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LGFUS Public Data
Identification of alternative splicing markers for breast cancer
2. Breast Validation Screen
Transcript map
: CASC4
Exon
Length: 626
Transcript: CASC4.aAug05
Length: 626
Transcript: CASC4.aAug05
Exon
Length: 55
Transcript: CASC4.aAug05
Length: 55
Transcript: CASC4.aAug05
Exon
Length: 103
Transcript: CASC4.aAug05
Length: 103
Transcript: CASC4.aAug05
Exon
Length: 91
Transcript: CASC4.aAug05
Length: 91
Transcript: CASC4.aAug05
Exon
Length: 145
Transcript: CASC4.aAug05
Length: 145
Transcript: CASC4.aAug05
Exon
Length: 81
Transcript: CASC4.aAug05
Length: 81
Transcript: CASC4.aAug05
Exon
Length: 99
Transcript: CASC4.aAug05
Length: 99
Transcript: CASC4.aAug05
Exon
Length: 171
Transcript: CASC4.aAug05
Length: 171
Transcript: CASC4.aAug05
Exon
Length: 168
Transcript: CASC4.aAug05
Length: 168
Transcript: CASC4.aAug05
Exon
Length: 2426
Transcript: CASC4.aAug05
Length: 2426
Transcript: CASC4.aAug05
Intron
Length: 33608
Transcript: CASC4.aAug05
Length: 33608
Transcript: CASC4.aAug05
Intron
Length: 5665
Transcript: CASC4.aAug05
Length: 5665
Transcript: CASC4.aAug05
Intron
Length: 3200
Transcript: CASC4.aAug05
Length: 3200
Transcript: CASC4.aAug05
Intron
Length: 5684
Transcript: CASC4.aAug05
Length: 5684
Transcript: CASC4.aAug05
Intron
Length: 329
Transcript: CASC4.aAug05
Length: 329
Transcript: CASC4.aAug05
Intron
Length: 41372
Transcript: CASC4.aAug05
Length: 41372
Transcript: CASC4.aAug05
Intron
Length: 1017
Transcript: CASC4.aAug05
Length: 1017
Transcript: CASC4.aAug05
Intron
Length: 21910
Transcript: CASC4.aAug05
Length: 21910
Transcript: CASC4.aAug05
Intron
Length: 10281
Transcript: CASC4.aAug05
Length: 10281
Transcript: CASC4.aAug05
Reaction
Expected peak: 295
Associated peak: 295,296,297,298,299
Repeated 51 time
Molarity: 12.13M
Forward: CASC4.F1
Reverse: NM_177974-R1
Expected peak: 295
Associated peak: 295,296,297,298,299
Repeated 51 time
Molarity: 12.13M
Forward: CASC4.F1
Reverse: NM_177974-R1
Reaction
Expected peak: 576
Associated peak: None
Repeated 51 time
Molarity: 0.00M
Forward: CASC4.F1
Reverse: CASC4.R1
Expected peak: 576
Associated peak: None
Repeated 51 time
Molarity: 0.00M
Forward: CASC4.F1
Reverse: CASC4.R1
Exon
Length: 626
Transcript: CASC4.bAug05
Length: 626
Transcript: CASC4.bAug05
Exon
Length: 55
Transcript: CASC4.bAug05
Length: 55
Transcript: CASC4.bAug05
Exon
Length: 103
Transcript: CASC4.bAug05
Length: 103
Transcript: CASC4.bAug05
Exon
Length: 91
Transcript: CASC4.bAug05
Length: 91
Transcript: CASC4.bAug05
Exon
Length: 145
Transcript: CASC4.bAug05
Length: 145
Transcript: CASC4.bAug05
Exon
Length: 81
Transcript: CASC4.bAug05
Length: 81
Transcript: CASC4.bAug05
Exon
Length: 99
Transcript: CASC4.bAug05
Length: 99
Transcript: CASC4.bAug05
Exon
Length: 171
Transcript: CASC4.bAug05
Length: 171
Transcript: CASC4.bAug05
Exon
Length: 2422
Transcript: CASC4.bAug05
Length: 2422
Transcript: CASC4.bAug05
Intron
Length: 33608
Transcript: CASC4.bAug05
Length: 33608
Transcript: CASC4.bAug05
Intron
Length: 5665
Transcript: CASC4.bAug05
Length: 5665
Transcript: CASC4.bAug05
Intron
Length: 3200
Transcript: CASC4.bAug05
Length: 3200
Transcript: CASC4.bAug05
Intron
Length: 5684
Transcript: CASC4.bAug05
Length: 5684
Transcript: CASC4.bAug05
Intron
Length: 329
Transcript: CASC4.bAug05
Length: 329
Transcript: CASC4.bAug05
Intron
Length: 41372
Transcript: CASC4.bAug05
Length: 41372
Transcript: CASC4.bAug05
Intron
Length: 1017
Transcript: CASC4.bAug05
Length: 1017
Transcript: CASC4.bAug05
Intron
Length: 32359
Transcript: CASC4.bAug05
Length: 32359
Transcript: CASC4.bAug05
Reaction
Expected peak: 127
Associated peak: 131,132,133,134,135,136
Repeated 51 time
Molarity: 27.03M
Forward: CASC4.F1
Reverse: NM_177974-R1
Expected peak: 127
Associated peak: 131,132,133,134,135,136
Repeated 51 time
Molarity: 27.03M
Forward: CASC4.F1
Reverse: NM_177974-R1
Reaction
Expected peak: 576
Associated peak: None
Repeated 51 time
Molarity: 0.00M
Forward: CASC4.F1
Reverse: CASC4.R1
Expected peak: 576
Associated peak: None
Repeated 51 time
Molarity: 0.00M
Forward: CASC4.F1
Reverse: CASC4.R1
Exon
Length: 264
Transcript: CASC4.cAug05
Length: 264
Transcript: CASC4.cAug05
Exon
Length: 55
Transcript: CASC4.cAug05
Length: 55
Transcript: CASC4.cAug05
Exon
Length: 103
Transcript: CASC4.cAug05
Length: 103
Transcript: CASC4.cAug05
Exon
Length: 91
Transcript: CASC4.cAug05
Length: 91
Transcript: CASC4.cAug05
Exon
Length: 145
Transcript: CASC4.cAug05
Length: 145
Transcript: CASC4.cAug05
Exon
Length: 152
Transcript: CASC4.cAug05
Length: 152
Transcript: CASC4.cAug05
Intron
Length: 33608
Transcript: CASC4.cAug05
Length: 33608
Transcript: CASC4.cAug05
Intron
Length: 5665
Transcript: CASC4.cAug05
Length: 5665
Transcript: CASC4.cAug05
Intron
Length: 3200
Transcript: CASC4.cAug05
Length: 3200
Transcript: CASC4.cAug05
Intron
Length: 5684
Transcript: CASC4.cAug05
Length: 5684
Transcript: CASC4.cAug05
Intron
Length: 329
Transcript: CASC4.cAug05
Length: 329
Transcript: CASC4.cAug05
Exon
Length: 302
Transcript: CASC4.dAug05
Length: 302
Transcript: CASC4.dAug05
Exon
Length: 59
Transcript: CASC4.dAug05
Length: 59
Transcript: CASC4.dAug05
Exon
Length: 99
Transcript: CASC4.dAug05
Length: 99
Transcript: CASC4.dAug05
Exon
Length: 171
Transcript: CASC4.dAug05
Length: 171
Transcript: CASC4.dAug05
Exon
Length: 168
Transcript: CASC4.dAug05
Length: 168
Transcript: CASC4.dAug05
Exon
Length: 101
Transcript: CASC4.dAug05
Length: 101
Transcript: CASC4.dAug05
Exon
Length: 246
Transcript: CASC4.dAug05
Length: 246
Transcript: CASC4.dAug05
Intron
Length: 10357
Transcript: CASC4.dAug05
Length: 10357
Transcript: CASC4.dAug05
Intron
Length: 22007
Transcript: CASC4.dAug05
Length: 22007
Transcript: CASC4.dAug05
Intron
Length: 1017
Transcript: CASC4.dAug05
Length: 1017
Transcript: CASC4.dAug05
Intron
Length: 21910
Transcript: CASC4.dAug05
Length: 21910
Transcript: CASC4.dAug05
Intron
Length: 10281
Transcript: CASC4.dAug05
Length: 10281
Transcript: CASC4.dAug05
Intron
Length: 1077
Transcript: CASC4.dAug05
Length: 1077
Transcript: CASC4.dAug05
Reaction
Expected peak: 295
Associated peak: 295,296,297,298,299
Repeated 51 time
Molarity: 12.13M
Forward: CASC4.F1
Reverse: NM_177974-R1
Expected peak: 295
Associated peak: 295,296,297,298,299
Repeated 51 time
Molarity: 12.13M
Forward: CASC4.F1
Reverse: NM_177974-R1
Exon
Length: 626
Transcript: CASC4.eAug05
Length: 626
Transcript: CASC4.eAug05
Exon
Length: 55
Transcript: CASC4.eAug05
Length: 55
Transcript: CASC4.eAug05
Exon
Length: 103
Transcript: CASC4.eAug05
Length: 103
Transcript: CASC4.eAug05
Exon
Length: 145
Transcript: CASC4.eAug05
Length: 145
Transcript: CASC4.eAug05
Exon
Length: 81
Transcript: CASC4.eAug05
Length: 81
Transcript: CASC4.eAug05
Exon
Length: 358
Transcript: CASC4.eAug05
Length: 358
Transcript: CASC4.eAug05
Intron
Length: 33608
Transcript: CASC4.eAug05
Length: 33608
Transcript: CASC4.eAug05
Intron
Length: 5665
Transcript: CASC4.eAug05
Length: 5665
Transcript: CASC4.eAug05
Intron
Length: 8975
Transcript: CASC4.eAug05
Length: 8975
Transcript: CASC4.eAug05
Intron
Length: 329
Transcript: CASC4.eAug05
Length: 329
Transcript: CASC4.eAug05
Intron
Length: 10225
Transcript: CASC4.eAug05
Length: 10225
Transcript: CASC4.eAug05
Exon
Length: 619
Transcript: CASC4.fAug05
Length: 619
Transcript: CASC4.fAug05
Exon
Length: 1299
Transcript: CASC4.fAug05
Length: 1299
Transcript: CASC4.fAug05
Intron
Length: 17881
Transcript: CASC4.fAug05
Length: 17881
Transcript: CASC4.fAug05
Exon
Length: 664
Transcript: CASC4.gAug05
Length: 664
Transcript: CASC4.gAug05
Exon
Length: 103
Transcript: CASC4.gAug05
Length: 103
Transcript: CASC4.gAug05
Exon
Length: 91
Transcript: CASC4.gAug05
Length: 91
Transcript: CASC4.gAug05
Exon
Length: 145
Transcript: CASC4.gAug05
Length: 145
Transcript: CASC4.gAug05
Exon
Length: 81
Transcript: CASC4.gAug05
Length: 81
Transcript: CASC4.gAug05
Exon
Length: 275
Transcript: CASC4.gAug05
Length: 275
Transcript: CASC4.gAug05
Intron
Length: 39328
Transcript: CASC4.gAug05
Length: 39328
Transcript: CASC4.gAug05
Intron
Length: 3200
Transcript: CASC4.gAug05
Length: 3200
Transcript: CASC4.gAug05
Intron
Length: 5684
Transcript: CASC4.gAug05
Length: 5684
Transcript: CASC4.gAug05
Intron
Length: 329
Transcript: CASC4.gAug05
Length: 329
Transcript: CASC4.gAug05
Intron
Length: 7557
Transcript: CASC4.gAug05
Length: 7557
Transcript: CASC4.gAug05
Exon
Length: 179
Transcript: CASC4.shed1.aAug05
Length: 179
Transcript: CASC4.shed1.aAug05
Exon
Length: 665
Transcript: CASC4.shed2.aAug05
Length: 665
Transcript: CASC4.shed2.aAug05
Exon
Length: 552
Transcript: CASC4.shed3.aAug05
Length: 552
Transcript: CASC4.shed3.aAug05
CASC4.R1
TTCTTCCTATAGTCCTGAAGCTGG
TTCTTCCTATAGTCCTGAAGCTGG
NM_177974-R1
GCAGGATCCATTTGAAGCTC
GCAGGATCCATTTGAAGCTC
CASC4.F1
GCTCAAACTTGGACAGTGAACC
GCTCAAACTTGGACAGTGAACC