
Transcript map
: GATA3
Exon
Length: 188
Transcript: GATA3.aAug05
Length: 188
Transcript: GATA3.aAug05
Exon
Length: 610
Transcript: GATA3.aAug05
Length: 610
Transcript: GATA3.aAug05
Exon
Length: 537
Transcript: GATA3.aAug05
Length: 537
Transcript: GATA3.aAug05
Exon
Length: 146
Transcript: GATA3.aAug05
Length: 146
Transcript: GATA3.aAug05
Exon
Length: 126
Transcript: GATA3.aAug05
Length: 126
Transcript: GATA3.aAug05
Exon
Length: 1463
Transcript: GATA3.aAug05
Length: 1463
Transcript: GATA3.aAug05
Intron
Length: 395
Transcript: GATA3.aAug05
Length: 395
Transcript: GATA3.aAug05
Intron
Length: 2408
Transcript: GATA3.aAug05
Length: 2408
Transcript: GATA3.aAug05
Intron
Length: 5151
Transcript: GATA3.aAug05
Length: 5151
Transcript: GATA3.aAug05
Intron
Length: 5334
Transcript: GATA3.aAug05
Length: 5334
Transcript: GATA3.aAug05
Intron
Length: 4140
Transcript: GATA3.aAug05
Length: 4140
Transcript: GATA3.aAug05
Reaction
Expected peak: 420
Associated peak: 444,445,446,447,448,449,450,452,453,454,455,457,458,477,483
Repeated 51 time
Molarity: 29.91M
Forward: GATA3.F2
Reverse: GATA3.R5
Expected peak: 420
Associated peak: 444,445,446,447,448,449,450,452,453,454,455,457,458,477,483
Repeated 51 time
Molarity: 29.91M
Forward: GATA3.F2
Reverse: GATA3.R5
Exon
Length: 204
Transcript: GATA3.bAug05
Length: 204
Transcript: GATA3.bAug05
Exon
Length: 610
Transcript: GATA3.bAug05
Length: 610
Transcript: GATA3.bAug05
Exon
Length: 537
Transcript: GATA3.bAug05
Length: 537
Transcript: GATA3.bAug05
Exon
Length: 143
Transcript: GATA3.bAug05
Length: 143
Transcript: GATA3.bAug05
Exon
Length: 126
Transcript: GATA3.bAug05
Length: 126
Transcript: GATA3.bAug05
Exon
Length: 1559
Transcript: GATA3.bAug05
Length: 1559
Transcript: GATA3.bAug05
Intron
Length: 395
Transcript: GATA3.bAug05
Length: 395
Transcript: GATA3.bAug05
Intron
Length: 2408
Transcript: GATA3.bAug05
Length: 2408
Transcript: GATA3.bAug05
Intron
Length: 5154
Transcript: GATA3.bAug05
Length: 5154
Transcript: GATA3.bAug05
Intron
Length: 5334
Transcript: GATA3.bAug05
Length: 5334
Transcript: GATA3.bAug05
Intron
Length: 4140
Transcript: GATA3.bAug05
Length: 4140
Transcript: GATA3.bAug05
Reaction
Expected peak: 417
Associated peak: 444,445,446,447,448,449,450,452,453,454,455,457,458,477,483
Repeated 51 time
Molarity: 29.91M
Forward: GATA3.F2
Reverse: GATA3.R5
Expected peak: 417
Associated peak: 444,445,446,447,448,449,450,452,453,454,455,457,458,477,483
Repeated 51 time
Molarity: 29.91M
Forward: GATA3.F2
Reverse: GATA3.R5
Exon
Length: 175
Transcript: GATA3.cAug05
Length: 175
Transcript: GATA3.cAug05
Exon
Length: 610
Transcript: GATA3.cAug05
Length: 610
Transcript: GATA3.cAug05
Exon
Length: 537
Transcript: GATA3.cAug05
Length: 537
Transcript: GATA3.cAug05
Exon
Length: 126
Transcript: GATA3.cAug05
Length: 126
Transcript: GATA3.cAug05
Exon
Length: 234
Transcript: GATA3.cAug05
Length: 234
Transcript: GATA3.cAug05
Intron
Length: 1508
Transcript: GATA3.cAug05
Length: 1508
Transcript: GATA3.cAug05
Intron
Length: 2408
Transcript: GATA3.cAug05
Length: 2408
Transcript: GATA3.cAug05
Intron
Length: 10631
Transcript: GATA3.cAug05
Length: 10631
Transcript: GATA3.cAug05
Intron
Length: 4140
Transcript: GATA3.cAug05
Length: 4140
Transcript: GATA3.cAug05
Reaction
Expected peak: 274
Associated peak: 266,267,269,271,273,278,279,281,282,284,285
Repeated 51 time
Molarity: 0.92M
Forward: GATA3.F2
Reverse: GATA3.R5
Expected peak: 274
Associated peak: 266,267,269,271,273,278,279,281,282,284,285
Repeated 51 time
Molarity: 0.92M
Forward: GATA3.F2
Reverse: GATA3.R5
GATA3.R5
AAGTCCTCCAGTGAGTCATGC
AAGTCCTCCAGTGAGTCATGC
GATA3.F2
CTTCGGATGCAAGTCCAGG
CTTCGGATGCAAGTCCAGG