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Identification of alternative splicing markers for breast cancer
2. Breast Validation Screen
Transcript map
: GAS6
Exon
Length: 271
Transcript: GAS6.aAug05
Length: 271
Transcript: GAS6.aAug05
Exon
Length: 167
Transcript: GAS6.aAug05
Length: 167
Transcript: GAS6.aAug05
Exon
Length: 25
Transcript: GAS6.aAug05
Length: 25
Transcript: GAS6.aAug05
Exon
Length: 63
Transcript: GAS6.aAug05
Length: 63
Transcript: GAS6.aAug05
Exon
Length: 123
Transcript: GAS6.aAug05
Length: 123
Transcript: GAS6.aAug05
Exon
Length: 123
Transcript: GAS6.aAug05
Length: 123
Transcript: GAS6.aAug05
Exon
Length: 123
Transcript: GAS6.aAug05
Length: 123
Transcript: GAS6.aAug05
Exon
Length: 122
Transcript: GAS6.aAug05
Length: 122
Transcript: GAS6.aAug05
Exon
Length: 119
Transcript: GAS6.aAug05
Length: 119
Transcript: GAS6.aAug05
Exon
Length: 190
Transcript: GAS6.aAug05
Length: 190
Transcript: GAS6.aAug05
Exon
Length: 165
Transcript: GAS6.aAug05
Length: 165
Transcript: GAS6.aAug05
Exon
Length: 169
Transcript: GAS6.aAug05
Length: 169
Transcript: GAS6.aAug05
Exon
Length: 176
Transcript: GAS6.aAug05
Length: 176
Transcript: GAS6.aAug05
Exon
Length: 229
Transcript: GAS6.aAug05
Length: 229
Transcript: GAS6.aAug05
Exon
Length: 1382
Transcript: GAS6.aAug05
Length: 1382
Transcript: GAS6.aAug05
Intron
Length: 91
Transcript: GAS6.aAug05
Length: 91
Transcript: GAS6.aAug05
Intron
Length: 15524
Transcript: GAS6.aAug05
Length: 15524
Transcript: GAS6.aAug05
Intron
Length: 1436
Transcript: GAS6.aAug05
Length: 1436
Transcript: GAS6.aAug05
Intron
Length: 6676
Transcript: GAS6.aAug05
Length: 6676
Transcript: GAS6.aAug05
Intron
Length: 1536
Transcript: GAS6.aAug05
Length: 1536
Transcript: GAS6.aAug05
Intron
Length: 2433
Transcript: GAS6.aAug05
Length: 2433
Transcript: GAS6.aAug05
Intron
Length: 840
Transcript: GAS6.aAug05
Length: 840
Transcript: GAS6.aAug05
Intron
Length: 1798
Transcript: GAS6.aAug05
Length: 1798
Transcript: GAS6.aAug05
Intron
Length: 145
Transcript: GAS6.aAug05
Length: 145
Transcript: GAS6.aAug05
Intron
Length: 3587
Transcript: GAS6.aAug05
Length: 3587
Transcript: GAS6.aAug05
Intron
Length: 1382
Transcript: GAS6.aAug05
Length: 1382
Transcript: GAS6.aAug05
Intron
Length: 3445
Transcript: GAS6.aAug05
Length: 3445
Transcript: GAS6.aAug05
Intron
Length: 1188
Transcript: GAS6.aAug05
Length: 1188
Transcript: GAS6.aAug05
Intron
Length: 939
Transcript: GAS6.aAug05
Length: 939
Transcript: GAS6.aAug05
Exon
Length: 708
Transcript: GAS6.bAug05
Length: 708
Transcript: GAS6.bAug05
Exon
Length: 1140
Transcript: GAS6.bAug05
Length: 1140
Transcript: GAS6.bAug05
Exon
Length: 63
Transcript: GAS6.bAug05
Length: 63
Transcript: GAS6.bAug05
Exon
Length: 123
Transcript: GAS6.bAug05
Length: 123
Transcript: GAS6.bAug05
Exon
Length: 123
Transcript: GAS6.bAug05
Length: 123
Transcript: GAS6.bAug05
Exon
Length: 123
Transcript: GAS6.bAug05
Length: 123
Transcript: GAS6.bAug05
Exon
Length: 122
Transcript: GAS6.bAug05
Length: 122
Transcript: GAS6.bAug05
Exon
Length: 119
Transcript: GAS6.bAug05
Length: 119
Transcript: GAS6.bAug05
Exon
Length: 190
Transcript: GAS6.bAug05
Length: 190
Transcript: GAS6.bAug05
Exon
Length: 165
Transcript: GAS6.bAug05
Length: 165
Transcript: GAS6.bAug05
Exon
Length: 169
Transcript: GAS6.bAug05
Length: 169
Transcript: GAS6.bAug05
Exon
Length: 176
Transcript: GAS6.bAug05
Length: 176
Transcript: GAS6.bAug05
Exon
Length: 229
Transcript: GAS6.bAug05
Length: 229
Transcript: GAS6.bAug05
Exon
Length: 458
Transcript: GAS6.bAug05
Length: 458
Transcript: GAS6.bAug05
Intron
Length: 2483
Transcript: GAS6.bAug05
Length: 2483
Transcript: GAS6.bAug05
Intron
Length: 376
Transcript: GAS6.bAug05
Length: 376
Transcript: GAS6.bAug05
Intron
Length: 6676
Transcript: GAS6.bAug05
Length: 6676
Transcript: GAS6.bAug05
Intron
Length: 1536
Transcript: GAS6.bAug05
Length: 1536
Transcript: GAS6.bAug05
Intron
Length: 2433
Transcript: GAS6.bAug05
Length: 2433
Transcript: GAS6.bAug05
Intron
Length: 840
Transcript: GAS6.bAug05
Length: 840
Transcript: GAS6.bAug05
Intron
Length: 1798
Transcript: GAS6.bAug05
Length: 1798
Transcript: GAS6.bAug05
Intron
Length: 145
Transcript: GAS6.bAug05
Length: 145
Transcript: GAS6.bAug05
Intron
Length: 3587
Transcript: GAS6.bAug05
Length: 3587
Transcript: GAS6.bAug05
Intron
Length: 1382
Transcript: GAS6.bAug05
Length: 1382
Transcript: GAS6.bAug05
Intron
Length: 3445
Transcript: GAS6.bAug05
Length: 3445
Transcript: GAS6.bAug05
Intron
Length: 1188
Transcript: GAS6.bAug05
Length: 1188
Transcript: GAS6.bAug05
Intron
Length: 939
Transcript: GAS6.bAug05
Length: 939
Transcript: GAS6.bAug05
Reaction
Expected peak: 214
Associated peak: 215,216,228,229,230
Repeated 51 time
Molarity: 10.10M
Forward: GAS6.F9
Reverse: GAS6.R12
Expected peak: 214
Associated peak: 215,216,228,229,230
Repeated 51 time
Molarity: 10.10M
Forward: GAS6.F9
Reverse: GAS6.R12
Exon
Length: 247
Transcript: GAS6.cAug05
Length: 247
Transcript: GAS6.cAug05
Exon
Length: 167
Transcript: GAS6.cAug05
Length: 167
Transcript: GAS6.cAug05
Exon
Length: 25
Transcript: GAS6.cAug05
Length: 25
Transcript: GAS6.cAug05
Exon
Length: 63
Transcript: GAS6.cAug05
Length: 63
Transcript: GAS6.cAug05
Exon
Length: 123
Transcript: GAS6.cAug05
Length: 123
Transcript: GAS6.cAug05
Exon
Length: 123
Transcript: GAS6.cAug05
Length: 123
Transcript: GAS6.cAug05
Exon
Length: 117
Transcript: GAS6.cAug05
Length: 117
Transcript: GAS6.cAug05
Exon
Length: 122
Transcript: GAS6.cAug05
Length: 122
Transcript: GAS6.cAug05
Exon
Length: 119
Transcript: GAS6.cAug05
Length: 119
Transcript: GAS6.cAug05
Exon
Length: 190
Transcript: GAS6.cAug05
Length: 190
Transcript: GAS6.cAug05
Exon
Length: 165
Transcript: GAS6.cAug05
Length: 165
Transcript: GAS6.cAug05
Exon
Length: 169
Transcript: GAS6.cAug05
Length: 169
Transcript: GAS6.cAug05
Exon
Length: 176
Transcript: GAS6.cAug05
Length: 176
Transcript: GAS6.cAug05
Exon
Length: 468
Transcript: GAS6.cAug05
Length: 468
Transcript: GAS6.cAug05
Intron
Length: 91
Transcript: GAS6.cAug05
Length: 91
Transcript: GAS6.cAug05
Intron
Length: 15524
Transcript: GAS6.cAug05
Length: 15524
Transcript: GAS6.cAug05
Intron
Length: 1436
Transcript: GAS6.cAug05
Length: 1436
Transcript: GAS6.cAug05
Intron
Length: 6676
Transcript: GAS6.cAug05
Length: 6676
Transcript: GAS6.cAug05
Intron
Length: 1536
Transcript: GAS6.cAug05
Length: 1536
Transcript: GAS6.cAug05
Intron
Length: 2439
Transcript: GAS6.cAug05
Length: 2439
Transcript: GAS6.cAug05
Intron
Length: 840
Transcript: GAS6.cAug05
Length: 840
Transcript: GAS6.cAug05
Intron
Length: 1798
Transcript: GAS6.cAug05
Length: 1798
Transcript: GAS6.cAug05
Intron
Length: 145
Transcript: GAS6.cAug05
Length: 145
Transcript: GAS6.cAug05
Intron
Length: 3587
Transcript: GAS6.cAug05
Length: 3587
Transcript: GAS6.cAug05
Intron
Length: 1382
Transcript: GAS6.cAug05
Length: 1382
Transcript: GAS6.cAug05
Intron
Length: 3445
Transcript: GAS6.cAug05
Length: 3445
Transcript: GAS6.cAug05
Intron
Length: 2356
Transcript: GAS6.cAug05
Length: 2356
Transcript: GAS6.cAug05
Exon
Length: 12
Transcript: GAS6.dAug05
Length: 12
Transcript: GAS6.dAug05
Exon
Length: 102
Transcript: GAS6.dAug05
Length: 102
Transcript: GAS6.dAug05
Exon
Length: 123
Transcript: GAS6.dAug05
Length: 123
Transcript: GAS6.dAug05
Exon
Length: 123
Transcript: GAS6.dAug05
Length: 123
Transcript: GAS6.dAug05
Exon
Length: 123
Transcript: GAS6.dAug05
Length: 123
Transcript: GAS6.dAug05
Exon
Length: 122
Transcript: GAS6.dAug05
Length: 122
Transcript: GAS6.dAug05
Exon
Length: 92
Transcript: GAS6.dAug05
Length: 92
Transcript: GAS6.dAug05
Exon
Length: 73
Transcript: GAS6.dAug05
Length: 73
Transcript: GAS6.dAug05
Exon
Length: 165
Transcript: GAS6.dAug05
Length: 165
Transcript: GAS6.dAug05
Exon
Length: 169
Transcript: GAS6.dAug05
Length: 169
Transcript: GAS6.dAug05
Exon
Length: 176
Transcript: GAS6.dAug05
Length: 176
Transcript: GAS6.dAug05
Exon
Length: 284
Transcript: GAS6.dAug05
Length: 284
Transcript: GAS6.dAug05
Intron
Length: 156
Transcript: GAS6.dAug05
Length: 156
Transcript: GAS6.dAug05
Intron
Length: 23724
Transcript: GAS6.dAug05
Length: 23724
Transcript: GAS6.dAug05
Intron
Length: 1536
Transcript: GAS6.dAug05
Length: 1536
Transcript: GAS6.dAug05
Intron
Length: 2433
Transcript: GAS6.dAug05
Length: 2433
Transcript: GAS6.dAug05
Intron
Length: 840
Transcript: GAS6.dAug05
Length: 840
Transcript: GAS6.dAug05
Intron
Length: 1798
Transcript: GAS6.dAug05
Length: 1798
Transcript: GAS6.dAug05
Intron
Length: 289
Transcript: GAS6.dAug05
Length: 289
Transcript: GAS6.dAug05
Intron
Length: 3587
Transcript: GAS6.dAug05
Length: 3587
Transcript: GAS6.dAug05
Intron
Length: 1382
Transcript: GAS6.dAug05
Length: 1382
Transcript: GAS6.dAug05
Intron
Length: 3445
Transcript: GAS6.dAug05
Length: 3445
Transcript: GAS6.dAug05
Intron
Length: 1188
Transcript: GAS6.dAug05
Length: 1188
Transcript: GAS6.dAug05
Exon
Length: 770
Transcript: GAS6.eAug05
Length: 770
Transcript: GAS6.eAug05
Exon
Length: 122
Transcript: GAS6.eAug05
Length: 122
Transcript: GAS6.eAug05
Exon
Length: 119
Transcript: GAS6.eAug05
Length: 119
Transcript: GAS6.eAug05
Exon
Length: 190
Transcript: GAS6.eAug05
Length: 190
Transcript: GAS6.eAug05
Exon
Length: 165
Transcript: GAS6.eAug05
Length: 165
Transcript: GAS6.eAug05
Exon
Length: 169
Transcript: GAS6.eAug05
Length: 169
Transcript: GAS6.eAug05
Exon
Length: 176
Transcript: GAS6.eAug05
Length: 176
Transcript: GAS6.eAug05
Exon
Length: 229
Transcript: GAS6.eAug05
Length: 229
Transcript: GAS6.eAug05
Exon
Length: 467
Transcript: GAS6.eAug05
Length: 467
Transcript: GAS6.eAug05
Intron
Length: 840
Transcript: GAS6.eAug05
Length: 840
Transcript: GAS6.eAug05
Intron
Length: 1798
Transcript: GAS6.eAug05
Length: 1798
Transcript: GAS6.eAug05
Intron
Length: 145
Transcript: GAS6.eAug05
Length: 145
Transcript: GAS6.eAug05
Intron
Length: 3587
Transcript: GAS6.eAug05
Length: 3587
Transcript: GAS6.eAug05
Intron
Length: 1382
Transcript: GAS6.eAug05
Length: 1382
Transcript: GAS6.eAug05
Intron
Length: 3445
Transcript: GAS6.eAug05
Length: 3445
Transcript: GAS6.eAug05
Intron
Length: 1188
Transcript: GAS6.eAug05
Length: 1188
Transcript: GAS6.eAug05
Intron
Length: 939
Transcript: GAS6.eAug05
Length: 939
Transcript: GAS6.eAug05
Exon
Length: 1108
Transcript: GAS6.fAug05
Length: 1108
Transcript: GAS6.fAug05
Exon
Length: 190
Transcript: GAS6.fAug05
Length: 190
Transcript: GAS6.fAug05
Exon
Length: 165
Transcript: GAS6.fAug05
Length: 165
Transcript: GAS6.fAug05
Exon
Length: 169
Transcript: GAS6.fAug05
Length: 169
Transcript: GAS6.fAug05
Exon
Length: 176
Transcript: GAS6.fAug05
Length: 176
Transcript: GAS6.fAug05
Exon
Length: 229
Transcript: GAS6.fAug05
Length: 229
Transcript: GAS6.fAug05
Exon
Length: 469
Transcript: GAS6.fAug05
Length: 469
Transcript: GAS6.fAug05
Intron
Length: 145
Transcript: GAS6.fAug05
Length: 145
Transcript: GAS6.fAug05
Intron
Length: 3587
Transcript: GAS6.fAug05
Length: 3587
Transcript: GAS6.fAug05
Intron
Length: 1382
Transcript: GAS6.fAug05
Length: 1382
Transcript: GAS6.fAug05
Intron
Length: 3445
Transcript: GAS6.fAug05
Length: 3445
Transcript: GAS6.fAug05
Intron
Length: 1188
Transcript: GAS6.fAug05
Length: 1188
Transcript: GAS6.fAug05
Intron
Length: 939
Transcript: GAS6.fAug05
Length: 939
Transcript: GAS6.fAug05
Exon
Length: 231
Transcript: GAS6.gAug05
Length: 231
Transcript: GAS6.gAug05
Exon
Length: 167
Transcript: GAS6.gAug05
Length: 167
Transcript: GAS6.gAug05
Exon
Length: 25
Transcript: GAS6.gAug05
Length: 25
Transcript: GAS6.gAug05
Exon
Length: 63
Transcript: GAS6.gAug05
Length: 63
Transcript: GAS6.gAug05
Exon
Length: 123
Transcript: GAS6.gAug05
Length: 123
Transcript: GAS6.gAug05
Exon
Length: 123
Transcript: GAS6.gAug05
Length: 123
Transcript: GAS6.gAug05
Exon
Length: 122
Transcript: GAS6.gAug05
Length: 122
Transcript: GAS6.gAug05
Exon
Length: 119
Transcript: GAS6.gAug05
Length: 119
Transcript: GAS6.gAug05
Exon
Length: 165
Transcript: GAS6.gAug05
Length: 165
Transcript: GAS6.gAug05
Exon
Length: 169
Transcript: GAS6.gAug05
Length: 169
Transcript: GAS6.gAug05
Exon
Length: 211
Transcript: GAS6.gAug05
Length: 211
Transcript: GAS6.gAug05
Intron
Length: 91
Transcript: GAS6.gAug05
Length: 91
Transcript: GAS6.gAug05
Intron
Length: 15524
Transcript: GAS6.gAug05
Length: 15524
Transcript: GAS6.gAug05
Intron
Length: 1436
Transcript: GAS6.gAug05
Length: 1436
Transcript: GAS6.gAug05
Intron
Length: 8335
Transcript: GAS6.gAug05
Length: 8335
Transcript: GAS6.gAug05
Intron
Length: 2433
Transcript: GAS6.gAug05
Length: 2433
Transcript: GAS6.gAug05
Intron
Length: 840
Transcript: GAS6.gAug05
Length: 840
Transcript: GAS6.gAug05
Intron
Length: 1798
Transcript: GAS6.gAug05
Length: 1798
Transcript: GAS6.gAug05
Intron
Length: 3922
Transcript: GAS6.gAug05
Length: 3922
Transcript: GAS6.gAug05
Intron
Length: 1382
Transcript: GAS6.gAug05
Length: 1382
Transcript: GAS6.gAug05
Intron
Length: 3445
Transcript: GAS6.gAug05
Length: 3445
Transcript: GAS6.gAug05
Exon
Length: 88
Transcript: GAS6.hAug05
Length: 88
Transcript: GAS6.hAug05
Exon
Length: 167
Transcript: GAS6.hAug05
Length: 167
Transcript: GAS6.hAug05
Exon
Length: 25
Transcript: GAS6.hAug05
Length: 25
Transcript: GAS6.hAug05
Exon
Length: 42
Transcript: GAS6.hAug05
Length: 42
Transcript: GAS6.hAug05
Exon
Length: 290
Transcript: GAS6.hAug05
Length: 290
Transcript: GAS6.hAug05
Intron
Length: 91
Transcript: GAS6.hAug05
Length: 91
Transcript: GAS6.hAug05
Intron
Length: 15524
Transcript: GAS6.hAug05
Length: 15524
Transcript: GAS6.hAug05
Intron
Length: 1436
Transcript: GAS6.hAug05
Length: 1436
Transcript: GAS6.hAug05
Intron
Length: 25704
Transcript: GAS6.hAug05
Length: 25704
Transcript: GAS6.hAug05
Exon
Length: 183
Transcript: GAS6.iAug05
Length: 183
Transcript: GAS6.iAug05
Exon
Length: 167
Transcript: GAS6.iAug05
Length: 167
Transcript: GAS6.iAug05
Exon
Length: 25
Transcript: GAS6.iAug05
Length: 25
Transcript: GAS6.iAug05
Exon
Length: 163
Transcript: GAS6.iAug05
Length: 163
Transcript: GAS6.iAug05
Intron
Length: 91
Transcript: GAS6.iAug05
Length: 91
Transcript: GAS6.iAug05
Intron
Length: 15524
Transcript: GAS6.iAug05
Length: 15524
Transcript: GAS6.iAug05
Intron
Length: 187
Transcript: GAS6.iAug05
Length: 187
Transcript: GAS6.iAug05
Exon
Length: 36
Transcript: GAS6.jAug05
Length: 36
Transcript: GAS6.jAug05
Exon
Length: 167
Transcript: GAS6.jAug05
Length: 167
Transcript: GAS6.jAug05
Exon
Length: 203
Transcript: GAS6.jAug05
Length: 203
Transcript: GAS6.jAug05
Exon
Length: 126
Transcript: GAS6.jAug05
Length: 126
Transcript: GAS6.jAug05
Intron
Length: 1188
Transcript: GAS6.jAug05
Length: 1188
Transcript: GAS6.jAug05
Intron
Length: 1071
Transcript: GAS6.jAug05
Length: 1071
Transcript: GAS6.jAug05
Intron
Length: 71
Transcript: GAS6.jAug05
Length: 71
Transcript: GAS6.jAug05
Exon
Length: 40
Transcript: GAS6.kAug05
Length: 40
Transcript: GAS6.kAug05
Exon
Length: 44
Transcript: GAS6.kAug05
Length: 44
Transcript: GAS6.kAug05
Exon
Length: 470
Transcript: GAS6.kAug05
Length: 470
Transcript: GAS6.kAug05
Intron
Length: 40
Transcript: GAS6.kAug05
Length: 40
Transcript: GAS6.kAug05
Intron
Length: 939
Transcript: GAS6.kAug05
Length: 939
Transcript: GAS6.kAug05
Exon
Length: 645
Transcript: GAS6.lAug05
Length: 645
Transcript: GAS6.lAug05
Exon
Length: 123
Transcript: GAS6.lAug05
Length: 123
Transcript: GAS6.lAug05
Exon
Length: 123
Transcript: GAS6.lAug05
Length: 123
Transcript: GAS6.lAug05
Intron
Length: 6676
Transcript: GAS6.lAug05
Length: 6676
Transcript: GAS6.lAug05
Intron
Length: 1536
Transcript: GAS6.lAug05
Length: 1536
Transcript: GAS6.lAug05
Reaction
Expected peak: 590
Associated peak: 573,575,606,607,609,610,612,613,615,616,617,618,619,620,623
Repeated 51 time
Molarity: 11.12M
Forward: GAS6.F9
Reverse: GAS6.R12
Expected peak: 590
Associated peak: 573,575,606,607,609,610,612,613,615,616,617,618,619,620,623
Repeated 51 time
Molarity: 11.12M
Forward: GAS6.F9
Reverse: GAS6.R12
Exon
Length: 2646
Transcript: GAS6.shed1.aAug05
Length: 2646
Transcript: GAS6.shed1.aAug05
Exon
Length: 201
Transcript: GAS6.shed2.aAug05
Length: 201
Transcript: GAS6.shed2.aAug05
Exon
Length: 687
Transcript: GAS6.shed3.aAug05
Length: 687
Transcript: GAS6.shed3.aAug05
Exon
Length: 2262
Transcript: GAS6.shed4.aAug05
Length: 2262
Transcript: GAS6.shed4.aAug05
Exon
Length: 342
Transcript: GAS6.shed5.aAug05
Length: 342
Transcript: GAS6.shed5.aAug05
GAS6.F9
GATGTCTGCTGTCAAGCTGTGT
GATGTCTGCTGTCAAGCTGTGT
GAS6.R12
AAGTTGCCCATGAGGTCCTG
AAGTTGCCCATGAGGTCCTG