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LGFUS Public Data
Identification of alternative splicing markers for breast cancer
2. Breast Validation Screen
Transcript map
: MRPS11
Exon
Length: 330
Transcript: MRPS11.aAug05
Length: 330
Transcript: MRPS11.aAug05
Exon
Length: 117
Transcript: MRPS11.aAug05
Length: 117
Transcript: MRPS11.aAug05
Exon
Length: 99
Transcript: MRPS11.aAug05
Length: 99
Transcript: MRPS11.aAug05
Exon
Length: 130
Transcript: MRPS11.aAug05
Length: 130
Transcript: MRPS11.aAug05
Exon
Length: 66
Transcript: MRPS11.aAug05
Length: 66
Transcript: MRPS11.aAug05
Exon
Length: 1143
Transcript: MRPS11.aAug05
Length: 1143
Transcript: MRPS11.aAug05
Intron
Length: 125
Transcript: MRPS11.aAug05
Length: 125
Transcript: MRPS11.aAug05
Intron
Length: 4602
Transcript: MRPS11.aAug05
Length: 4602
Transcript: MRPS11.aAug05
Intron
Length: 2384
Transcript: MRPS11.aAug05
Length: 2384
Transcript: MRPS11.aAug05
Intron
Length: 1749
Transcript: MRPS11.aAug05
Length: 1749
Transcript: MRPS11.aAug05
Intron
Length: 817
Transcript: MRPS11.aAug05
Length: 817
Transcript: MRPS11.aAug05
Exon
Length: 87
Transcript: MRPS11.bAug05
Length: 87
Transcript: MRPS11.bAug05
Exon
Length: 114
Transcript: MRPS11.bAug05
Length: 114
Transcript: MRPS11.bAug05
Exon
Length: 99
Transcript: MRPS11.bAug05
Length: 99
Transcript: MRPS11.bAug05
Exon
Length: 130
Transcript: MRPS11.bAug05
Length: 130
Transcript: MRPS11.bAug05
Exon
Length: 66
Transcript: MRPS11.bAug05
Length: 66
Transcript: MRPS11.bAug05
Exon
Length: 392
Transcript: MRPS11.bAug05
Length: 392
Transcript: MRPS11.bAug05
Intron
Length: 128
Transcript: MRPS11.bAug05
Length: 128
Transcript: MRPS11.bAug05
Intron
Length: 4602
Transcript: MRPS11.bAug05
Length: 4602
Transcript: MRPS11.bAug05
Intron
Length: 2384
Transcript: MRPS11.bAug05
Length: 2384
Transcript: MRPS11.bAug05
Intron
Length: 1749
Transcript: MRPS11.bAug05
Length: 1749
Transcript: MRPS11.bAug05
Intron
Length: 817
Transcript: MRPS11.bAug05
Length: 817
Transcript: MRPS11.bAug05
Exon
Length: 77
Transcript: MRPS11.cAug05
Length: 77
Transcript: MRPS11.cAug05
Exon
Length: 1238
Transcript: MRPS11.cAug05
Length: 1238
Transcript: MRPS11.cAug05
Exon
Length: 99
Transcript: MRPS11.cAug05
Length: 99
Transcript: MRPS11.cAug05
Exon
Length: 130
Transcript: MRPS11.cAug05
Length: 130
Transcript: MRPS11.cAug05
Exon
Length: 66
Transcript: MRPS11.cAug05
Length: 66
Transcript: MRPS11.cAug05
Exon
Length: 392
Transcript: MRPS11.cAug05
Length: 392
Transcript: MRPS11.cAug05
Intron
Length: 125
Transcript: MRPS11.cAug05
Length: 125
Transcript: MRPS11.cAug05
Intron
Length: 3481
Transcript: MRPS11.cAug05
Length: 3481
Transcript: MRPS11.cAug05
Intron
Length: 2384
Transcript: MRPS11.cAug05
Length: 2384
Transcript: MRPS11.cAug05
Intron
Length: 1749
Transcript: MRPS11.cAug05
Length: 1749
Transcript: MRPS11.cAug05
Intron
Length: 817
Transcript: MRPS11.cAug05
Length: 817
Transcript: MRPS11.cAug05
Exon
Length: 295
Transcript: MRPS11.dAug05
Length: 295
Transcript: MRPS11.dAug05
Exon
Length: 99
Transcript: MRPS11.dAug05
Length: 99
Transcript: MRPS11.dAug05
Exon
Length: 130
Transcript: MRPS11.dAug05
Length: 130
Transcript: MRPS11.dAug05
Exon
Length: 66
Transcript: MRPS11.dAug05
Length: 66
Transcript: MRPS11.dAug05
Exon
Length: 334
Transcript: MRPS11.dAug05
Length: 334
Transcript: MRPS11.dAug05
Intron
Length: 4602
Transcript: MRPS11.dAug05
Length: 4602
Transcript: MRPS11.dAug05
Intron
Length: 2384
Transcript: MRPS11.dAug05
Length: 2384
Transcript: MRPS11.dAug05
Intron
Length: 1749
Transcript: MRPS11.dAug05
Length: 1749
Transcript: MRPS11.dAug05
Intron
Length: 817
Transcript: MRPS11.dAug05
Length: 817
Transcript: MRPS11.dAug05
Exon
Length: 54
Transcript: MRPS11.eAug05
Length: 54
Transcript: MRPS11.eAug05
Exon
Length: 117
Transcript: MRPS11.eAug05
Length: 117
Transcript: MRPS11.eAug05
Exon
Length: 79
Transcript: MRPS11.eAug05
Length: 79
Transcript: MRPS11.eAug05
Exon
Length: 130
Transcript: MRPS11.eAug05
Length: 130
Transcript: MRPS11.eAug05
Exon
Length: 66
Transcript: MRPS11.eAug05
Length: 66
Transcript: MRPS11.eAug05
Exon
Length: 392
Transcript: MRPS11.eAug05
Length: 392
Transcript: MRPS11.eAug05
Intron
Length: 125
Transcript: MRPS11.eAug05
Length: 125
Transcript: MRPS11.eAug05
Intron
Length: 4622
Transcript: MRPS11.eAug05
Length: 4622
Transcript: MRPS11.eAug05
Intron
Length: 2384
Transcript: MRPS11.eAug05
Length: 2384
Transcript: MRPS11.eAug05
Intron
Length: 1749
Transcript: MRPS11.eAug05
Length: 1749
Transcript: MRPS11.eAug05
Intron
Length: 817
Transcript: MRPS11.eAug05
Length: 817
Transcript: MRPS11.eAug05
Exon
Length: 330
Transcript: MRPS11.fAug05
Length: 330
Transcript: MRPS11.fAug05
Exon
Length: 117
Transcript: MRPS11.fAug05
Length: 117
Transcript: MRPS11.fAug05
Exon
Length: 130
Transcript: MRPS11.fAug05
Length: 130
Transcript: MRPS11.fAug05
Exon
Length: 66
Transcript: MRPS11.fAug05
Length: 66
Transcript: MRPS11.fAug05
Exon
Length: 392
Transcript: MRPS11.fAug05
Length: 392
Transcript: MRPS11.fAug05
Intron
Length: 125
Transcript: MRPS11.fAug05
Length: 125
Transcript: MRPS11.fAug05
Intron
Length: 7085
Transcript: MRPS11.fAug05
Length: 7085
Transcript: MRPS11.fAug05
Intron
Length: 1749
Transcript: MRPS11.fAug05
Length: 1749
Transcript: MRPS11.fAug05
Intron
Length: 817
Transcript: MRPS11.fAug05
Length: 817
Transcript: MRPS11.fAug05
Exon
Length: 60
Transcript: MRPS11.gAug05
Length: 60
Transcript: MRPS11.gAug05
Exon
Length: 114
Transcript: MRPS11.gAug05
Length: 114
Transcript: MRPS11.gAug05
Exon
Length: 490
Transcript: MRPS11.gAug05
Length: 490
Transcript: MRPS11.gAug05
Exon
Length: 130
Transcript: MRPS11.gAug05
Length: 130
Transcript: MRPS11.gAug05
Exon
Length: 391
Transcript: MRPS11.gAug05
Length: 391
Transcript: MRPS11.gAug05
Intron
Length: 128
Transcript: MRPS11.gAug05
Length: 128
Transcript: MRPS11.gAug05
Intron
Length: 4211
Transcript: MRPS11.gAug05
Length: 4211
Transcript: MRPS11.gAug05
Intron
Length: 2384
Transcript: MRPS11.gAug05
Length: 2384
Transcript: MRPS11.gAug05
Intron
Length: 2632
Transcript: MRPS11.gAug05
Length: 2632
Transcript: MRPS11.gAug05
Reaction
Expected peak: 212
Associated peak: 220,221,222,223,224,225
Repeated 51 time
Molarity: 2.56M
Forward: MRPS11.u.f.8
Reverse: MRPS11.u.r.10
Expected peak: 212
Associated peak: 220,221,222,223,224,225
Repeated 51 time
Molarity: 2.56M
Forward: MRPS11.u.f.8
Reverse: MRPS11.u.r.10
Reaction
Expected peak: 317
Associated peak: 324,326,327,328,329,330,331,332,333
Repeated 51 time
Molarity: 1.05M
Forward: MRPS11.u.f.6
Reverse: MRPS11.u.r.10
Expected peak: 317
Associated peak: 324,326,327,328,329,330,331,332,333
Repeated 51 time
Molarity: 1.05M
Forward: MRPS11.u.f.6
Reverse: MRPS11.u.r.10
Exon
Length: 43
Transcript: MRPS11.hAug05
Length: 43
Transcript: MRPS11.hAug05
Exon
Length: 117
Transcript: MRPS11.hAug05
Length: 117
Transcript: MRPS11.hAug05
Exon
Length: 99
Transcript: MRPS11.hAug05
Length: 99
Transcript: MRPS11.hAug05
Exon
Length: 68
Transcript: MRPS11.hAug05
Length: 68
Transcript: MRPS11.hAug05
Exon
Length: 66
Transcript: MRPS11.hAug05
Length: 66
Transcript: MRPS11.hAug05
Exon
Length: 391
Transcript: MRPS11.hAug05
Length: 391
Transcript: MRPS11.hAug05
Intron
Length: 125
Transcript: MRPS11.hAug05
Length: 125
Transcript: MRPS11.hAug05
Intron
Length: 4602
Transcript: MRPS11.hAug05
Length: 4602
Transcript: MRPS11.hAug05
Intron
Length: 2446
Transcript: MRPS11.hAug05
Length: 2446
Transcript: MRPS11.hAug05
Intron
Length: 1749
Transcript: MRPS11.hAug05
Length: 1749
Transcript: MRPS11.hAug05
Intron
Length: 817
Transcript: MRPS11.hAug05
Length: 817
Transcript: MRPS11.hAug05
Exon
Length: 330
Transcript: MRPS11.iAug05
Length: 330
Transcript: MRPS11.iAug05
Exon
Length: 392
Transcript: MRPS11.iAug05
Length: 392
Transcript: MRPS11.iAug05
Intron
Length: 817
Transcript: MRPS11.iAug05
Length: 817
Transcript: MRPS11.iAug05
Exon
Length: 75
Transcript: MRPS11.jAug05
Length: 75
Transcript: MRPS11.jAug05
Exon
Length: 117
Transcript: MRPS11.jAug05
Length: 117
Transcript: MRPS11.jAug05
Exon
Length: 271
Transcript: MRPS11.jAug05
Length: 271
Transcript: MRPS11.jAug05
Intron
Length: 125
Transcript: MRPS11.jAug05
Length: 125
Transcript: MRPS11.jAug05
Intron
Length: 4330
Transcript: MRPS11.jAug05
Length: 4330
Transcript: MRPS11.jAug05
Reaction
Expected peak: 93
Associated peak: 93,94,95,96,97
Repeated 51 time
Molarity: 30.55M
Forward: MRPS11.u.f.8
Reverse: MRPS11.u.r.10
Expected peak: 93
Associated peak: 93,94,95,96,97
Repeated 51 time
Molarity: 30.55M
Forward: MRPS11.u.f.8
Reverse: MRPS11.u.r.10
Reaction
Expected peak: 201
Associated peak: 212,213,214,215,216,223
Repeated 51 time
Molarity: 5.97M
Forward: MRPS11.u.f.6
Reverse: MRPS11.u.r.10
Expected peak: 201
Associated peak: 212,213,214,215,216,223
Repeated 51 time
Molarity: 5.97M
Forward: MRPS11.u.f.6
Reverse: MRPS11.u.r.10
Exon
Length: 105
Transcript: MRPS11.kAug05
Length: 105
Transcript: MRPS11.kAug05
Exon
Length: 749
Transcript: MRPS11.kAug05
Length: 749
Transcript: MRPS11.kAug05
Intron
Length: 128
Transcript: MRPS11.kAug05
Length: 128
Transcript: MRPS11.kAug05
Exon
Length: 1479
Transcript: MRPS11.shed1.aAug05
Length: 1479
Transcript: MRPS11.shed1.aAug05
Exon
Length: 580
Transcript: MRPS11.shed2.aAug05
Length: 580
Transcript: MRPS11.shed2.aAug05
MRPS11.u.r.10
CTTTCCGCTATGAGAAGGGA
CTTTCCGCTATGAGAAGGGA
MRPS11.u.f.6
CCTGCGGTCCTGGACTT
CCTGCGGTCCTGGACTT
MRPS11.u.f.8
GAAAGTTGAACAGAACGCGG
GAAAGTTGAACAGAACGCGG