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LGFUS Public Data
Identification of alternative splicing markers for breast cancer
2. Breast Validation Screen
Gene primer pair list
: Primer pairs
Transcript map
: SLC22A18
Exon
Length: 299
Transcript: SLC22A18.aAug05
Length: 299
Transcript: SLC22A18.aAug05
Exon
Length: 276
Transcript: SLC22A18.aAug05
Length: 276
Transcript: SLC22A18.aAug05
Exon
Length: 98
Transcript: SLC22A18.aAug05
Length: 98
Transcript: SLC22A18.aAug05
Exon
Length: 161
Transcript: SLC22A18.aAug05
Length: 161
Transcript: SLC22A18.aAug05
Exon
Length: 133
Transcript: SLC22A18.aAug05
Length: 133
Transcript: SLC22A18.aAug05
Exon
Length: 119
Transcript: SLC22A18.aAug05
Length: 119
Transcript: SLC22A18.aAug05
Exon
Length: 108
Transcript: SLC22A18.aAug05
Length: 108
Transcript: SLC22A18.aAug05
Exon
Length: 101
Transcript: SLC22A18.aAug05
Length: 101
Transcript: SLC22A18.aAug05
Exon
Length: 102
Transcript: SLC22A18.aAug05
Length: 102
Transcript: SLC22A18.aAug05
Exon
Length: 121
Transcript: SLC22A18.aAug05
Length: 121
Transcript: SLC22A18.aAug05
Exon
Length: 236
Transcript: SLC22A18.aAug05
Length: 236
Transcript: SLC22A18.aAug05
Intron
Length: 495
Transcript: SLC22A18.aAug05
Length: 495
Transcript: SLC22A18.aAug05
Intron
Length: 4743
Transcript: SLC22A18.aAug05
Length: 4743
Transcript: SLC22A18.aAug05
Intron
Length: 865
Transcript: SLC22A18.aAug05
Length: 865
Transcript: SLC22A18.aAug05
Intron
Length: 221
Transcript: SLC22A18.aAug05
Length: 221
Transcript: SLC22A18.aAug05
Intron
Length: 6911
Transcript: SLC22A18.aAug05
Length: 6911
Transcript: SLC22A18.aAug05
Intron
Length: 1247
Transcript: SLC22A18.aAug05
Length: 1247
Transcript: SLC22A18.aAug05
Intron
Length: 1211
Transcript: SLC22A18.aAug05
Length: 1211
Transcript: SLC22A18.aAug05
Intron
Length: 2694
Transcript: SLC22A18.aAug05
Length: 2694
Transcript: SLC22A18.aAug05
Intron
Length: 232
Transcript: SLC22A18.aAug05
Length: 232
Transcript: SLC22A18.aAug05
Intron
Length: 2453
Transcript: SLC22A18.aAug05
Length: 2453
Transcript: SLC22A18.aAug05
Reaction
Expected peak: 395
Associated peak: 417,418,419,420,421,422,423,424,425,426
Repeated 51 time
Molarity: 19.58M
Forward: SLC22A18.F1
Reverse: SLC22A18.R10
Expected peak: 395
Associated peak: 417,418,419,420,421,422,423,424,425,426
Repeated 51 time
Molarity: 19.58M
Forward: SLC22A18.F1
Reverse: SLC22A18.R10
Exon
Length: 86
Transcript: SLC22A18.bAug05
Length: 86
Transcript: SLC22A18.bAug05
Exon
Length: 276
Transcript: SLC22A18.bAug05
Length: 276
Transcript: SLC22A18.bAug05
Exon
Length: 98
Transcript: SLC22A18.bAug05
Length: 98
Transcript: SLC22A18.bAug05
Exon
Length: 161
Transcript: SLC22A18.bAug05
Length: 161
Transcript: SLC22A18.bAug05
Exon
Length: 133
Transcript: SLC22A18.bAug05
Length: 133
Transcript: SLC22A18.bAug05
Exon
Length: 119
Transcript: SLC22A18.bAug05
Length: 119
Transcript: SLC22A18.bAug05
Exon
Length: 108
Transcript: SLC22A18.bAug05
Length: 108
Transcript: SLC22A18.bAug05
Exon
Length: 101
Transcript: SLC22A18.bAug05
Length: 101
Transcript: SLC22A18.bAug05
Exon
Length: 102
Transcript: SLC22A18.bAug05
Length: 102
Transcript: SLC22A18.bAug05
Exon
Length: 121
Transcript: SLC22A18.bAug05
Length: 121
Transcript: SLC22A18.bAug05
Exon
Length: 236
Transcript: SLC22A18.bAug05
Length: 236
Transcript: SLC22A18.bAug05
Intron
Length: 3407
Transcript: SLC22A18.bAug05
Length: 3407
Transcript: SLC22A18.bAug05
Intron
Length: 4743
Transcript: SLC22A18.bAug05
Length: 4743
Transcript: SLC22A18.bAug05
Intron
Length: 865
Transcript: SLC22A18.bAug05
Length: 865
Transcript: SLC22A18.bAug05
Intron
Length: 221
Transcript: SLC22A18.bAug05
Length: 221
Transcript: SLC22A18.bAug05
Intron
Length: 6911
Transcript: SLC22A18.bAug05
Length: 6911
Transcript: SLC22A18.bAug05
Intron
Length: 1247
Transcript: SLC22A18.bAug05
Length: 1247
Transcript: SLC22A18.bAug05
Intron
Length: 1211
Transcript: SLC22A18.bAug05
Length: 1211
Transcript: SLC22A18.bAug05
Intron
Length: 2694
Transcript: SLC22A18.bAug05
Length: 2694
Transcript: SLC22A18.bAug05
Intron
Length: 232
Transcript: SLC22A18.bAug05
Length: 232
Transcript: SLC22A18.bAug05
Intron
Length: 2453
Transcript: SLC22A18.bAug05
Length: 2453
Transcript: SLC22A18.bAug05
Reaction
Expected peak: 395
Associated peak: 417,418,419,420,421,422,423,424,425,426
Repeated 51 time
Molarity: 19.58M
Forward: SLC22A18.F1
Reverse: SLC22A18.R10
Expected peak: 395
Associated peak: 417,418,419,420,421,422,423,424,425,426
Repeated 51 time
Molarity: 19.58M
Forward: SLC22A18.F1
Reverse: SLC22A18.R10
Exon
Length: 83
Transcript: SLC22A18.cAug05
Length: 83
Transcript: SLC22A18.cAug05
Exon
Length: 276
Transcript: SLC22A18.cAug05
Length: 276
Transcript: SLC22A18.cAug05
Exon
Length: 98
Transcript: SLC22A18.cAug05
Length: 98
Transcript: SLC22A18.cAug05
Exon
Length: 161
Transcript: SLC22A18.cAug05
Length: 161
Transcript: SLC22A18.cAug05
Exon
Length: 133
Transcript: SLC22A18.cAug05
Length: 133
Transcript: SLC22A18.cAug05
Exon
Length: 119
Transcript: SLC22A18.cAug05
Length: 119
Transcript: SLC22A18.cAug05
Exon
Length: 108
Transcript: SLC22A18.cAug05
Length: 108
Transcript: SLC22A18.cAug05
Exon
Length: 101
Transcript: SLC22A18.cAug05
Length: 101
Transcript: SLC22A18.cAug05
Exon
Length: 102
Transcript: SLC22A18.cAug05
Length: 102
Transcript: SLC22A18.cAug05
Exon
Length: 121
Transcript: SLC22A18.cAug05
Length: 121
Transcript: SLC22A18.cAug05
Exon
Length: 238
Transcript: SLC22A18.cAug05
Length: 238
Transcript: SLC22A18.cAug05
Intron
Length: 849
Transcript: SLC22A18.cAug05
Length: 849
Transcript: SLC22A18.cAug05
Intron
Length: 4743
Transcript: SLC22A18.cAug05
Length: 4743
Transcript: SLC22A18.cAug05
Intron
Length: 865
Transcript: SLC22A18.cAug05
Length: 865
Transcript: SLC22A18.cAug05
Intron
Length: 221
Transcript: SLC22A18.cAug05
Length: 221
Transcript: SLC22A18.cAug05
Intron
Length: 6911
Transcript: SLC22A18.cAug05
Length: 6911
Transcript: SLC22A18.cAug05
Intron
Length: 1247
Transcript: SLC22A18.cAug05
Length: 1247
Transcript: SLC22A18.cAug05
Intron
Length: 1211
Transcript: SLC22A18.cAug05
Length: 1211
Transcript: SLC22A18.cAug05
Intron
Length: 2694
Transcript: SLC22A18.cAug05
Length: 2694
Transcript: SLC22A18.cAug05
Intron
Length: 232
Transcript: SLC22A18.cAug05
Length: 232
Transcript: SLC22A18.cAug05
Intron
Length: 2453
Transcript: SLC22A18.cAug05
Length: 2453
Transcript: SLC22A18.cAug05
Reaction
Expected peak: 395
Associated peak: 417,418,419,420,421,422,423,424,425,426
Repeated 51 time
Molarity: 19.58M
Forward: SLC22A18.F1
Reverse: SLC22A18.R10
Expected peak: 395
Associated peak: 417,418,419,420,421,422,423,424,425,426
Repeated 51 time
Molarity: 19.58M
Forward: SLC22A18.F1
Reverse: SLC22A18.R10
Exon
Length: 82
Transcript: SLC22A18.dAug05
Length: 82
Transcript: SLC22A18.dAug05
Exon
Length: 276
Transcript: SLC22A18.dAug05
Length: 276
Transcript: SLC22A18.dAug05
Exon
Length: 98
Transcript: SLC22A18.dAug05
Length: 98
Transcript: SLC22A18.dAug05
Exon
Length: 119
Transcript: SLC22A18.dAug05
Length: 119
Transcript: SLC22A18.dAug05
Exon
Length: 108
Transcript: SLC22A18.dAug05
Length: 108
Transcript: SLC22A18.dAug05
Exon
Length: 101
Transcript: SLC22A18.dAug05
Length: 101
Transcript: SLC22A18.dAug05
Exon
Length: 102
Transcript: SLC22A18.dAug05
Length: 102
Transcript: SLC22A18.dAug05
Exon
Length: 121
Transcript: SLC22A18.dAug05
Length: 121
Transcript: SLC22A18.dAug05
Exon
Length: 218
Transcript: SLC22A18.dAug05
Length: 218
Transcript: SLC22A18.dAug05
Intron
Length: 849
Transcript: SLC22A18.dAug05
Length: 849
Transcript: SLC22A18.dAug05
Intron
Length: 4743
Transcript: SLC22A18.dAug05
Length: 4743
Transcript: SLC22A18.dAug05
Intron
Length: 8291
Transcript: SLC22A18.dAug05
Length: 8291
Transcript: SLC22A18.dAug05
Intron
Length: 1247
Transcript: SLC22A18.dAug05
Length: 1247
Transcript: SLC22A18.dAug05
Intron
Length: 1211
Transcript: SLC22A18.dAug05
Length: 1211
Transcript: SLC22A18.dAug05
Intron
Length: 2694
Transcript: SLC22A18.dAug05
Length: 2694
Transcript: SLC22A18.dAug05
Intron
Length: 232
Transcript: SLC22A18.dAug05
Length: 232
Transcript: SLC22A18.dAug05
Intron
Length: 2453
Transcript: SLC22A18.dAug05
Length: 2453
Transcript: SLC22A18.dAug05
Exon
Length: 68
Transcript: SLC22A18.eAug05
Length: 68
Transcript: SLC22A18.eAug05
Exon
Length: 276
Transcript: SLC22A18.eAug05
Length: 276
Transcript: SLC22A18.eAug05
Exon
Length: 98
Transcript: SLC22A18.eAug05
Length: 98
Transcript: SLC22A18.eAug05
Exon
Length: 161
Transcript: SLC22A18.eAug05
Length: 161
Transcript: SLC22A18.eAug05
Exon
Length: 119
Transcript: SLC22A18.eAug05
Length: 119
Transcript: SLC22A18.eAug05
Exon
Length: 108
Transcript: SLC22A18.eAug05
Length: 108
Transcript: SLC22A18.eAug05
Exon
Length: 101
Transcript: SLC22A18.eAug05
Length: 101
Transcript: SLC22A18.eAug05
Exon
Length: 510
Transcript: SLC22A18.eAug05
Length: 510
Transcript: SLC22A18.eAug05
Intron
Length: 849
Transcript: SLC22A18.eAug05
Length: 849
Transcript: SLC22A18.eAug05
Intron
Length: 4743
Transcript: SLC22A18.eAug05
Length: 4743
Transcript: SLC22A18.eAug05
Intron
Length: 865
Transcript: SLC22A18.eAug05
Length: 865
Transcript: SLC22A18.eAug05
Intron
Length: 7265
Transcript: SLC22A18.eAug05
Length: 7265
Transcript: SLC22A18.eAug05
Intron
Length: 1247
Transcript: SLC22A18.eAug05
Length: 1247
Transcript: SLC22A18.eAug05
Intron
Length: 1211
Transcript: SLC22A18.eAug05
Length: 1211
Transcript: SLC22A18.eAug05
Intron
Length: 1944
Transcript: SLC22A18.eAug05
Length: 1944
Transcript: SLC22A18.eAug05
Reaction
Expected peak: 262
Associated peak: 272,273
Repeated 51 time
Molarity: 2.05M
Forward: SLC22A18.F1
Reverse: SLC22A18.R10
Expected peak: 262
Associated peak: 272,273
Repeated 51 time
Molarity: 2.05M
Forward: SLC22A18.F1
Reverse: SLC22A18.R10
Exon
Length: 376
Transcript: SLC22A18.fAug05
Length: 376
Transcript: SLC22A18.fAug05
Exon
Length: 98
Transcript: SLC22A18.fAug05
Length: 98
Transcript: SLC22A18.fAug05
Exon
Length: 161
Transcript: SLC22A18.fAug05
Length: 161
Transcript: SLC22A18.fAug05
Exon
Length: 133
Transcript: SLC22A18.fAug05
Length: 133
Transcript: SLC22A18.fAug05
Exon
Length: 532
Transcript: SLC22A18.fAug05
Length: 532
Transcript: SLC22A18.fAug05
Exon
Length: 108
Transcript: SLC22A18.fAug05
Length: 108
Transcript: SLC22A18.fAug05
Exon
Length: 101
Transcript: SLC22A18.fAug05
Length: 101
Transcript: SLC22A18.fAug05
Exon
Length: 102
Transcript: SLC22A18.fAug05
Length: 102
Transcript: SLC22A18.fAug05
Exon
Length: 121
Transcript: SLC22A18.fAug05
Length: 121
Transcript: SLC22A18.fAug05
Exon
Length: 93
Transcript: SLC22A18.fAug05
Length: 93
Transcript: SLC22A18.fAug05
Intron
Length: 4743
Transcript: SLC22A18.fAug05
Length: 4743
Transcript: SLC22A18.fAug05
Intron
Length: 865
Transcript: SLC22A18.fAug05
Length: 865
Transcript: SLC22A18.fAug05
Intron
Length: 221
Transcript: SLC22A18.fAug05
Length: 221
Transcript: SLC22A18.fAug05
Intron
Length: 6498
Transcript: SLC22A18.fAug05
Length: 6498
Transcript: SLC22A18.fAug05
Intron
Length: 1247
Transcript: SLC22A18.fAug05
Length: 1247
Transcript: SLC22A18.fAug05
Intron
Length: 1211
Transcript: SLC22A18.fAug05
Length: 1211
Transcript: SLC22A18.fAug05
Intron
Length: 2694
Transcript: SLC22A18.fAug05
Length: 2694
Transcript: SLC22A18.fAug05
Intron
Length: 232
Transcript: SLC22A18.fAug05
Length: 232
Transcript: SLC22A18.fAug05
Intron
Length: 2453
Transcript: SLC22A18.fAug05
Length: 2453
Transcript: SLC22A18.fAug05
Reaction
Expected peak: 808
Associated peak: None
Repeated 51 time
Molarity: 0.00M
Forward: SLC22A18.F1
Reverse: SLC22A18.R10
Expected peak: 808
Associated peak: None
Repeated 51 time
Molarity: 0.00M
Forward: SLC22A18.F1
Reverse: SLC22A18.R10
Exon
Length: 80
Transcript: SLC22A18.gAug05
Length: 80
Transcript: SLC22A18.gAug05
Exon
Length: 276
Transcript: SLC22A18.gAug05
Length: 276
Transcript: SLC22A18.gAug05
Exon
Length: 98
Transcript: SLC22A18.gAug05
Length: 98
Transcript: SLC22A18.gAug05
Exon
Length: 119
Transcript: SLC22A18.gAug05
Length: 119
Transcript: SLC22A18.gAug05
Exon
Length: 108
Transcript: SLC22A18.gAug05
Length: 108
Transcript: SLC22A18.gAug05
Exon
Length: 101
Transcript: SLC22A18.gAug05
Length: 101
Transcript: SLC22A18.gAug05
Intron
Length: 3407
Transcript: SLC22A18.gAug05
Length: 3407
Transcript: SLC22A18.gAug05
Intron
Length: 4743
Transcript: SLC22A18.gAug05
Length: 4743
Transcript: SLC22A18.gAug05
Intron
Length: 8291
Transcript: SLC22A18.gAug05
Length: 8291
Transcript: SLC22A18.gAug05
Intron
Length: 1247
Transcript: SLC22A18.gAug05
Length: 1247
Transcript: SLC22A18.gAug05
Intron
Length: 1211
Transcript: SLC22A18.gAug05
Length: 1211
Transcript: SLC22A18.gAug05
Exon
Length: 669
Transcript: SLC22A18.hAug05
Length: 669
Transcript: SLC22A18.hAug05
Exon
Length: 108
Transcript: SLC22A18.hAug05
Length: 108
Transcript: SLC22A18.hAug05
Exon
Length: 1924
Transcript: SLC22A18.hAug05
Length: 1924
Transcript: SLC22A18.hAug05
Intron
Length: 1247
Transcript: SLC22A18.hAug05
Length: 1247
Transcript: SLC22A18.hAug05
Intron
Length: 1211
Transcript: SLC22A18.hAug05
Length: 1211
Transcript: SLC22A18.hAug05
Exon
Length: 84
Transcript: SLC22A18.iAug05
Length: 84
Transcript: SLC22A18.iAug05
Exon
Length: 276
Transcript: SLC22A18.iAug05
Length: 276
Transcript: SLC22A18.iAug05
Exon
Length: 98
Transcript: SLC22A18.iAug05
Length: 98
Transcript: SLC22A18.iAug05
Exon
Length: 77
Transcript: SLC22A18.iAug05
Length: 77
Transcript: SLC22A18.iAug05
Exon
Length: 121
Transcript: SLC22A18.iAug05
Length: 121
Transcript: SLC22A18.iAug05
Exon
Length: 94
Transcript: SLC22A18.iAug05
Length: 94
Transcript: SLC22A18.iAug05
Intron
Length: 3407
Transcript: SLC22A18.iAug05
Length: 3407
Transcript: SLC22A18.iAug05
Intron
Length: 4743
Transcript: SLC22A18.iAug05
Length: 4743
Transcript: SLC22A18.iAug05
Intron
Length: 865
Transcript: SLC22A18.iAug05
Length: 865
Transcript: SLC22A18.iAug05
Intron
Length: 13163
Transcript: SLC22A18.iAug05
Length: 13163
Transcript: SLC22A18.iAug05
Intron
Length: 2453
Transcript: SLC22A18.iAug05
Length: 2453
Transcript: SLC22A18.iAug05
Exon
Length: 76
Transcript: SLC22A18.jAug05
Length: 76
Transcript: SLC22A18.jAug05
Exon
Length: 108
Transcript: SLC22A18.jAug05
Length: 108
Transcript: SLC22A18.jAug05
Exon
Length: 101
Transcript: SLC22A18.jAug05
Length: 101
Transcript: SLC22A18.jAug05
Exon
Length: 102
Transcript: SLC22A18.jAug05
Length: 102
Transcript: SLC22A18.jAug05
Exon
Length: 121
Transcript: SLC22A18.jAug05
Length: 121
Transcript: SLC22A18.jAug05
Exon
Length: 174
Transcript: SLC22A18.jAug05
Length: 174
Transcript: SLC22A18.jAug05
Intron
Length: 964
Transcript: SLC22A18.jAug05
Length: 964
Transcript: SLC22A18.jAug05
Intron
Length: 1211
Transcript: SLC22A18.jAug05
Length: 1211
Transcript: SLC22A18.jAug05
Intron
Length: 2694
Transcript: SLC22A18.jAug05
Length: 2694
Transcript: SLC22A18.jAug05
Intron
Length: 232
Transcript: SLC22A18.jAug05
Length: 232
Transcript: SLC22A18.jAug05
Intron
Length: 2453
Transcript: SLC22A18.jAug05
Length: 2453
Transcript: SLC22A18.jAug05
Exon
Length: 59
Transcript: SLC22A18.kAug05
Length: 59
Transcript: SLC22A18.kAug05
Exon
Length: 108
Transcript: SLC22A18.kAug05
Length: 108
Transcript: SLC22A18.kAug05
Exon
Length: 103
Transcript: SLC22A18.kAug05
Length: 103
Transcript: SLC22A18.kAug05
Exon
Length: 101
Transcript: SLC22A18.kAug05
Length: 101
Transcript: SLC22A18.kAug05
Exon
Length: 102
Transcript: SLC22A18.kAug05
Length: 102
Transcript: SLC22A18.kAug05
Exon
Length: 121
Transcript: SLC22A18.kAug05
Length: 121
Transcript: SLC22A18.kAug05
Exon
Length: 237
Transcript: SLC22A18.kAug05
Length: 237
Transcript: SLC22A18.kAug05
Intron
Length: 1247
Transcript: SLC22A18.kAug05
Length: 1247
Transcript: SLC22A18.kAug05
Intron
Length: 810
Transcript: SLC22A18.kAug05
Length: 810
Transcript: SLC22A18.kAug05
Intron
Length: 298
Transcript: SLC22A18.kAug05
Length: 298
Transcript: SLC22A18.kAug05
Intron
Length: 2694
Transcript: SLC22A18.kAug05
Length: 2694
Transcript: SLC22A18.kAug05
Intron
Length: 232
Transcript: SLC22A18.kAug05
Length: 232
Transcript: SLC22A18.kAug05
Intron
Length: 2453
Transcript: SLC22A18.kAug05
Length: 2453
Transcript: SLC22A18.kAug05
Exon
Length: 242
Transcript: SLC22A18.lAug05
Length: 242
Transcript: SLC22A18.lAug05
Exon
Length: 121
Transcript: SLC22A18.lAug05
Length: 121
Transcript: SLC22A18.lAug05
Exon
Length: 231
Transcript: SLC22A18.lAug05
Length: 231
Transcript: SLC22A18.lAug05
Intron
Length: 232
Transcript: SLC22A18.lAug05
Length: 232
Transcript: SLC22A18.lAug05
Intron
Length: 2453
Transcript: SLC22A18.lAug05
Length: 2453
Transcript: SLC22A18.lAug05
Exon
Length: 79
Transcript: SLC22A18.mAug05
Length: 79
Transcript: SLC22A18.mAug05
Exon
Length: 241
Transcript: SLC22A18.mAug05
Length: 241
Transcript: SLC22A18.mAug05
Intron
Length: 221
Transcript: SLC22A18.mAug05
Length: 221
Transcript: SLC22A18.mAug05
Exon
Length: 583
Transcript: SLC22A18.shed1.aAug05
Length: 583
Transcript: SLC22A18.shed1.aAug05
SLC22A18.R10
CACCTTCACCAGGAAGATCCT
CACCTTCACCAGGAAGATCCT
SLC22A18.F1
TCTACCTGCTCTTCGCCTCG
TCTACCTGCTCTTCGCCTCG